Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Nduva (2020)
Title HIV-1 Transmission Patterns Within and Between Risk Groups in Coastal Kenya.
Citation Sci Rep
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 163
NumPts 163
Subtype A, C, D, B, G, CRF10_CD

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 163 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
A1.1031 A1.1031 None    E35D, M36I, R41K, R57K, L63V, H69K, L89M  
A1.1057 A1.1057 None    E35D, M36I, R41K, H69K, L89M  
A1.1226 A1.1226 None    E35D, M36L, N37D, R41K, R57K, D60E, Q61E, L63V, E65D, H69K, L89M  
A1.1320 A1.1320 None    E35D, M36I, R41K, K45R, R57K, H69K, L89M  
A1.1323 A1.1323 None    E35D, M36I, N37E, R41K, H69K, K70R, L89M  
A1.1381 A1.1381 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.1481 A1.1481 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.1536 A1.1536 None    E35D, M36I, N37D, R41K, H69K, L89M  
A1.1572 A1.1572 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.1587 A1.1587 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.1591 A1.1591 None    E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M  
A1.1598 A1.1598 None    E35D, M36I, N37E, R41K, R57K, D60E, H69K, L89M  
A1.1630 A1.1630 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1.1691 A1.1691 None    E35D, M36I, R41K, R57K, I62V, L63T, I64L, H69K, T74S, L89M  
A1.1741 A1.1741 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1.1749 A1.1749 None    E35D, M36I, N37E, R41K, R57K, L63S, H69K, L89M  
A1.1771 A1.1771 None    E35D, M36I, R41K, K45R, H69K, L89M  
A1.1774 A1.1774 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1.1800 A1.1800 None    M36I, R41K, I62V, C67W, H69K, L89M, I93V  
A1.1808 A1.1808 None    M36I, N37K, R41N, D60E, L63N, H69K, L89M, I93L  
A1.1832 A1.1832 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1.1836 A1.1836 None    E35N, M36I, N37D, R41K, H69K, K70R, L89M  
A1.1837 A1.1837 None    E35D, M36I, R41K, H69K, L89M  
A1.1846 A1.1846 None    E35D, M36I, N37D, R57K, I64M, H69K, L89M  
A1.1901 A1.1901 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1.1916 A1.1916 None    E35D, M36I, R41K, H69K, L89M  
A1.1925 A1.1925 None    E35D, M36I, N37D, R41K, H69K, L89M  
A1.2027 A1.2027 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.2045 A1.2045 None    E35D, M36I, N37D, R41K, R57K, L63V, E65D, H69K, L89M  
A1.2066 A1.2066 None    E35D, M36I, R41K, R57K, L63T, I64L, H69K, L89M  
A1.2074 A1.2074 None    E35D, M36I, R41K, R57K, L63P, H69K, L89M  
A1.2096 A1.2096 None    E35D, M36I, R41K, R57K, L63V, H69K, L89M  
A1.2518 A1.2518 None    E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M  
A1.2738 A1.2738 None    E35N, M36I, N37D, R41K, L63I, H69K, L89M  
A1.27981 A1.27981 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.2821 A1.2821 None    M36I, R41K, I64V  
A1.2896 A1.2896 None    E35D, M36I, N37E, R41K, K45R, R57K, D60E, L63P, C67Y, H69K, V77I, L89M  
A1.2980 A1.2980 None    E35D, M36I, R41K, R57K, L63P, H69K, I72V, L89M  
A1.3013 A1.3013 None    E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M  
A1.4017 A1.4017 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.4134 A1.4134 None    E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M  
A1.4135 A1.4135 None    E35D, M36I, R41K, Q61K, H69K, L89M  
A1.4253 A1.4253 None    E35D, M36I, N37S, R41K, R57K, D60E, L63P, H69K, L89M  
A1.4298 A1.4298 None    E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
A1.4337 A1.4337 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1.4346 A1.4346 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.4381 A1.4381 None    M36I, R41K, H69Q, L89M A28T, D30G, E35Y, P39R 
A1.4386 A1.4386 None    E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
A1.4410 A1.4410 None    V32A, E35D, M36I, R41K, K45R, R57RK, H69K, L89M  
A1.4457 A1.4457 None    M36I, N37E, R57K, L63P, C67Y, H69K, L89M  
A1.4469 A1.4469 None    E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M  
A1.536 A1.536 None    E35D, M36I, R41K, R57K, L63P, H69K, L89M  
A1.573 A1.573 None    E35D, M36I, R41K, L63P, H69K, L89M  
A1.574 A1.574 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.706 A1.706 None    E35D, M36I, R41K, R57K, L63H, H69K, L89M  
A1.761 A1.761 None    E35D, M36I, R41K, R57K, L63T, H69Q, L89M  
A1.806 A1.806 None    E35D, M36I, R41K, H69K, L89M  
A1.842 A1.842 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1.8657 A1.8657 None    E35D, M36I, R41K, R57K, I62V, H69K, L89M  
A1.870 A1.870 None    E35D, M36I, P39S, R41K, R57K, L63I, I64M, H69K, L89M  
A1.8737 A1.8737 None    E35D, M36I, R41K, R57K, D60E, H69K, L89M  
A1.925 A1.925 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1.970 A1.970 None    E35D, M36I, R41K, R57K, L63T, H69Q, L89M  
A1A2_16A2D.1027 A1A2_16A2D.1027 None    E35N, M36I, N37D, R41K, K43R, R57K, H69K, L89M  
A1C.2891 A1C.2891 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A1D.1736 A1D.1736 None    E35D, M36I, N37D, P39S, R41K, K45R, R57K, H69K, L89M  
A1D.1789 A1D.1789 None    E35D, M36I, R41K, R57K, L63R, H69K, L89M  
A1D.2760 A1D.2760 None    E35D, M36I, N37E, R57K, C67Y, H69K, K70R, V82I, L89M  
A1D.2787 A1D.2787 None    E35D, M36I, N37E, R57K, C67Y, H69K, K70R, V82I, L89M  
A1D.957 A1D.957 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
A2_16A2D.1755 A2_16A2D.1755 None    E35D, M36I, N37D, R41K, H69K, K70R, L89M, T91V  
A2_16A2D.4304 A2_16A2D.4304 None    E35D, M36I, R41K, L63V, G68E, H69K, K70R, L89M, T91V, I93L  
AID.1845 AID.1845 None    E35D, M36I, N37D, R41K, R57K, D60E, L63P, H69K, L89M  
C.1446 C.1446 None    M36I, R41K, H69K, L89M  
C.1642 C.1642 None    M36I, N37K, R41N, L63P, H69K, L89M, I93L  
C.1750 C.1750 None    M36I, N37K, R41N, H69K, L89M, I93L  
C.1815 C.1815 None    M36I, R41K, L63T, H69K, L89M, I93L  
C.1929 C.1929 None    M36I, R41K, L63V, H69K, T74S, L89M, I93L  
C.4433 C.4433 None    M36I, R41K, H69K, I72V, I93L  
C.4699 C.4699 None    M36I, N37K, R41N, I62V, L63P, H69K, V82I, I93L  
C.501 C.501 None    M36I, N37K, R41N, L63P, H69K, L89M, I93L  
C.908 C.908 None    M36I, R41K, L63V, H69K, L89M, I93L  
C.936 C.936 None    N37K, R41N, R57K, L63T, G68E, H69R, L89M, I93L  
CA1.1218 CA1.1218 None    R41K, L63P, H69K, I93L  
CA1D.1918 CA1D.1918 None    M36I, R41K, L63T, I64V, E65D, I72V  
D.1206 D.1206 None    R41K, D60E, L63P, I64V, I72E, V77I  
D.1366 D.1366 None    E35D, M36I, R41K, Q61H, H69Y  
D.1488 D.1488 None    R41K, R57K, L63D, I64V, E65N, I72T, V77I  
D.1528 D.1528 None    R41K, R57K, L63P, V77I  
D.1547 D.1547 None    M36I, R41K, L63Q, I64M, H69K  
D.1557 D.1557 None    M36I, L63P, K70T, I72V, I93L  
D.1612 D.1612 None    R41K, L63P, E65D  
D.1714 D.1714 None    R41K, I64V, H69Y  
D.1726 D.1726 None    E35D, M36L, N37S, R41K, I64V, H69Y  
D.1943 D.1943 None    R41K, L63P, I64V, E65D  
D.4225 D.4225 None    E35D, M36I, R41K, L63I, I64V, E65D  
D.4484 D.4484 None    L63A, I64V  
D.4574 D.4574 None    M36I, R41K, L63P, H69Q, I93L  
D.562 D.562 None    R41K, D60E, L63S, I64V, V77I  
D.777 D.777 None    R41K, L63P, I72M