Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Sivay (2020)
Title HIV drug resistance, phylogenetic analysis, and superinfection among men who have sex with men and transgender women in sub-Saharan Africa: HPTN 075.
Citation Clin Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 136
NumPts 136
Subtype C, A, B, CRF02_AG, D, G, CRF49_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 136 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
ENR_1 ENR_1 None    L10LI, I13V, E35D, M36I, R41K, R57RK, H69K, L89M  
ENR_10 ENR_10 None    T12PS, I15V, L19I, E35D, M36I, R41K, K45R, I62IV, L63P, H69T, V82I, L89M, I93L  
ENR_100 ENR_100 None    T12S, I15V, G16E, L19I, E35D, M36I, R41K, K45R, L63V, H69K, T74S, L89M, I93L  
ENR_11 ENR_11 None    L10M, V11I, T12N, I15IV, L19T, K20KMR, M36I, P39A, R41K, R57K, I62V, L63Q, H69K, A71T, I93L  
ENR_12 ENR_12 None    I15V, M36I, R41K, L63P, H69K, I93L  
ENR_13 ENR_13 None    I13V, K20I, M36I, R41K, L63P, I64L, C67Y, H69K, L89M  
ENR_14 ENR_14 None    T12S, K14R, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
ENR_15 ENR_15 None    I13V, I15V, G16E, L19T, K20R, M36I, R41K, H69K, L89M, I93L  
ENR_16 ENR_16 None    T12APS, K14KR, I15V, L19T, M36I, N37D, R41N, D60E, L63P, H69K, L89M, I93L  
ENR_17 ENR_17 None    T12S, I15V, L19I, K20R, M36I, R41K, R57K, Q61H, L63T, I64M, H69K, L89M, I93L  
ENR_18 ENR_18 None    T12S, I15IV, L19T, K20R, E35D, M36I, R41K, D60E, Q61D, L63P, H69K, I72IV, L89LM, I93L  
ENR_19 ENR_19 None    I15V, L19T, M36I, L63AT, H69K, L89M, I93L  
ENR_2 ENR_2 None    K20R, M36I, R41K, H69K, L89M, I93L  
ENR_20 ENR_20 None    I15V, L19I, M36I, R41K, H69K, I93L  
ENR_21 ENR_21 None    T12S, Q18E, L19IT, K20R, E35D, M36I, R41K, R57K, L63P, C67Y, H69K, I72IV, L89M, I93L  
ENR_22 ENR_22 None    L10I, T12S, K14R, I15V, G16E, L19V, K20R, M36I, N37Q, P39S, R41K, H69K, K70R, L89M  
ENR_23 ENR_23 None    T12S, I15V, L19I, E35D, M36I, R41N, K45R, R57K, L63P, I64L, H69K, L89M, I93L  
ENR_24 ENR_24 None    T12S, K14R, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
ENR_25 ENR_25 None    T12S, K14R, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
ENR_26 ENR_26 None    T12S, I15V, L19I, M36I, R41K, L63LP, H69K, L89M, I93L  
ENR_27 ENR_27 None    T12S, K14R, I15V, L19I, K20R, N37S, R41K, L63P, H69K, V77I, L89M, I93L  
ENR_28 ENR_28 None    I15V, L19T, M36I, R41K, L63P, H69K, I93L  
ENR_29 ENR_29 None    K14R, I15V, L63A, V77I  
ENR_3 ENR_3 None    I13V, K14KR, I15V, E35D, M36I, R41K, H69K, L89M  
ENR_30 ENR_30 None    T12S, K14KR, I15IV, L19I, K20KR, M36I, R41K, L63PS, H69K, L89M, I93L  
ENR_31 ENR_31 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70Q, V82I, L89M, I93L  
ENR_32 ENR_32 None    T12S, I15V, G16E, L19I, M36I, R41K, D60E, G68GE, H69K, K70KE, I72X, L89I, I93L, L97I  
ENR_33 ENR_33 None    L10LI, T12X, L19I, E35D, M36I, L63P, H69K, I72V, T74S, V77I, V82I, L89M, I93L  
ENR_34 ENR_34 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
ENR_35 ENR_35 None    T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89I  
ENR_36 ENR_36 None    T12S, I15V, L19I, K20R, E35D, M36I, N37D, R41K, R57K, L63V, H69K, T74S, I93L  
ENR_37 ENR_37 None  M46MI  T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89I  
ENR_38 ENR_38 None    T12S, K14N, I15V, L19T, K20R, E35D, M36I, R41K, I62V, L63V, H69K, T74S, L89M, I93L  
ENR_39 ENR_39 None    T12S, L19V, K20R, E35D, M36I, R41K, L63V, H69K, L89I  
ENR_4 ENR_4 None    E35D, M36I, N37DE, R41K, R57RK, L63X, H69K, L89M, I93L  
ENR_40 ENR_40 None    T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89I  
ENR_41 ENR_41 None    L10IMV, I15IV, L19LI, M36MI, N37NS, R41K, I62IV, L63X, H69Q, V77I, L89M, I93L  
ENR_42 ENR_42 None    T12S, I15IV, L19IT, N37S, R41K, L63P, H69K, L89M, I93L  
ENR_43 ENR_43 None    T12S, I15V, L19I, K20KR, E35D, M36I, R41K, L63AV, H69K, T74S, L89M, I93L  
ENR_44 ENR_44 None    T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
ENR_45 ENR_45 None    T12P, I15V, L19IT, K20R, E35D, M36I, R41K, L63V, H69K, L89I  
ENR_46 ENR_46 None    T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63V, H69K, L89I  
ENR_47 ENR_47 None    T12S, I15V, L19I, M36I, N37ND, R41K, D60E, L63P, H69K, L89I, I93L  
ENR_48 ENR_48 None    T12S, I15V, Q18E, L19T, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
ENR_49 ENR_49 None    L10I, T12S, I13V, K14KR, I15IV, L19IT, M36I, N37D, D60E, I64V, H69K, I93L  
ENR_5 ENR_5 None    I13V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, H69K, L89M  
ENR_50 ENR_50 None    T12S, I15V, L19I, R41K, K43KR, L63PS, H69K, V77I, L89M, I93L  
ENR_51 ENR_51 None    T12S, I15V, L19T, E35D, M36I, R41K, L63A, H69K, T74S, L89M, I93L  
ENR_52 ENR_52 None    T12S, I15V, L19I, K20R, M36I, N37NS, R41K, L63P, C67CY, H69K, K70KR, V77I, L89LM, I93L  
ENR_53 ENR_53 None    G16E, G17D, L19I, E35D, M36I, R41K, L63S, H69K, L89M, I93L  
ENR_54 ENR_54 None    T12S, K14R, I15V, L19I, K20R, M36I, N37S, R41RK, L63PT, I64IM, H69K, V77I, V82VI, L89M, I93L  
ENR_55 ENR_55 None    I15V, L19I, E35D, N37S, R41K, L63V, H69K, T74S, V77I, L89M, I93L  
ENR_56 ENR_56 None    T12S, I15V, L19T, N37S, P39PT, R41K, L63P, H69K, V77I, L89M, I93L  
ENR_57 ENR_57 None    T12S, I15V, L19I, N37NS, R41K, H69K, K70KR, T74S, V77I, V82VI, L89M, I93L  
ENR_58 ENR_58 None    T12S, L19IM, M36I, R41K, D60DE, Q61N, L63Q, H69K, K70KR, L89M, I93L  
ENR_59 ENR_59 None    I13V, K14KR, I15V, L19T, K20R, M36I, R41N, H69K, L89M, I93L  
ENR_6 ENR_6 None    I13V, K20R, E35D, M36I, N37DE, R41K, K45R, R57K, L63LP, H69K, K70KR, I72IM, L89M  
ENR_60 ENR_60 None    T12S, I15V, L19I, E35D, M36I, K45KR, L63P, H69K, K70R, V82I, L89M, I93L  
ENR_61 ENR_61 None    K14T, I15V, L19T, K20R, E35D, M36I, R41K, K45R, R57K, D60E, Q61E, H69K, L89M, I93L, L97I  
ENR_62 ENR_62 None    I15V, L19T, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
ENR_63 ENR_63 None    K14R, I15V, K20R, E35D, M36I, N37D, R41K, D60N, Q61D, I62V, C67E, H69K, I72IV, V82I, L89M, I93L  
ENR_64 ENR_64 None    T12P, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89M, I93L  
ENR_65 ENR_65 None    T12TA, K14KR, I15V, L19I, L38M, R41K, L63T, H69K, L89M, I93L  
ENR_66 ENR_66 None    I15V, L19T, M36I, R41K, L63P, H69K, I93L  
ENR_67 ENR_67 None    T12S, I15V, L19I, E35D, M36I, R41K, L63X, H69K, V82I, L89M, I93L  
ENR_68 ENR_68 None    T12S, L19T, N37S, R41K, K45R, R57K, L63LP, I66L, H69K, L89M, I93L  
ENR_69 ENR_69 None    L19I, M36I, R41K, L63P, H69Q, L89LIM, I93L  
ENR_7 ENR_7 None    I13V, K14R, E35D, M36I, N37D, R41K, R57K, H69K, L89M  
ENR_70 ENR_70 None    T12S, I15V, L19I, N37S, R41K, D60E, I62V, L63P, H69K, V75I, L89M, I93L  
ENR_71 ENR_71 None    T12S, I15V, L19I, M36I, N37S, R41K, R57RK, H69K, L89M, I93L  
ENR_72 ENR_72 None    I15V, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
ENR_73 ENR_73 None    I13V, Q18H, L33LI, R41K, L63P, I64V, E65D, K70R  
ENR_74 ENR_74 None   Q58E T12TS, K14KR, Q18L, L19I, E35D, M36I, D60E, I62V, L63Q, I64LV, H69K, V82I, L89M, I93L  
ENR_75 ENR_75 None    I15V, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
ENR_76 ENR_76 None    I3IV, T12S, I15V, L19I, M36I, R41P, L63P, H69K, L89M, I93L D60H 
ENR_77 ENR_77 None    K14T, I15V, L19T, K20R, E35D, M36I, R41K, H69K, L89M, I93L E21EV 
ENR_78 ENR_78 None    T12S, I15V, L19T, K20R, E35D, M36I, R41K, L63LP, I64V, H69K, I93L  
ENR_79 ENR_79 None    K14KR, I15V, G16GE, L19LS, K20R, E35D, M36I, R41K, R57K, H69K, L89M, I93L  
ENR_8 ENR_8 None    K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M  
ENR_80 ENR_80 None    T12S, K14N, I15V, L19I, M36I, N37ND, R41RK, D60E, Q61N, L63T, H69K, I72IV, I93L  
ENR_81 ENR_81 None    T12S, L19IV, K20R, M36I, R41K, H69K, L89M, I93L  
ENR_82 ENR_82 None   M46MV T12TS, I13IV, I15V, G17X, L19LI, K20KM, E35DN, M36I, P39S, R41K, K55KN, D60DE, Q61DH, L63PST, H69K, L89M, I93L  
ENR_83 ENR_83 None    T12P, I15V, L19I, E35D, M36I, D60E, L63P, H69K, K70KQ, I72V, I93L  
ENR_84 ENR_84 None    L10M, T12S, K14R, I15V, L19I, E35D, M36I, R41K, K45KR, Q61QH, L63T, H69K, I85V, I93L  
ENR_85 ENR_85 None    K20R, M36I, R41K, H69K, L89M, I93L  
ENR_86 ENR_86 None    I15V, L19I, E35ED, M36IL, N37S, R41K, K43KR, K45KR, L63A, H69K, I72V, V75VI, I93L  
ENR_87 ENR_87 None    T12S, K14I, I15V, L19V, K20R, E35D, M36I, R41K, D60E, L63V, H69K, V82VI, L89M, I93L  
ENR_88 ENR_88 None    T12S, I15V, L19I, E35D, M36I, R41K, L63P, I64L, H69K, I93L  
ENR_89 ENR_89 None    T12S, I13IV, I15IV, L19I, K20KR, E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93L  
ENR_9 ENR_9 None    I15V, L19T, E35D, M36I, N37E, H69K, L89M, I93L  
ENR_90 ENR_90 None    T12S, I15V, G16E, L19T, K20M, M36I, R41K, L63H, H69K, I93L  
ENR_91 ENR_91 None    T12S, I15V, L19I, K20R, E35D, M36I, N37D, R41K, H69K, T74TS, L89M, I93L  
ENR_92 ENR_92 None    T12TS, I15IV, L19I, M36I, N37D, I62IV, L63A, H69K, I93L  
ENR_93 ENR_93 None    T12S, I15V, L19I, M36I, R41K, K45R, H69K, T74S, L89M, I93L  
ENR_94 ENR_94 None    T12S, I15V, L19T, E35D, M36I, R41K, D60E, Q61E, L63X, H69K, V82I, L89M, I93L  
ENR_95 ENR_95 None    I15V, L19T, N37S, R41K, L63S, H69K, V77I, I93L  
ENR_96 ENR_96 None    T12PS, I15V, L19V, K20R, M36I, P39Q, R41K, K43KR, I62IV, L63LS, H69K, L89I, I93L  
ENR_97 ENR_97 None    I15V, L19T, M36I, R41K, L63P, H69K, L89M, I93L  
ENR_98 ENR_98 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, R57K, Q61E, I62V, L63Q, I64L, E65D, H69K, L89M, I93L  
ENR_99 ENR_99 None    T12PS, I15V, G16E, L19T, K20M, M36IV, R41K, L63H, H69K, I93L