Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Zhao (2020)
Title HIV-1 molecular epidemiology and drug resistance-associated mutations among treatment-naive blood donors in China.
Citation Sci Rep
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 168
NumPts 168
Subtype CRF01_AE, B + C, CRF07_BC, B, A, CRF55_01B, C, B + CRF01_AE, CRF08_BC

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 168 Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
Beijing045 Beijing045 None None   E28K, K32E, V35T, E36A, T39E, S48T, V60I, D121Y, K122E  
Changchun001 Changchun001 None None   E6D, K11T, V35T, T39K, V60I, D123S, I135T, K173R, Q174K, D177E, T200I, Q207A, R211S, F214L  
Changchun018 Changchun018 None None   V60I, D123E, I135T, K173I, Q174K, D177E, Q207A, R211S, F214L  
Changchun024 Changchun024 None None   P4H, E6N, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, S162N, K173I, Q174K, D177E, T200R, Q207A, R211S, F214L, K238R  
Changchun055 Changchun055 None None   E6D, V8I, K11T, K32I, V35T, T39K, V111I, K122E, D123S, I135T, K173I, Q174K, D177E, Q207A, R211S, F214L  
Changchun057 Changchun057 None None   V60I, D123E, I135T, I202V, Q207R, R211K, F214L  
Changchun058 Changchun058 None None   E6D, V35T, T39R, K43E, K103R, K122E, D123S, I135T, K173I, Q174K, D177E, V179I, T200I, Q207A, R211S, F214L, K238R  
Changchun060 Changchun060 None None   P4Q, E6N, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, V179I, T200R, Q207A, R211S, F214L, K238R  
Changchun066 Changchun066 None None  V179D V35T, E36A, T39D, S48T, V60I, K102R, D121H, K122E, K126R, I135K  
Changchun071 Changchun071 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, K122E, I135V  
Changchun073 Changchun073 None None   E6D, V35T, T39K, K43E, V60I, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200A, Q207A, L210M, R211S, F214L, K238R  
Changchun074 Changchun074 None None  V179D P4H, E6N, K11T, V35T, T39R, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200S, Q207A, R211S, F214L, K238R  
Chongqing001 Chongqing001 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, F87L, D121Y, K122E, K173R, V189I, T200I  
Chongqing002 Chongqing002 None None   E28K, K32E, V35K, E36A, T39D, S48T, V60I, D121Y, K122E, I135T  
Chongqing003 Chongqing003 None None  V179E E6D, V35T, T39K, K43E, V60I, K122E, D123S, I135R, T200I, R211K, F214L  
Chongqing004 Chongqing004 None None   E6D, V35T, T39K, K43E, V60I, K122E, D123S, I135T, Q145H, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R K126N 
Chongqing005 Chongqing005 None None  V179E E28K, K32E, V35T, E36A, T39D, S48T, E53D, V60I, S162C, I178L, T200A, Q207E  
Chongqing006 Chongqing006 None None   E28K, K32E, V35T, E36A, T39E, S48T, V60I  
Chongqing007 Chongqing007 None None   K11R, E28K, K32E, V35T, E36A, T39D, S48T, D121Y, K122E, I142V V60T 
Chongqing008 Chongqing008 None None  V179D V35T, E36A, T39E, S48T, E53D, V60I, D121Y, K122E, I135K, T200A  
Chongqing010 Chongqing010 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121H, K122E, I135V, K166R  
Chongqing011 Chongqing011 None None   E6D, K11T, V35T, T39K, K103R, K122E, D123S, I135T, I142V, K173I, Q174K, D177E, V179T, T200A, Q207A, R211S, F214L, K238R  
Chongqing012 Chongqing012 None None   V8I, E28K, K32E, V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135M, A158S, S162A  
Chongqing013 Chongqing013 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, K122E, D123E, K166R, I202V, L210F  
Chongqing014 Chongqing014 None None   V35T, T39E, S48T, V60I, K122E, G196R, I202V, Q207E, R211K  
Chongqing015 Chongqing015 None None  V179D V35T, E36A, T39N, S48T, E53D, V60I, K122E, E169D, T200A, Q207E, R211K  
Chongqing016 Chongqing016 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I178M, Q207G, R211K  
Chongqing018 Chongqing018 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E  
Chongqing019 Chongqing019 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121H, K122E, Q207E  
Chongqing020 Chongqing020 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, S162Y  
Chongqing021 Chongqing021 None None   V35T, T39N, S48T, V60I, D121Y, K122E, I135R, R211K  
Chongqing022 Chongqing022 None None   E6D, V35K, T39D, K49R, V60I, K102Q, D121Y, K122E, I135T, K166R, Q174R, Q207E, R211K  
Chongqing023 Chongqing023 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E  
Chongqing024 Chongqing024 None None   V35T, T39N, V60I, D121H, K122E, I135R, I142V, R211K  
Chongqing025 Chongqing025 None None   V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135T, P176T, I202V, K223R  
Chongqing026 Chongqing026 None None   V35T, T39N, S48T, K49R, V60I, T69E, D121H, K122E, S162T, G196E  
Chongqing027 Chongqing027 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, V179I  
ChongqingCWB ChongqingCWB None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, Q207E  
ChongqingHJ ChongqingHJ None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, R211G  
ChongqingHYK ChongqingHYK None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S  
ChongqingLJY ChongqingLJY None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E  
ChongqingWJB ChongqingWJB None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, K122E, K166R, R211K  
Gansu001 Gansu001 None None   V35T, E36A, T39D, S48T, V60I, K101R, D121Y, K122E, I135R, S162C, I178L, T200A, R211K  
Harbin001 Harbin001 None None   E6D, K11T, K20R, V35T, T39K, K43E, K102Q, V118I, K122E, D123S, I135T, K173M, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R  
Harbin0036HA Harbin0036HA None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, K122E  
Harbin004 Harbin004 None None  V179E V35M, D121Y, K122E, K126R, D177E, G196E, T200A, E204K, Q207E, F214L  
Harbin005 Harbin005 None None   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173M, Q174K, D177E, T200R, Q207A, R211S, F214L, K238R  
Harbin007 Harbin007 None None   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L  
Harbin010 Harbin010 None None   V35T, E36A, T39E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L  
Harbin017 Harbin017 None None   E28K, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I142V, R211K K32D 
Harbin021 Harbin021 None None   E6D, K11A, K20R, V35T, T39K, S68G, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200R, I202V, Q207A, R211S, F214L  
Harbin022 Harbin022 None None  V179E E6D, K11T, K20R, V35T, T39M, D121H, K122E, D123S, I135R, R211K, F214L  
Harbin023 Harbin023 None None   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L  
Harbin031 Harbin031 None None   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200R, Q207A, R211S, F214L, K238R  
Harbin032 Harbin032 None None   V8I, V35K, T39D, S48T, E53D, V60I, K103R, I135M, S162C, T200A, Q207E, R211K  
Harbin033 Harbin033 None None   E6D, V35T, T39K, K43E, V60I, V118I, K122E, D123S, I135T, K173I, Q174K, D177G, T200A, Q207A, R211S, F214L, K238R  
Harbin034 Harbin034 None None   E6D, K11T, V35T, T39K, K43E, K102R, D123E, S162C, Q174E, D177E, V179I, T200A, E204K, Q207A, R211N, K238R  
Harbin035 Harbin035 None None   E6D, V35T, T39K, K43E, D121H, K122E, F171Y, K173A, Q174K, D177E, I178M, T200I, Q207A, R211S, F214L, K238R  
Harbin036 Harbin036 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, K122E, I135T, G196K, I202V  
Harbin045 Harbin045 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121H, K122E, T200A, Q207K  
Harbin049 Harbin049 None None   P4N, K11T, K20R, V35T, T39R, K43E, K103R, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R  
Harbin055 Harbin055 None None   E6D, V35K, T39E, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, Q207A, R211S, K238R  
Hebei981 Hebei981 None None   E6D, K11T, V35T, T39R, K43E, S68G, K122E, D123S, I135R, S162W, D177E, Q207A, R211S, K238R  
Henan001 Henan001 None None   E6D, V35T, T39K, K43E, V60I, S105A, K122E, D123S, K173R, Q174K, D177E, I178M, V179I, Q207E, R211S, K238R  
Henan002 Henan002 None None   I135V, S162C, T200A  
Henan003 Henan003 None None   K11R, I135V, S162C, T200A  
Henan004 Henan004 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121H, K122E, I135T, I142T, I195L, R211K  
Henan005 Henan005 None None   K32E, V35K, E36A, T39D, V60I, D121Y, K122E, I135K, I159V  
Henan006 Henan006 None None   E6D, K11T, V35T, T39K, K43E, K102R, V118I, K122E, D123S, K173I, Q174K, D177E, T200R, Q207A, R211S, F214L  
Henan007 Henan007 None None  V179D E6D, K11T, V35T, T39K, K43E, K102R, D121H, D123S, I135T, S162C, K173R, Q174K, D177E, I178M, E203D, Q207A, R211S, K238R  
Henan008 Henan008 None None   S68G, D123E, Y127F, I135V, S162C, E169D, Q174E, T200A, E204K, Q207E  
Henan009 Henan009 None None   K49R, I135V, S162C, K173T, T200A, Q207D, R211K  
Henan010 Henan010 None None   V35M, S48T, K103R, D123E, E169D, Q174R, G196E, T200E, Q207E, H208Y, R211K  
Henan011 Henan011 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123S, I135T, S162C, F171Y, K173R, Q174K, D177E, I178M, Q197L, T200A, E203D, Q207A, R211S, F214L, K238R  
Henan012 Henan012 None None   E28K, K32E, V35T, E36A, T39D, S48T, K49R, V60I, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, E203D, Q207A, R211S, K238R  
Henan014 Henan014 None None   E6D, K11T, V35T, T39G, K101Q, D121H, K122E, D123S, I135R, S162C, D177E, V179I, Q207A, R211S, K238R  
Henan0145HN Henan0145HN None None   P4Q, E6D, E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, D177E, T200I, Q207A, R211S, F214L  
Henan015 Henan015 None None   E28K, K32E, V35T, E36A, T39N, S48T, V60I, K102R, D121Y, K122E, S162C  
Henan016 Henan016 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135M, R211G  
Henan017 Henan017 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E  
Henan018 Henan018 None None   E28K, K32E, V35T, E36A, T39N, S48T, V60I, D121Y, K122E, I135T, T139A, Q197K  
Henan019 Henan019 None None  V179E E6D, V35T, T39K, K43E, K122E, D123N, I135R, I202V, R211K, F214L  
Henan020 Henan020 None None  V179D E28K, K32E, V35T, T39D, S48T, V60I, K102R, D121Y, K122E  
Jiangsu003 Jiangsu003 None None   E6D, V35T, T39E, K49R, K122E, D123S, I135T, T200I, R211K, F214L, K238R  
Jiangsu007 Jiangsu007 None None   V35T, T39K, K43E, K122E, D123S, I135T, S162C, K173R, Q174K, D177E, I178M, Q207A, R211S, K238R  
Jiangsu008 Jiangsu008 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123S, I135V, S162C, D177E, I178M, E203D, Q207A, R211S, K238R  
Jiangsu009 Jiangsu009 None None   I5V, K20R, K102R, V118I, K122E, I135R, I202V, F214L  
Jiangsu010 Jiangsu010 None None   E6D, K11S, K32E, V35I, T39K, K43A, S68G, K122E, D123S, I135R, S162C, K173R, Q174K, D177E, V179T, T200I, Q207A, R211S, K238R  
Liaoning001 Liaoning001 None None   K11A, V35T, T39R, K43E, T69A, V118I, K122E, D123S, I135T, K166R, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R  
Liaoning004 Liaoning004 None None   K122E, D123S, K173I, Q174K, V179I, T200V, Q207A, R211S  
Liaoning0052017 Liaoning0052017 None None   E6D, K32I, V35T, T39K, K43A, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, T200I, I202V, Q207T, R211S, F214L, K238R  
Liaoning010 Liaoning010 None None   E28K, K32E, V35T, E36A, T39E, S48T, E53D, V60I, D121Y, K122E, I135T, R211K  
Liaoning011 Liaoning011 None None   E28K, K32E, V35T, E36A, T39D, V60I, K122E, D123S  
Liaoning012 Liaoning012 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123N, I135K, K173T, Q174K, D177E, I178V, T200I, I202V, Q207A, R211S, F214L  
Liaoning013 Liaoning013 None None   E6D, K11T, V35T, T39K, K43E, K102R, K122E, D123S, I135T, I142V, K173M, Q174K, T200A, Q207A, R211S, F214L, K238R  
Liaoning014 Liaoning014 None None   E6D, K11T, V35T, T39K, K122E, D123N, S162C, K173R, Q174K, D177E, I178M, V179I, I202V, Q207A, R211S, K238R  
Liaoning017 Liaoning017 None None   P4N, E6D, K11T, V35T, T39K, K43E, K64R, V118I, K122E, D123N, I135T, K173I, Q174K, D177E, G196R, T200I, Q207A, R211S, F214L, K238R  
Linfen001 Linfen001 None None   E6D, V35T, T39K, K43E, K122E, D123S, I135T, K173R, Q174K, D177E, T200I, Q207A, R211S, K238R  
Linfen004 Linfen004 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, R211G  
Linfen005 Linfen005 None None   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200R, Q207A, L210M, R211S, F214L, K238R