Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Hebberecht (2020)
Title High frequency of new recombinant forms in HIV-1 transmission networks demonstrated by full genome sequencing.
Citation Infect Genet Evol
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 40
NumPts 40
Subtype B, F, A, CRF02_AG, CRF01_AE

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
None    I13V, E35D, M36I, R41K, L63P, H69K, L89M  
None    L10V, T12X, I15V, L19I, K20R, M36I, N37S, R41K, I62V, L63PS, C67CY, H69Q, L89M, I93L  
None    I13V, E35D, M36I, R41K, L63P, H69K, K70R, I72V, L89M  
None    L10I, K14R, G16E, E35D, M36I, R41K, G68E, H69R, L89M, I93L  
DA DA None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
DB DB None    I13V, K14R, I15V, G16E, K20I, E35D, M36I, R41K, I64L, H69K, L89M  
DC DC None    L10LI, I15V, G16GE, L19LI, E35D, N37D, I62V, L63H, I72IV, I93L  
DD DD None    L10I, I15V, G16E, E35D, N37T, I62V, L63H, I93L  
DE DE None    N37S, R41K, I62V, L63P, I93L  
DF DF None    Q7E, E35D, L63P, V77I, I93L  
DG DG None    L19V, D60E, Q61E, L63P, V77I, I93L  
DH DH None    I3IF, R8RQ, I15V, N37C, R41K, Y59YH, I64V, I72T A22AP, L33LS, G40GA, G49GA, I50IT, R57RT, Q61QP 
DI DI None    L10V, K14R, I15V, G16E, E35D, M36I, R41K, G68E, H69R, L89M, I93L  
DJ DJ None    L10V, K14R, I15V, G16E, E35D, M36I, R41K, G68E, H69R, L89M, I93L  
DK DK None    L10M, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M, I93L  
DL DL None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M  
DM DM None    L10I, K14R, I15IV, R41K, I93L  
DN DN None    T12A, K14R, I15V, L19F, E35D, M36I, R41K, R57K, I62V, L63T, E65D, T74S, L89M  
DO DO None    N37T, L63P, I64V, V77I, I93L  
DP DP None    I15V, G17GD, C67S, V77I  
DQ DQ None    T12PS, I13IV, N37M, R41K, D60E, I62V, L63P, A71T, I72M, V77I  
DR DR None    T12S, E35D, N37IT, R41K, K45KR, D60E, I62V, L63P, A71T, I72V, V77I, Q92R  
DS DS None    E35D, P39PS, R41K, L63P, A71T, V77VIM, I93L  
DT DT None    I13V, E35D, M36I, R41K, L63P, H69K, L89M  
DU DU None    I13V, E35D, M36I, R41K, L63P, H69K, K70R, I72V, L89M  
DV DV None    I13V, K14R, I15V, N37D, R57K, D60E, L63P, C95W  
DW DW None    I13V, K14R, M36MI, N37D, R57K, D60E, L63P  
DX DX None    T12P, I13V, G16E, M36I, P39PL, R41RK, I62V, L63H, V82I  
DY DY None    Q2E, E35D, N37D, R57K, D60E, Q61E, L63P  
DZ DZ None    T12D, K14R, I15V, L19I, K20R, E35D, M36I, N37D, R41K, R57K, I62V, L63A, E65D, T74S, L89M  
EA EA None    T12D, K14R, I15V, L19I, K20R, E35D, M36I, N37D, R41K, R57K, I62V, L63A, E65D, T74S, L89M  
EB EB None    T12D, K14R, I15V, L19I, K20R, E35D, M36I, N37D, R41K, R57K, I62V, L63T, E65D, T74S, L89M  
EC EC None    T12D, K14R, I15V, L19I, K20R, E35D, M36I, N37D, R41K, R57K, I62V, L63T, E65D, T74S, L89M  
ED ED None    L19LI, M36I, N37D, Y59F, L63P, A71T, I93L  
EE EE None    L33I, M36IT, N37D, P39PS, Y59F, L63P, A71T, I93L  
EF EF None    T12S, I13V, L19I, E35D, N37T, L63P  
EG EG None    L10V, T12D, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, K70R, I72T, L89M  
EH EH None    L10V, T12P, I15V, L19I, K20R, M36I, N37A, I62V, L63X, H69Q, L89M, I93L  
EI EI None    E35D, N37A, D60E, L63P  
EJ EJ None    E35D, N37A, R41K, D60E, L63P, I64IV