Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Keita (2020)
Title Primary resistance to antiretroviral drugs of HIV strains in Chad: a retrospective investigation by analysis of frozen dried blood spot samples.
Citation Eur J Clin Microbiol Infect Dis
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 20
NumPts 20
Subtype CRF11_cpx, D, B, CRF02_AG, CRF45_cpx, A + J, G

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
ACHMAR_2010 ACHMAR_2010 None None   E6D, V35T, K122E, D123S, T139K, I142V, T165V, Q174R, D177E, V179A, T200E, I202V, Q207E, R211K, F214L, V245Q, E248D, D250E, S251H, E291D, V292I, I293V, E297A, D324E, I329V, Q334L, G335D  
ALLSER_2001 ALLSER_2001 None None  V106I I37X, E40D, K49R, V60I, K122P, D123E, S162C, Q174K, D177E, I178L, T200A, Q207E, F214L, V245T  
ATEABA_2005 ATEABA_2005 None None  K103N K122E, D123N, I135T, S162C, Q174H, D177E, T200E, I202V, Q207E, R211K, V245K  
BINCLA_2009 BINCLA_2009 None None   E6D, V35T, K122E, D123S, T139K, I142V, T165V, Q174R, D177E, V179A, T200E, I202V, Q207E, R211K, F214L, V245Q, E248D, D250E, S251H, E291D, V292I, I293V, E297A, D324E, I329V, Q334L, G335D  
DAYDEM_2007 DAYDEM_2007 None None K65E  V60I, K64R, K122E, D123E, I135V, M164L, D177E, I178M, I195L, G196E, T200A, V245E, D250E, A272P, K277R, E297K V75E 
DIJLOU_2011 DIJLOU_2011 None None   E6D, V35T, K122E, D123S, T139K, I142V, T165V, Q174R, D177E, V179A, T200E, I202V, Q207E, R211K, F214L, V245Q, E248D, D250E, S251H, E291D, V292I, I293V, E297A, D324E, I329V, Q334L, G335D  
DJEJON_2004 DJEJON_2004 None None   T39R, D121H, K122E, I135T, S162C, Q174H, D177E, Q197E, T200K, I202V, Q207E, R211K, F214L, V245Q  
GROYOS_2012 GROYOS_2012 None None K65E  V60I, K64R, K122E, D123E, I135V, M164L, D177E, I178M, I195L, G196E, T200A, V245E, D250E, A272P, K277R, E297K V75E 
HASABD_2006 HASABD_2006 None None  V106I K49R, V60I, D123E, I135V, T139S, T165I, D177E, I178L, Q197E, Q207E, F214L, E224D, V245I  
LEMMAR_2009 LEMMAR_2009 None None   V35T, V60I, K122E, D123E, I142V, S162C, Q174H, D177E, G196E, Q207E, R211K, V245Q, D250E, A272S, K275R, T286A, P294A, E297K, G333D, Q334N Q269L 
MAHHAS_2007 MAHHAS_2007 None None   T39A, K49R, K122E, D123N, I135T, S162C, D177E, I178M, T200E, I202V, Q207K, R211K, V245K  
MASDAN_2003 MASDAN_2003 None None   V60I, I135T, K173T, Q174R, D177E, T200A, Q207E, R211K, F214L, V245Q  
NARRIC_2005 NARRIC_2005 None None  V106I K49R, V60I, D123E, I135V, T139S, T165I, D177E, I178L, Q197E, Q207E, F214L, E224D, V245I  
NEMELI_2000 NEMELI_2000 None None   V35T, V60I, K122E, D123E, I142V, S162C, Q174H, D177E, G196E, Q207E, R211K, V245Q, D250E, A272P, K275R, T286A, P294A, E297K, G333D, Q334N  
OUSMAH_1998 OUSMAH_1998 None None  V106I V60I, V118I, D123E, I135V, T139S, T165I, D177E, I178L, G196E, E204R, Q207E, F214L, V245T  
RASFLO_2003 RASFLO_2003 None None   E28G, V35T, K43R, K49R, V60I, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q  
SILJOS_2005 SILJOS_2005 None None  K103N K122E, D123N, I135T, S162C, Q174H, D177E, T200E, I202V, Q207E, R211K, V245K  
SOLLAE_2006 SOLLAE_2006 None None   E28G, V35T, T39S, S48T, V60I, D123E, S162A, K173T, Q174K, D177E, T200A, Q207A, R211K, P243Q, V245Q  
SOLLUC_2009 SOLLUC_2009 None None   E6D, V35T, K122E, D123S, T139K, I142V, T165V, Q174R, D177E, V179A, T200E, I202V, Q207E, R211K, F214L, V245Q, E248D, D250E, S251H, E291D, V292I, I293V, E297A, D324E, I329V, Q334L, G335D  
TOIRAI_2010 TOIRAI_2010 None None  V106I K49R, V60I, V118I, K122R, D123E, T139S, S162C, D177E, I178L, Q207E, F214L, V245K  

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