Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Khairunisa (2020)
Title 2018-2019 Update on the Molecular Epidemiology of HIV-1 in Indonesia.
Citation AIDS Res Hum Retroviruses
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 47
NumPts 47
Subtype CRF01_AE, B, A, CRF02_AG, B + CRF01_AE

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
BB_1-18 BB_1-18 PI    L19Q, K20R, E35D, M36I, R41K, H69K, V82I, L89M, I93L, F99S  
BB_2-18 BB_2-18 PI    I13V, G16E, K20R, E35D, M36I, R41K, H69K, V77I, L89M, I93L  
BB_6-18 BB_6-18 PI    L10I, I13V, G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M  
BB_7-18 BB_7-18 PI    I13V, L19M, K20I, E35N, M36I, R41K, H69K, K70R, L89M, L97I, F99S  
CEN_4-18 CEN_4-18 PI    I15V, E35D, M36I, R41K, H69K, T74S, L89M, I93M, L97F, N98K  
CEN_5-18 CEN_5-18 PI   L33F V11I, I13V, M36I, R41K, H69K, K70R, L89M, L97I  
IM_1-18 IM_1-18 PI    I15V, M36I, P39T, R41K, K43R, I62V, L63P, I72V, I93L  
KLT_14-19 KLT_14-19 PI    G16E, E35D, M36I, R41K, H69K, K70R, T74S, L89M, I93V  
KPG_13-19 KPG_13-19 PI    L10I, I13V, G16A, E35D, M36I, R41K, L63V, H69K, L89M  
MER_MIL_1-18 MER_MIL_1-18 PI    K20R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L  
MER_MIL_2-18 MER_MIL_2-18 PI    I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89M  
MER_MIL_3-18 MER_MIL_3-18 PI    I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M  
MER_MIL_4-18 MER_MIL_4-18 PI    I13V, G16E, K20R, E35D, M36I, P39T, R41K, H69K, L89M  
MER_UM_3-18 MER_UM_3-18 PI    I13V, E35D, M36I, R41K, Q61E, L63P, H69K, T74S, L89M, I93L, F99S  
MER_UM_4-18 MER_UM_4-18 PI    R8P, I13V, E35D, M36I, N37Y, R41K, R57K, D60E, H69K, K70E, G78R, L89M, Q92H, I93V A22P 
MER_UM_6-18 MER_UM_6-18 PI    T4I, K20R, E35D, M36I, N37D, R41K, R57K, H69K, I72R, V77I, L89M, T91I, I93L, L97I A71D, I85M 
MER_UM_7-18 MER_UM_7-18 PI    K20R, E35D, M36I, N37D, R41K, R57K, H69K, V77I, L89M, I93L, L97I  
SBY_10-18 SBY_10-18 PI    T12P, I13V, E35D, M36I, R41K, R57K, H69K, L89M  
SBY_12-19 SBY_12-19 PI    G16E, K20R, E35D, M36I, N37D, R41K, I62V, H69K, K70R, L89M, F99S  
SBY_14-19 SBY_14-19 PI    I13V, G16E, K20R, E35D, M36I, N37D, R41K, L63T, H69K, V77I, L89M, I93L T74I 
SBY_2-18 SBY_2-18 PI    G16E, K20R, E35D, M36I, R41K, I62V, H69K, I72V, L89M, F99S  
SBY_2-19 SBY_2-19 PI    L10I, I13V, E35D, M36I, R41K, H69K, L89M, L97I  
SBY_3-18 SBY_3-18 PI    I13V, K20R, E35D, M36I, R41K, H69K, V77I, L89M  
SBY_3-19 SBY_3-19 PI    I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M, F99S  
SBY_5-18 SBY_5-18 PI    L10M, I13V, M36I, R41K, C67S, H69K, L89I, I93L  
SBY_5-19 SBY_5-19 PI    G16E, E35D, M36I, R41K, I62V, H69K, I72V, L89M  
SBY_6-19 SBY_6-19 PI    L10I, I13V, G16E, K20R, E35D, M36I, R41K, L63F, C67G, H69K, L89M, L97I  
SBY_7-19 SBY_7-19 PI   L33F I13V, M36I, P39L, R41K, L63I, H69K, L89M, F99S  
SBY_9-19 SBY_9-19 PI    I13V, K20R, E35D, M36I, N37D, R41K, H69K, V77I, L89M, L97I, F99S  
SOL_1-18 SOL_1-18 PI    L10I, I15V, E35D, M36I, I62V, L63P, C67S, I93L  
SOL_13_18 SOL_13_18 PI    I13V, I15V, E35D, M36I, R41K, D60E, H69K, L89M  
SOL_2-18 SOL_2-18 PI    I15V, L19I, M36I, I62V, L63S  
SOL_4-18 SOL_4-18 PI    L10I, I15V, M36I, R41K, L63S  
SOL_6-18 SOL_6-18 PI    I15V, L19Q, M36I, I62V, L63P, V75I, I93L G94S 
SOL_8-18 SOL_8-18 PI    I15V, L19Q, M36I, I62V, L63P, K70N, I72T, Q92K A71R 
TAN_1-18 TAN_1-18 PI    L10V, I13V, K14N, G16E, K20R, E35D, M36I, R41K, D60E, L63S, H69K, K70R, T74A, L89M, T91S  
TAN_2-18 TAN_2-18 PI    I13V, I15L, K20I, M36I, N37D, R41K, K43R, L63P, H69R, A71V, L89M, I93L, L97F, N98K  
TAN_3-18 TAN_3-18 PI    T12A, G16E, L19Q, K20R, E35D, M36I, R57K, L63S, H69K, I72V, L89M, I93L, F99S  
TAN_4-18 TAN_4-18 PI    L10I, I13V, E35D, M36I, R41K, H69R, L89M  
TAN_5-18 TAN_5-18 PI    L10I, I13V, K14R, I15L, K20I, L33V, M36I, N37D, R41K, L63P, H69N, V82I, L89I, L97I V11G 
TAN_7-18 TAN_7-18 PI    L10V, T12R, I13V, I15L, K20I, E35N, M36I, N37D, R41K, L63P, I64L, H69K, L89M  
UDA_10-18 UDA_10-18 PI    L10V, I13V, G16E, E35N, M36I, P39S, R41K, L63T, H69K, L89M, T91V  
UDA_11-18 UDA_11-18 PI    I13V, K20R, E35D, M36I, R41K, C67E, H69K, V77I, N83H, L89M, L90F, Q92H  
UDA_2-18 UDA_2-18 PI    L10V, I13V, M36I, R41K, L63P, H69K, K70R, I72V, L89M, T91V  
UDA_4-18 UDA_4-18 PI    I13V, G16E, L19I, D25N, E35D, M36I, R41K, H69K, K70R, L89M  
UDA_7-18 UDA_7-18 PI    I13V, K20R, E35N, M36I, N37D, R41K, I62V, H69K, L89M, L97I  
UDA_9-18 UDA_9-18 PI    I15V, G16E, E35D, M36I, R41K, L63T, I64L, H69K, T74S, L89M, I93L