Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Chen (2020)
Title Laos is Affected by HIV CRF01_AE and the Newly Identified CRF97_01B.
Citation Virol Sin
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 59
NumPts 59
Subtype CRF01_AE, A

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
BL12F4561 BL12F4561 None    E11D, K14R, A21T, D25E, V31I, V32I, I72V, Q95H, T112V, S119P, T124A, T125A, G134N, I135V, K136Q, V165I, D167E, V201I, L234I, S283G  
BL33M4535 BL33M4535 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136T, D167E, V201I, L234I, S283G  
BL33M5227 BL33M5227 None    K14R, V31I, I72V, L101I, T112V, T124A, T125A, G134N, K136R, K160R, D167E, G193D, S195C, V201I, I203M, K215N, L234I, S283G  
BL38F5131 BL38F5131 None    K14R, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
BL38F5143 BL38F5143 None    K14R, A21T, V31I, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
BL38M5270 BL38M5270 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, V126M, G134N, I135V, K136R, D167E, V201I, T206S, L234I, S283G  
BL40F5333 BL40F5333 None    K14R, V31I, I72V, Q95N, G106A, T112V, T124A, T125A, G134N, K136R, D167E, G193D, S195C, V201I, L234I, D279G, S283G  
BL41F5229 BL41F5229 None    K14R, A21T, V31I, L45Q, I72V, Q95P, T112V, T124A, T125A, V126L, G134N, I135V, K136R, D167E, V201I, L234I, S283G, R284G, D286N  
BL50F5250 BL50F5250 None    K14R, A21T, V31I, S39N, I72V, T112V, T124G, T125A, G134N, I135V, K136R, K160Q, Q164K, R187K, V201I, L234I, D253E, D279G, S283G  
KH18F5154 KH18F5154 None    K14R, V31I, S39N, I72V, T112V, T124G, T125A, G134N, I135V, K136R, K160Q, R187K, V201I, L234I, D253E, D279G, S283G  
KH19F5101 KH19F5101 None    K7R, K14R, A21T, V31I, S39C, M50I, L101V, T112V, T124A, T125A, G134N, E138D, D167E, V201I, L234I, S283G  
VI12F4094 VI12F4094 None    K14R, A21T, V31I, S39N, V54I, I72V, T112V, T124A, T125A, V126M, G134N, I135V, K136Q, D167E, V201I, L234I, D278N, S283G  
VI15M4478 VI15M4478 None    E11D, K14R, A21T, A23V, V31I, S39N, I72V, L101I, T112V, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
VI20F3001 VI20F3001 None    K14R, A21T, I72V, T112V, T124A, T125A, K127R, G134N, I135V, K136R, V165I, D167E, A169S, R187K, I200L, V201I, I204L, K211R, E212K, L234I, S283G E198K 
VI20F3007 VI20F3007 None    K14R, V31I, I72V, T112V, T124A, T125A, G134N, I135V, V150I, D167E, R187K, V201I, T206S, L234I, S283G  
VI20F5274 VI20F5274 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, E157G, L158F, K160Q, I162L, Q164K, H183HP, V201I, I203L, L213F, K215N, T218S, L234I, D253E, S283G H171P 
VI20M4446 VI20M4446 None    E11D, K14R, A21T, A23V, V31I, S39N, I72V, L101I, T112V, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
VI21M5276 VI21M5276 None    E11D, A21T, V31I, I72V, I84V, T112V, T125A, G134N, I135V, K136Q, M154I, D167E, V201I, L234I, S283G H67R 
VI22F3810 VI22F3810 None    A21T, V31I, S39T, I84V, T112V, T125A, V126L, G134N, I135V, K136R, M154I, L158F, V165I, D167E, V201I, K211R, L234I, S283G T115TP 
VI22F3899 VI22F3899 None    K14R, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, T206S, L234I, S283G  
VI25F3297 VI25F3297 None    K14R, A21T, V32I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
VI25F4357 VI25F4357 None    K14R, A21T, V31I, G106A, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
VI25F4363 VI25F4363 None    K14R, A21T, V31I, S39N, I72V, L101I, T112V, T125V, G134N, I135V, K136Q, D167E, V201I, K211R, L234I, S283G  
VI26F2885 VI26F2885 None    K14R, V31I, S39N, I72V, T112V, T124A, T125A, V126M, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
VI26F2939 VI26F2939 None    K14R, A21T, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, I203L, L234I, S283G  
VI27F3026 VI27F3026 None    K14R, V31I, V32I, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, V201I, L234I, S283G  
VI28F3940 VI28F3940 None    E11D, K14R, A21T, V31I, I72V, K111R, T112V, T125A, V126M, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
VI29F2980 VI29F2980 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, L234I, S283G  
VI29M2888 VI29M2888 None    K14R, A21T, V31I, S39N, I72V, T112V, T124N, T125A, G134N, I135V, K136R, K160Q, Q164K, D167E, V201I, L234I, D253E, D256E, S283G  
VI29M3024 VI29M3024 None    K14R, A21T, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
VI29M9897 VI29M9897 None    K14R, A21T, V31I, S39N, I72V, T112I, T124A, T125A, G134N, I135V, K136Q, V165I, V201I, L234I, S283G  
VI30F2999 VI30F2999 None    K14R, A21T, S39N, A49S, I72V, L74I, T112V, T124A, T125A, G134N, I135V, K136Q, K173R, V201I, L234I, D279DG, S283G  
VI33F3831 VI33F3831 None    K14R, A21T, S39N, I72V, T112V, I113V, T124A, T125A, G134N, I135V, K136R, V165I, V201I, L234I, S283G  
VI33M2961 VI33M2961 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, D167E, V201I, L234I, S283G  
VI34M3902 VI34M3902 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, K160Q, Q164K, V201I, L234I, D253E, S283G  
VI35F2871 VI35F2871 None    V31I, I72V, L101I, T112V, T124A, T125V, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
VI36F3920 VI36F3920 None    K14R, V32I, I72V, T112V, T124A, T125A, G134N, I135V, D167E, V201I, L234I, S283G  
VI36M3284 VI36M3284 None    K14R, A21T, V31I, S39N, M50I, I72V, T112V, T124A, T125A, V126L, G134N, I135V, K136R, G163E, D167E, V201I, L234I, S283G  
VI36M3933 VI36M3933 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, L234I, S283G, R284K, Q285R  
VI37F3781 VI37F3781 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, T206S, L234I, S283G  
VI38F3375 VI38F3375 None    K14R, A21T, V31I, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K215N, L234I, S283G  
VI38M3097 VI38M3097 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, V201I, L234I, N254K, S283G  
VI38M3815 VI38M3815 None    K14R, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K160N, D167E, V201I, T206S, L234I, S283G  
VI39F3163 VI39F3163 None    K14R, A21T, V31I, S39N, I72V, P90Q, L101I, T112V, T124N, T125A, G134N, I135V, K136R, D167E, V201I, I203M, I208L, L234I, S283G  
VI41M3868 VI41M3868 None    K14R, A21T, V31I, S39N, I72V, L101I, T112V, T124A, T125V, G134N, I135V, D167E, V201I, K211R, L234I, S283G  
VI42M2998 VI42M2998 None    K14R, A21T, S24G, D25E, E35Q, S39N, I72V, L101I, T112V, T124N, T125A, G134N, I135V, K136Q, V165I, D167E, V201I, L234I, S283G  
VI43F3290 VI43F3290 None    K14R, A21T, A23V, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, V201I, T206S, L234I, S283G  
VI44M3784 VI44M3784 None    E11D, K14R, A21T, A23V, I72V, T112V, T124A, T125A, G134N, I135V, D167E, V201I, L234I, S283G P109L 
VI45M3233 VI45M3233 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
VI47M3234 VI47M3234 None    V31I, I72V, T112V, T124N, T125A, V126M, G134N, I135V, K136R, D167E, V201I, K215N, L234I  
VI48M3407 VI48M3407 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G N117S 
VI50F3912 VI50F3912 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, K160Q, Q164K, V201I, L234I, S283G  
VI50M3793 VI50M3793 None    E11D, K14R, A21T, V31I, S39T, I72V, I84V, T112V, T125A, V126L, G134N, I135V, K136R, M154I, V165I, D167E, V201I, K211R, L234I, S283G  
VI52F3913 VI52F3913 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, K160R, D167E, I200M, V201I, K211R, L234I, S283G  
VI53M3289 VI53M3289 None    E11D, K14R, A21T, V32I, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, I203M, L234I, S283G  
VI60M3235 VI60M3235 None    K14R, A21T, V31I, S39N, I72V, T112V, T124N, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
VI80M3893 VI80M3893 None    K14R, A21T, V31I, S39N, I72V, T112V, T124N, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
XA50F5221 XA50F5221 None    V31I, I72V, T112I, T124A, T125A, G134N, K136R, V165I, D167E, V201I, L234I, S283G  
XI38F4856 XI38F4856 None    E11D, K14R, A21T, V31I, I72V, T112I, T124N, T125A, G134N, I135V, K136Q, V165I, V201I, L234I, S283G