Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Sacks-Davis (2020)
Title Phylogenetic clustering networks among heterosexual migrants with new HIV diagnoses post-migration in Australia.
Citation PLoS One
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 702
NumPts 702
Subtype B, CRF01_AE, C, CRF02_AG, A, G, CRF07_BC, D, CRF12_BF, CRF35_AD, F, CRF18_cpx, B + F

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 702 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
VIC_HIV_1 VIC_HIV_1 None    I13V, G16GE, L33LV, E35ED, N37X, R57RK, I62IV, L63X, I64IMV, E65D, I72V, V77I  
VIC_HIV_10 VIC_HIV_10 None    L10LV, I13V, G16E, E35D, M36I, R41K, K55R, H69K, K70KR, L89M  
VIC_HIV_100 VIC_HIV_100 None    L5LF, T12S, L19I, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
VIC_HIV_11 VIC_HIV_11 None    K14R, E35D, R41K, I62V, L63P, A71T, I93L Q18T 
VIC_HIV_12 VIC_HIV_12 None    T12TP, I13IV, N37C, R41RK, I62V, L63P, A71T, I72IT, V77I, I93L  
VIC_HIV_13 VIC_HIV_13 None    L10I, I13V, K20I, E35D, M36I, R41K, H69K, L89M, F99L  
VIC_HIV_14 VIC_HIV_14 None    N37S, I62IV  
VIC_HIV_15 VIC_HIV_15 None    I15V, G16E, L19I, M36I, N37A, H69K, I72V, L89M, I93L T80I 
VIC_HIV_16 VIC_HIV_16 None    M36I, I62V  
VIC_HIV_17 VIC_HIV_17 None    L10I, I13V, L33V, N37C, I62V, L63IT, I64V, I93L  
VIC_HIV_18 VIC_HIV_18 None   L10F E35D, N37D, L63P, V77I, I93L  
VIC_HIV_19 VIC_HIV_19 None    T12TS, I62V, L63P, V77I, I93L  
VIC_HIV_2 VIC_HIV_2 None    T12TS, I13V, K14R, Q61H, L63P, V77I, I93L  
VIC_HIV_20 VIC_HIV_20 None    T12P, E35D, M36I, L63P, A71V, V77I, I93L  
VIC_HIV_21 VIC_HIV_21 None    L10I, N37S, I64IV, I93L  
VIC_HIV_22 VIC_HIV_22 None    L10I, L63P, I72T, I93L  
VIC_HIV_23 VIC_HIV_23 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89LM, I93L  
VIC_HIV_24 VIC_HIV_24 None    E35D, M36I, R41K, I62IV, L63C, I64IL, H69Y, A71V, I72T, I93L  
VIC_HIV_25 VIC_HIV_25 None    N37C, R41RK, I62V, L63P, A71T, I72IM, V77I, I93L L90LV 
VIC_HIV_26 VIC_HIV_26 None    I13V, M36I, R41K, H69K, L89M  
VIC_HIV_27 VIC_HIV_27 None    T12N, K14R, K20R, E35D, M36I, R41K, L63S, A71V, I72T, Q92E, I93L  
VIC_HIV_28 VIC_HIV_28 None    I13V, K14R, G16E, K20I, E35D, M36I, P39S, R41K, L63S, I64M, H69K, K70R, L89M  
VIC_HIV_29 VIC_HIV_29 None    L10V, N37S, L63LP  
VIC_HIV_3 VIC_HIV_3 None    I13V, L19I, E35D, N37T, R41RK, I62V, L63P, V77I  
VIC_HIV_30 VIC_HIV_30 None    R41K, K43R, K45KR, I62V, L63P, A71AV, V77I, I93L  
VIC_HIV_31 VIC_HIV_31 None    P39S, I62V, L63P, I64L, V77I, I93L  
VIC_HIV_32 VIC_HIV_32 None    L10N, M36I, D60E, Q61E, I62V, L63P, A71V, I72T, I93L  
VIC_HIV_33 VIC_HIV_33 None    Q18QH, N37C, R41RK, I62V, L63P, A71T, I72IM, V77I, I93L  
VIC_HIV_34 VIC_HIV_34 None    T12TA, L19Q, R41K, I62V, L63H, A71V, I72M, I93L  
VIC_HIV_35 VIC_HIV_35 None    M36I, N37D, I64V, C67CW  
VIC_HIV_36 VIC_HIV_36 None    T12S, I15V, L19Q, M36I, R41K, D60E, Q61E, H69K, V82I, L89M, I93L  
VIC_HIV_37 VIC_HIV_37 None    T12P, K14R, R41K, R57K, L63P, A71AT, V77I, I93L  
VIC_HIV_38 VIC_HIV_38 None    T12N, L63E, I64V, E65D, H69Y  
VIC_HIV_39 VIC_HIV_39 None    K14KR, R41K, L63P, V77I, I93L  
VIC_HIV_4 VIC_HIV_4 None    R41RK, K43R, I62V, L63PS, I64IL, E65ED, A71AV, V77I, I93L  
VIC_HIV_40 VIC_HIV_40 None    T12P, I15V, G16E, E35D, M36I, N37NT, R41K, G68E, H69K, L89IM, I93L  
VIC_HIV_41 VIC_HIV_41 None    I13IV, K14M, L33V, N37AT, I64V  
VIC_HIV_42 VIC_HIV_42 None    E35D, N37S, R41K, L63Q, I64V, V82I  
VIC_HIV_43 VIC_HIV_43 None    L10I, I13V, E35D, M36I, R41K, R57K, C67G, H69K, L89M  
VIC_HIV_44 VIC_HIV_44 None    E35D, N37S, L63P, V77I, I93L  
VIC_HIV_45 VIC_HIV_45 None    L10I, T12P, I13V, L19LI, L63P, A71AT, F99L  
VIC_HIV_46 VIC_HIV_46 None    T12P, L19I, K20R, E35D, M36I, L63P, C67Y, I93L  
VIC_HIV_47 VIC_HIV_47 None    I13V, K14KR, Q18QE, E35D, L63P, I64V, V77I  
VIC_HIV_48 VIC_HIV_48 None    L10V, I13V, L33V, E35D, I64V  
VIC_HIV_49 VIC_HIV_49 None    I13V, L33V, L63HP, I64IV, I72V, V77I  
VIC_HIV_5 VIC_HIV_5 None    I13V, L19V, K20M, E35D, L63P, I64V, I93L  
VIC_HIV_50 VIC_HIV_50 None    I62V, L63P, I64L  
VIC_HIV_51 VIC_HIV_51 None    E35D, M36I, R41K, L63C, H69Y, A71V, I72T, I93L  
VIC_HIV_52 VIC_HIV_52 None    K14R, E35D, N37D, L63P, V77I, I93IL  
VIC_HIV_53 VIC_HIV_53 None    I13V, K20R, E35D, M36I, R41K, L63P, I64L, H69K, K70R, V77I, L89M, L97I  
VIC_HIV_54 VIC_HIV_54 None    L63P, C67S, V77I  
VIC_HIV_55 VIC_HIV_55 None    I13IV, L63P  
VIC_HIV_56 VIC_HIV_56 None    N37X, L63P, V77I  
VIC_HIV_57 VIC_HIV_57 None    T12S, I15V, L19LI, E35ED, M36MIL, N37S, P39PL, R41K, D60E, L63P, H69K, L89M, I93L  
VIC_HIV_58 VIC_HIV_58 None    I13V, E35D, M36V, R41K, K45R, H69K, K70KR, V82I, L89M  
VIC_HIV_59 VIC_HIV_59 None    K14R, R41K, I62V, L63P, V77I, I93L  
VIC_HIV_6 VIC_HIV_6 None    L10IT, E35D, L63P, I64V  
VIC_HIV_60 VIC_HIV_60 None   Q58E I13V, N37D, R57K, L63P, V77VI  
VIC_HIV_61 VIC_HIV_61 None    I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M  
VIC_HIV_62 VIC_HIV_62 None    E35ED, N37S, R41K, I62V, L63S, E65D  
VIC_HIV_63 VIC_HIV_63 None    L10LI, K20KR, E35D, N37D, R57K, I62IV, L63P, A71T, V77I, I93L  
VIC_HIV_64 VIC_HIV_64 None    I13V, E35D, M36I, R41K, H69K, K70KR, L89M  
VIC_HIV_65 VIC_HIV_65 None    T12A, R57K, L63P, I93L  
VIC_HIV_66 VIC_HIV_66 None    E35D, L63P, K70R  
VIC_HIV_67 VIC_HIV_67 None    T12P, L19I, N37S, L63P, I93L  
VIC_HIV_68 VIC_HIV_68 None    L10I, E35D, M36MI, L63V, I64V, I93L  
VIC_HIV_69 VIC_HIV_69 None    E35D, N37S, R41K, I64IM, A71V, I72T, I93L  
VIC_HIV_7 VIC_HIV_7 None    T12S, I15V, L19T, M36I, R41K, L63S, H69K, P79N, L89M, I93L  
VIC_HIV_70 VIC_HIV_70 None    I13V, G16E, E35D, M36I, R41K, L63LP, H69K, K70R, L89M  
VIC_HIV_71 VIC_HIV_71 None    K14R, R41K, I62IV, L63PS  
VIC_HIV_72 VIC_HIV_72 None    L33LI, L63P, C67S, V77I  
VIC_HIV_73 VIC_HIV_73 None    K14R, E35D, N37D, L63P, V77I  
VIC_HIV_74 VIC_HIV_74 None    K14R, E35D, N37D, R57K, L63P, V77I, I93L  
VIC_HIV_75 VIC_HIV_75 None    I13V, E35D, M36I, R41K, L63S, H69K, L89M, T91A, F99L  
VIC_HIV_76 VIC_HIV_76 None    K14R, N37D, I62V, L63P, A71T, I72LS, V77I, I93L  
VIC_HIV_77 VIC_HIV_77 None    I15IV, I93L  
VIC_HIV_78 VIC_HIV_78 None    I15V  
VIC_HIV_79 VIC_HIV_79 None    M36I, R41K, L63X, H69K, L89LM, I93L  
VIC_HIV_8 VIC_HIV_8 None    E35D, R41K, L63P, I64V  
VIC_HIV_80 VIC_HIV_80 None    T12A, I15V, L19I, E35D, M36I, R41K, K45R, L63P, H69K, I93L  
VIC_HIV_81 VIC_HIV_81 None    I13V, E35D, M36I, R41K, H69K, L89M  
VIC_HIV_82 VIC_HIV_82 None    L10V, I13V, G16E, K20R, E35D, M36I, R41K, K43R, L63C, H69K, L89M  
VIC_HIV_83 VIC_HIV_83 None    K14R, N37D, I62V, L63P, A71T, V77I, I93L  
VIC_HIV_84 VIC_HIV_84 None    I15L, E35D, R41K, I62V, L63P, A71AV  
VIC_HIV_85 VIC_HIV_85 None    E35ED, N37ST, L38LI, I62IV, L63P, V77I, I93L  
VIC_HIV_86 VIC_HIV_86 None    T12S, I15V, L19T, M36I, R41K, L63P, H69K, L89M, I93L  
VIC_HIV_87 VIC_HIV_87 None    K14KR, I15IV, E35D, M36I, N37ND, R41K, R57RK, H69K, L89M  
VIC_HIV_88 VIC_HIV_88 None    L19T, K20R, M36I, I62V, L63P, C67Y, V77I, I93L  
VIC_HIV_89 VIC_HIV_89 None    I13IV, R41K, K43R, D60E, I62V, L63P, V77I, I93L  
VIC_HIV_9 VIC_HIV_9 None    N37C, I62V, L63P, A71T, V77I, I93L  
VIC_HIV_90 VIC_HIV_90 None    E35D, R41K, L63P, I72IV, V77I, I93L  
VIC_HIV_91 VIC_HIV_91 None    L33V, N37T, L63P, L89M, I93L  
VIC_HIV_92 VIC_HIV_92 None   L33F I13V, E35D, M36T, R41K, H69K, L89M, I93IL, L97I, F99FL  
VIC_HIV_93 VIC_HIV_93 None    K14N, L19I, K20R, M36I, R41K, R57K, L63S, H69K, I93L  
VIC_HIV_94 VIC_HIV_94 None    L10LI, G17GE, N37E, I62V, L63T, A71T, V77I, I93L  
VIC_HIV_95 VIC_HIV_95 None    I13V, L19I, M36I, K43R, I62V, L63P, I72V  
VIC_HIV_96 VIC_HIV_96 None    E35D, M36I, R41K, L63C, H69Y, A71V, I72T, I93L  
VIC_HIV_97 VIC_HIV_97 None    K14R, E35D, N37D, R41K, D60E, I62V, L63P, A71T, I72E, V77I, I93L  
VIC_HIV_98 VIC_HIV_98 None    I13V, G16E, E34D, E35D, M36I, P39T, D60E, L63LP, H69K, I72IV, L89I, I93L  
VIC_HIV_99 VIC_HIV_99 None    N37S, I62V, L63P, I64IM, I72IV, V77I, I93L