Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Zhao (2020)
Title HIV-1 molecular epidemiology and drug resistance-associated mutations among treatment-naive blood donors in China.
Citation Sci Rep
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 170
NumPts 170
Subtype CRF01_AE, CRF07_BC, C, B + CRF01_AE, B, CRF55_01B, CRF08_BC, A, CRF65_cpx, CRF02_AG, CRF06_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 170 Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
Beijing045 Beijing045 None    K7R, V31I, K42Q, M50I, I72V, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Changchun001 Changchun001 None    E11D, K14R, R20K, A21T, V31I, T112V, T124A, T125A, G134N, I135V, K136Q, V201I, L234I, S283G  
Changchun018 Changchun018 None    K14R, A21T, V31I, L101I, T112V, S119P, T124A, T125A, G134N, I135V, K136R, V201I, I203M  
Changchun024 Changchun024 None    E11D, S24N, V31I, T112V, I113V, S119P, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G  
Changchun055 Changchun055 None    E11D, A21T, V31I, L101I, T112V, I113V, T124A, G134N, K136R, L234I, V281M, S283G  
Changchun057 Changchun057 None    S39C, L101I, V201I, D253E, V281M  
Changchun058 Changchun058 None    K14R, A21T, V31I, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
Changchun066 Changchun066 None    K14R, V31I, K42Q, I84M, L101I, T112V, I113V, T124A, T125A, K136R, V201I, T206S, L234I, I267V, R269K, D278A, S283G  
Changchun071 Changchun071 None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, K160R, V201I, L234S, R269K, D278A, S283G  
Changchun073 Changchun073 None    E11D, K14R, A21T, A23V, V31I, L45V, T112V, T124A, T125A, G134N, K136R, D167E, V201I, L234I, S283G  
Changchun074 Changchun074 None    E11D, S24N, V31I, T112V, I113V, S119P, T124A, T125A, G134N, I135V, K136R, V201I, I203M, L234I, S283G  
Chongqing001 Chongqing001 None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Chongqing002 Chongqing002 None    K14R, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V165I, V201I, L234S, R269K, D278A, S283G  
Chongqing003 Chongqing003 None    E11D, K14R, A21T, V32I, D41N, L101I, T112V, T124A, T125A, K127R, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
Chongqing004 Chongqing004 None    K14R, A21T, A23V, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, H171L, V201I, L234I, S283G  
Chongqing005 Chongqing005 None    V31I, K42Q, I84M, L101I, T112I, T124A, T125A, I135V, V165I, V201I, D278A, S283G, R284G S81N 
Chongqing006 Chongqing006 None    V31I, K42Q, I84M, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, I203M, L234S, R269K, D278A, S283G  
Chongqing007 Chongqing007 None    V31I, K42Q, L101I, T112V, S119P, T124A, T125A, I135L, K136Q, V201I, L234T, S255G, R269K, D278A, S283G  
Chongqing008 Chongqing008 None    K14R, K42Q, I84M, L101V, T112V, T124A, T125A, V201I, L234I, D278T, S283G  
Chongqing009 Chongqing009 None    K42Q, L101I, T112V, T124A, T125A, V201I, L234I, S283G  
Chongqing010 Chongqing010 None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Chongqing011 Chongqing011 None    D25E, V31I, L101I, T112V, T124A, T125S, G134N, I135V, K136Q, V201I, L234I, S283G  
Chongqing012 Chongqing012 None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, D167E, V201I, L234S, R269K, D278A, S283G  
Chongqing013 Chongqing013 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234I, R269K, D278A, S283G  
Chongqing014 Chongqing014 None    V31I, K42Q, I84M, L101I, T112V, T124A, T125A, K136H, V201I, L234S, R269K, D278A, S283G  
Chongqing015 Chongqing015 None    R20K, L101I, T112V, T124A, T125A, K136Q, K211R, T218I, L234I, R269K, D278A, S283G  
Chongqing016 Chongqing016 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Chongqing018 Chongqing018 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Chongqing019 Chongqing019 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, K160R, V201I, L234S, R269K, D278A, S283G  
Chongqing020 Chongqing020 None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, K160R, V201I, L234S, R269K, D278A, S283G  
Chongqing021 Chongqing021 None    L28I, K42Q, L45I, I84M, L101I, T112V, T124A, T125A, I135V, K136Q, V201I, N254K, R269K, D278A, S283G, R284G L234R 
Chongqing022 Chongqing022 None    D6E, E10A, K14R, S17N, A23V, K42Q, L45V, I84M, L101I, T112V, T125A, K136Q, K160R, G163E, V201I, R269K, D278A, S283G F26V, L234R 
Chongqing023 Chongqing023 None    E11D, R20K, V31I, K42Q, I84M, L101I, T112V, T124A, T125A, K136Q, V201I, L234S, R269K, D278A, S283G  
Chongqing024 Chongqing024 None    K42Q, I84M, L101I, T112V, T124S, T125A, K136Q, V201I, D229E, L234S, R269K, D278A, S283G  
Chongqing025 Chongqing025 None    K14R, V31I, D41N, K42Q, I84M, L101I, T112I, T124N, T125A, K136H, V201I, L234I, R269K, D278A  
Chongqing026 Chongqing026 None    V31I, D41N, K42Q, I72V, I84M, L101I, T112V, T124A, T125A, G134D, K136R, V180I, V201I, L234I, R269K, D278A, S283G  
Chongqing027 Chongqing027 None    V31I, K42Q, A49P, I84M, L101I, T112V, T124A, T125A, I135L, K136Q, K188R, V201I, L234S, D256E, R269K, D278A, S283G  
ChongqingCWB ChongqingCWB None    K14R, V31I, K42Q, I84M, L101I, T112V, T124A, T125A, K136Q, I141T, V201I, L234I, R269K, D278A, S283G  
ChongqingHJ ChongqingHJ None    K14R, V31I, K42Q, I84M, L101I, T112V, T124A, T125A, I135L, V201I, L234I, R269K, D278A, S283G  
ChongqingHYK ChongqingHYK None    K14R, A21T, A23V, D25E, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K211R, L234I, S283G, R284G  
ChongqingLJY ChongqingLJY None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, I208L, L234S, R269K, D278A, S283G  
ChongqingWJB ChongqingWJB None    V31I, K42Q, I84M, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, T218S, L234S, R269K, D278A, S283G  
Gansu001 Gansu001 None    K14R, K42Q, I84M, L101I, T112V, T124A, T125A, K136H, V201I, L234S, D278A, S283G  
Harbin001 Harbin001 None    E11D, A21T, A23V, A91E, T112V, S119R, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
Harbin0036HA Harbin0036HA None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Harbin004 Harbin004 None    E11D, S24N, I72V, L101I, T112I, T124N, K156N, D167E, V201I  
Harbin005 Harbin005 None    E11D, K14R, R20K, A21T, I60L, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
Harbin007 Harbin007 None    K14R, A21T, A23V, V31I, T112V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G  
Harbin010 Harbin010 None    K14R, V31I, K42Q, I84M, L101I, T112V, T124A, T125A, K136R, V201I, L234I, S283G  
Harbin017 Harbin017 None    S17N, V31I, K42Q, I84M, L101I, G106A, T112V, T124S, T125A, I135L, K136Q, V201I, I203M, I208L, L234S, D278A, S283G  
Harbin021 Harbin021 None    E11D, A21T, S24G, D25E, S39C, G106A, K111Q, T112V, S119P, T125A, G134N, I135V, K136R, K160R, D167E, V201I, L234I, S283G  
Harbin023 Harbin023 None    K14R, S39C, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, L234I, S283G  
Harbin031 Harbin031 None    E11D, S24N, V31I, T112V, I113V, S119P, T124A, T125A, G134N, I135V, K136Q, V201I, L234I, S283G  
Harbin032 Harbin032 None    K14R, V31I, V32I, L101I, L104I, T112V, T124A, T125A, K136Q, K211R, L234I, R269K, D278A, S283G L102LI 
Harbin033 Harbin033 None    E11D, K14R, A21T, A23V, L45V, T112V, T124A, T125A, G134N, K136R, D167E, K188R, V201I, L234I, S283G  
Harbin034 Harbin034 None    V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, I203M, I208L, L234I, S283G  
Harbin035 Harbin035 None    K14R, V31I, V32I, T112V, T124A, T125A, K127R, G134N, I135V, K136R, D167E, V201I, K211R, L234I, S283G  
Harbin036 Harbin036 None    K42Q, I84M, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Harbin045 Harbin045 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Harbin049 Harbin049 None    K14R, A21T, A23V, V31I, V32I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K211R, L234I, S283G  
Hebei981 Hebei981 None    E11D, K14R, V32I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, T218S, L234I, D279G, S283G  
Henan001 Henan001 None    K14R, R20K, V31I, L63I, I72V, L74I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, T218S, L234I, D253E, D279G, S283G  
Henan002 Henan002 None    L28I, S39C, G70N, V88I, A91T, L101I, S119R, T124N, T125S, K156N, R187K, K211R, S230N  
Henan003 Henan003 None    S17N, L68V, V88I, A91T, L101I, K111R, S119R, T125P, S153A, K156N, K211R  
Henan004 Henan004 None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, K160R, V201I, Q216H, L234S, V260I, R269K, D278A, S283G  
Henan005 Henan005 None    R20K, V31I, L63I, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, L234I, V281M, S283G, D286N  
Henan006 Henan006 None    K14R, R20K, V31I, L101I, T112V, T124A, T125A, I135L, K136Q, G163E, V201I, L234I, R269K, D278A, S283G  
Henan007 Henan007 None    E11D, K14R, R20K, A23V, V31I, D41N, K42Q, I84M, L101I, T112V, T124S, K136Q, V201I, T206S, S230N, L234N, R269K, D278A, S283G  
Henan008 Henan008 None   E157Q V88I, A91T, L101I, S119R, T125P, K156N, I203M  
Henan009 Henan009 None    S17N, L68V, V88I, A91T, L101I, S119R, T124N, T125S, G163E, K211R, D270E, D279G A265G 
Henan010 Henan010 None    S17N, R20K, V31I, F100Y, L101I, T112V, T124A, T125A, G163D, V201I, L234I  
Henan011 Henan011 None    E11D, K14R, V31I, V32I, S39C, L101I, T112I, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, Q216H, L234I, N254K, S283G  
Henan012 Henan012 None    K14R, V31I, I72V, G106A, T112V, I113V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, L234I, S283G, R284G, D286N  
Henan013 Henan013 None    V31I, V54I, L63I, L101I, T124A, D167E, K188R, V201I, I203M, L234I, S283G  
Henan014 Henan014 None    K14R, V31I, K71Q, T112V, S119R, T124A, T125A, G134N, I135V, K136R, D167E, H171Y, G193E, V201I, K211R, L234I, D279G, S283G  
Henan0145HN Henan0145HN None    V31I, K42Q, I84M, L101I, T112V, T124A, T125A, G134N, I135V, V201I, L234I, S283G  
Henan015 Henan015 None    V31I, K42Q, I84M, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Henan016 Henan016 None    K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, I141V, V201I, I208M, L234S, R269K, D278A, S283G  
Henan017 Henan017 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, K173R, V201I, L234S, R269K, D278A, S283G  
Henan018 Henan018 None    K14R, D41N, K42Q, I72V, I84M, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Henan019 Henan019 None    E11D, K14R, V31I, V32I, L101I, T112V, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
Henan020 Henan020 None    K14R, V31I, K42Q, I72V, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Jiangsu003 Jiangsu003 None    K14R, M22I, M50I, I72V, L101I, T112V, T124N, T125A, G134N, I135V, K136R, D167E, G193E, V201I, L234I, S283G  
Jiangsu007 Jiangsu007 None    K14R, L28I, K42Q, I84M, L101I, T112V, T124A, T125A, G193E, V201I, L234I, S283G, D286N  
Jiangsu008 Jiangsu008 None    K14R, V31I, D41N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, I203M, L234I, S283G  
Jiangsu009 Jiangsu009 None    K42Q, L45V, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
Jiangsu010 Jiangsu010 None    K14R, L28I, V31I, I72V, I84V, T112A, T124A, T125A, G134N, I135V, K136R, M154I, D167E, V201I, I208M, L234I, S283G  
Liaoning001 Liaoning001 None    E11D, A21T, V31I, V32I, A80T, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
Liaoning004 Liaoning004 None    K14R, A21T, S24N, S39N, L45V, I72V, L101I, T112I, T124A, T125A, G134S, I135V, K136Q, V165I, D167E, V201I, L234I, S283G  
Liaoning005 Liaoning005 None    S17T, D41N, I72V, T206S  
Liaoning0052017 Liaoning0052017 None    E11D, V32I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
Liaoning010 Liaoning010 None    L101I, T112I, T124N, T125A, I135L, K136Q, G163E, L234S, R269K, D278A, S283G  
Liaoning011 Liaoning011 None    E11D, K14R, S24N, L28I, V37I, S39C, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, V201I, L234I, S283G  
Liaoning012 Liaoning012 None    K14R, V32I, I72V, L101I, T112V, I113V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I  
Liaoning013 Liaoning013 None    E11D, K14R, A21T, V31I, T112V, T124A, T125A, G134N, K136R, V165I, D167E, G193E, V201I, L234I, N254K, S283G  
Liaoning014 Liaoning014 None    E11D, I72V, T112V, I113V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, I203M, L234I, S283G  
Liaoning017 Liaoning017 None    K14R, A21T, V31I, L45V, T112V, T124A, T125A, G134N, K136R, D167E, G193E, V201I, L234I, S283G  
Linfen001 Linfen001 None    L28I, V31I, L45V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
Linfen004 Linfen004 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, I220V, L234S, R269K, D278A, S283G  
Linfen005 Linfen005 None    E11D, K14R, A21T, A23V, L45V, I60L, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G