Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kiros (2020)
Title Increased HIV-1 pretreatment drug resistance with consistent clade homogeneity among ART-naive HIV-1 infected individuals in Ethiopia.
Citation Retrovirology
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 51
NumPts 51
Subtype C, A

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
AK-127 AK-127 None    I15V, M36I, R41K, L63A, H69K, I93L  
AK-127B AK-127B None    G17D, L19T, K20R, M36I, R57K, L63S, H69K, L89M, I93L  
AK-128B AK-128B None    T12K, L19I, M36I, R41K, D60E, Q61E, L63P, C67Y, H69K, K70R, I72V, I93L  
AK-131 AK-131 None    L10I, I13V, E35D, M36I, N37D, R41K, L63V, H69K, L89M  
AK-133 AK-133 None    L10I, I15V, L19V, M36I, R41K, L63T, H69S, L89M, I93L  
AK-134 AK-134 None    T12S, I15V, L19Q, M36I, R41K, L63P, H69K, I93L  
AK-135 AK-135 None    I15V, K20R, E35D, M36I, N37E, R41K, H69K, T74S, L89M, I93L  
AK-135C AK-135C None    L10V, K14R, I15V, G16E, M36I, R41K, H69K, L89M, I93L  
AK-136 AK-136 None    I15V, L19T, K20R, M36I, R41K, R57K, L63V, H69K, I93L  
AK-138 AK-138 None    I15V, M36I, R41K, L63T, H69K, L89M, I93L  
AL-071B AL-071B None    I15V, G16E, K20KR, M36I, I62V, H69K, T74S, L89M, I93L  
AL-074 AL-074 None    T12S, L19I, M36I, R41K, Q61E, H69K, L89M, I93L  
AL-075 AL-075 None    M36I, R41K, Q61E, L63C, E65D, H69K, L89M  
AL-075B AL-075B None    T12S, I15V, L19I, E35D, M36I, P39Q, R41K, D60E, Q61E, L63P, H69K, L89M, I93L A71P 
AL-076 AL-076 None    T12S, I13V, K14R, I15V, L19I, K20R, M36I, N37D, R41K, E65D, H69K, L89M, I93L  
AL-078 AL-078 None   G73S G17D, K20R, M36I, R41K, L63T, H69K, L89M, Q92H, I93L  
AL-079 AL-079 None    I15V, M36I, R41K, H69K, I93L  
AL-080 AL-080 None    I15V, K20R, M36I, R41K, R57K, H69K, L89I  
AL-080B AL-080B None    I15V, M36I, R41K, I64V, H69K, I93L  
AL-082 AL-082 None    I15V, L19T, M36I, R41K, L63P, H69K, I93L  
AL-084 AL-084 None    I13V, M36I, R41K, L63P, H69K, T74S, L89M, I93L  
AL-085B AL-085B None    T12S, I15V, L19I, E35D, M36I, R41K, L63A, H69K, I93L  
AL-088 AL-088 None    G17D, E35D, M36I, N37S, R41K, L63T, H69K, L89M, I93L  
AL-088B AL-088B None    T12S, I15V, L19Q, M36I, R41K, L63P, H69K, T91N, I93L  
AL-090 AL-090 None    T12S, K14I, G16A, L19V, M36I, R41K, D60E, Q61E, I62V, H69K, T74A, L89M, I93L  
AL-090B AL-090B None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
AL-091 AL-091 None   K20T T12S, I15V, L19T, M36I, R41K, L63C, H69K, A71T, T74S, L89I, I93L  
AL-092 AL-092 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I72M, I93L  
AL-093 AL-093 None    T12S, I15V, G17D, L19I, K20R, M36I, R41K, H69K, L89M, I93L  
AL-094 AL-094 None   L89LV I15V, L19T, M36I, N37T, R41K, Q61N, L63A, H69K, T74S, I93L  
AL-097 AL-097 None    K14R, I15V, M36I, R41K, L63P, H69K, V77I, L89M, I93L  
AL-098 AL-098 None    K14R, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
AL-099 AL-099 None    I15V, L19I, M36I, R41K, L63P, H69K, I93L, C95CS G94GE 
NI-028BII NI-028BII None    T12S, I13V, I15V, L19T, K20R, M36I, R41K, K43R, L63A, H69K, L89M, I93L  
NI-031 NI-031 None    T12S, I15V, L19I, M36I, R41K, L63A, H69K, L89M, I93L  
NI-032 NI-032 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
NI-032C NI-032C None    T12A, I15V, L19V, E35D, M36I, R41K, I62V, L63S, H69K, A71T, I93L  
NI-033A NI-033A None    T12P, I15V, G16E, M36I, N37S, R41K, L63N, H69K, L89M, I93L  
NI-033C NI-033C None    I15V, E35D, M36I, R41K, L63S, H69K, T74S, L89M, I93L  
NI-034D NI-034D None    K14KR, I15V, G16E, M36I, R41RK, L63N, H69K, K70R, L89I, I93L  
NI-035A NI-035A None    I15V, L19I, M36I, R41K, L63ST, H69K, T74S, L89M, I93L  
NI-035D NI-035D None    V11I, T12S, I15V, L19I, K20R, M36I, L63T, H69K, I72T, L89I, I93L  
NI-036 NI-036 None    T12X, I13IV, K14KR, L19I, K20R, M36I, L63X, H69K, T74S, L89M, I93L T80TP 
NI-036A NI-036A None    I15V, G16E, K20R, M36I, R41K, R57K, L63I, H69K, L89M, I93L  
NI-038B NI-038B None    L19I, M36L, N37S, R41K, L63Q, H69K, L89M, I93L  
PA-139B PA-139B None    I15V, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
PA-142 PA-142 None    K20R, M36I, R41K, L63S, H69K, L89M, I93L  
PA-142D PA-142D None    I15V, M36I, R41K, L63V, H69K, V82I, L89M, I93L  
PA-144C PA-144C None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
PA-146D PA-146D None    K14N, L19V, K20R, L33V, M36I, R41K, L63S, H69K, I72T, L89M, I93L  
PA-149B PA-149B None    I15V, L19I, M36I, R41K, H69K, L89M, I93L