Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Makwaga (2020)
Title Prevalence of human immunodeficiency virus-1 drug-resistant mutations among adults on first- and second-line antiretroviral therapy in a resource-limited health facility in Busia County, Kenya.
Citation Pan Afr Med J
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 50
NumPts 50
Subtype A, D, C, B

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
001K 001K RTV, ATV 52 G48V, I54V, V82A K43T, F53L L10I, I13V, K14R, K20I, E35D, M36I, N37D, R41K, R57K, I62V, L63P, H69K, K70R, I72V, T74A, L89M  
02k 02k None    L10I, I13V, E35D, M36I, R41K, R57K, L63M, H69K, L89M  
03k 03k RTV, ATV 52   I13V, M36I, R57K, L63P, I64V  
04k 04k None    I13V, M36I, R41K, L63C, I64V, H69Y  
05k 05k None    I13V, M36I, R41K, I64V  
06k 06k RTV, ATV 52   L19I, E35D, M36I, R41K, R57K, L63T, H69K, L89M  
07k 07k RTV, ATV 52   I13V, M36I, R57K, L63P, I64V  
08k 08k None    L10V, K14R, I15V, G16E, K20R, E35D, M36I, P39S, R41K, D60E, I62V, H69K, L89M  
09k 09k None    I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
10k 10k None    I13V, M36I, N37D, R41K, L63Q, I64V, E65D  
11k 11k None    I13V, K14R, E35D, M36I, N37E, R41K, R57K, D60E, H69K, L89M  
12k 12k RTV, ATV 52  K20T L10I, I13V, I15V, G16E, M36I, R41K, L63T, H69K, L89M  
13k 13k None    I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89I  
14k 14k None   F53L I13V, K20R, E35D, M36I, R41K, D60E, I62V, H69K, L89M  
15k 15k None    E35D, M36I, R41K, R57K, H69K, L89M  
16k 16k RTV, ATV 52   L10I, I13V, G16E, K20R, E35D, M36I, R41K, L63S, H69K, L89M  
17k 17k RTV, ATV 52   I13V, E35D, M36I, R41K, K45R, L63P, H69K, L89M  
18k 18k None    T12S, I15V, L19I, M36I, N37K, R41N, H69K, L89M, I93L  
19k 19k None    E35D, M36I, R41K, R57K, H69K, L89M  
20k 20k None    I15V, G16E, K20R, M36I, P39Q, R41K, D60E, I62V, L63V, I72V  
21k 21k None    I13V, R41K, D60E, L63P, I64V, V77I  
22k 22k None    K14R, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
23k 23k RTV, ATV 52   K14R, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
24k 24k None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
25k 25k None    I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
26k 26k None    G16E, K20R, E35D, M36I, P39S, R41K, K45R, R57K, H69K, L89M  
27k 27k None    I13V, E35D, M36I, R41K, K43R, L63S, H69K, L89M  
28k 28k LPV 52 I54V, V82A L10F T12S, I13V, L19P, K20R, M36I, I62V, L63P, H69Q, A71V, L89I, T91S  
29k 29k LPV 52   I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89I  
30k 30k RTV, ATV 52 G48A, I54V, V82S Q58E L10I, K20R, E35D, M36I, R41K, I62V, L63P, A71V  
31k 31k None  I54V  L10I, I13V, K14R, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63S, C67Y, H69K, I72M, L89M  
32k 32k RTV, ATV 52 M46I F53L, L89T I13V, K14R, K20R, L33I, E35D, M36I, N37D, R41K, K45R, Q61G, L63P, H69K, A71V  
33k 33k RTV, ATV 52   I13V, R41K, D60E, L63P, I64V, V77I  
34k 34k None    E35H, M36I, N37D, R41K, R57K, D60E, L63P, H69K, K70R, L89M  
35K 35K None    T12P, I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, H69K, K70R, L89M  
36K 36K None   L33F I13V, E35D, M36I, R41K, R57K, H69K, L89M  
37K 37K None    T12A, I13V, I15V, G16A, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
38K 38K None    I13V, I15V, L19I, E35D, M36I, N37D, R57K, L63T, I64M, H69K, L89M  
39K 39K None    I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M  
40K 40K None    I13V, E35D, M36I, N37D, R41K, R57K, I64M, H69K, L89M  
41K 41K None    I13V, K14R, L33V, E35D, M36I, R41K, K45R, R57K, L63H, H69K, L89M  
42K 42K None    L10V, I13V, I15V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63I, H69K, L89M  
43K 43K None    L10I, K14R, K20R, E35D, M36I, N37E, R41K, C67Y, H69K, L89M  
44K 44K None    L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M  
45K 45K LPV 52   E35D, M36I, R41K, D60E, I62V, H69K, L89M  
46K 46K LPV 52   I13V, E35D, M36I, N37D, R41K, R57K, I64M, H69K, L89M, F99FS  
47K 47K None    I13V, K14R, L33V, E35D, M36I, R41K, K45R, R57K, L63H, H69K, L89M  
48K 48K None    I13V, G17D, K20R, E35D, M36I, N37D, L63P, H69K, K70R, L89M  
49K 49K None    I13V, K14R, E35D, M36I, N37D, R41K, R57K, H69K, G78R, N83H V77G 
50K 50K LPV 52   I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M