Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Hebberecht (2019)
Title Single genome sequencing of near full-length HIV-1 RNA using a limiting dilution approach.
Citation J Virol Methods
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 77
NumPts 77
Subtype B, CRF02_AG, F, A, C, CRF01_AE, D, G, H


Clinical PR Isolates

AA AA Unknown    L19V, D60E, Q61E, L63P, V77I, I93L  
AB AB Unknown    L10I, E35D, R41K, L63P, A71T, I93L  
AC AC Unknown    I15V, M36I, R41K, I93L  
AD AD Unknown    I15V, N37S, R41K, I62V, L63S, V77I, I93L  
AE AE Unknown    L10V, T12K, I13V, K20R, M36I, R41K, H69K, L89M  
AF AF Unknown    K14R, L19I, E35ED, I62V, L63A, I66V, H69Q, A71T, V77I, I93L  
AG AG Unknown    K14R, I15V, G16E, E35D, M36I, N37E, R41K, G68E, H69R, L89M, I93L  
AH AH Unknown    L10I, K14R, I15V, Q18L, L19I, R41RK, Y59YF, L63LP, I72V, Q92QK, F99FL  
AI AI Unknown    E35N, N37D, R41K, R57K, L63S, A71V, I93L  
AJ AJ Unknown    L10I, T12K, L19V, E35D, R41K, L63P, A71T, I93L  
AK AK Unknown  D30N  L33V, E35D, N37S, R57K, D60E, L63E, I64V  
AL AL Unknown   L10F K14R, I15V, L19F, E35D, M36I, R41K, R57K, I62V, L63T, E65D, K70R, T74S, L89M  
AM AM Unknown    T12X, K14R, I15V, L19F, E35D, M36I, R41K, R57K, L63T, E65D, I72T, T74S, L89M  
AN AN Unknown    L10M, T12S, I15V, L19I, M36L, N37S, R41K, L63P, H69K, K70KR, I72IMT, I93L  
AO AO Unknown    T12I, I15V, R41K, I93L  
AP AP Unknown    I13V, L33V, M36I, R41K, L89M  
AQ AQ Unknown    I13V, L33V, M36I, R41K, L89M  
AR AR Unknown    K14R, I15V, E35ED, R57K, L63P, I93L  
AS AS Unknown   L10F T12P, K14R, I15V, L19I, K20R, E35D, M36I, N37E, R41K, R57K, L63I, E65D, L89M  
AT AT Unknown    N37S, L63A  
AU AU Unknown    K14R, I15V, R41K, K43R, R57K, L63P, I93L V11VG 
AV AV Unknown   L10F I13V, K14R, G16E, Q18R, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M  
AW AW Unknown    Q7E, E35D, L63P, V77I, I93L  
AX AX Unknown    I13V, N37C, L63Q, V77I  
AY AY Unknown    T12S, I13V, Q61E, L63P  
AZ AZ Unknown    T12P, I13V, G16E, M36I, I62V, L63R, V82I  
BA BA Unknown    L10V, I15V, V77I, I93L  
BB BB Unknown    L19V, D60E, Q61E, I62V, L63P, V77I, I93L  
BC BC Unknown   L10F, L89MV I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, K70R  
BD BD Unknown    N37S, R41K, I62V, L63P, I93L  
BE BE Unknown    T12S, I13V, Q61E, L63P  
BF BF Unknown    L63P, V77I  
BG BG Unknown    R41K, I62V, L63P, V77VI, I93L  
BH BH Unknown   L10F I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
BI BI Unknown    T12P, K14R, N37CS, I62V, L63A, V77I, L89M, I93L  
BJ BJ Unknown   L10F I13V, K14R, G16E, Q18R, K20I, E35D, M36I, P39A, R41K, I64M, H69K, K70R, L89M  
BK BK Unknown   L10F I13V, K14R, G16E, Q18R, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M  
BL BL Unknown    I15V, L19I, K20M, M36I, N37C, L63Q, I64V, I93L  
BM BM Unknown    K14E, G16E, L19I, R57K, L63T, E65D, I72T, V77I, Q92K  
BN BN Unknown    I15L, L19V, D60E, Q61E, I62V, L63P, A71T, I93L  
BO BO Unknown    T12S, I15V, L19T, E35ED, M36I, R41IK, L63S, H69K, V82I, L89M, I93L  
BP BP Unknown    L10I, I13V, G16E, L63S, V77I, I93L  
BQ BQ Unknown    L10I, I13V, L19V, L33V, L63C, E65D, H69Y, I72V, I93L  
BR BR Unknown    L19I, L63P, V77I, I93L  
BS BS Unknown    L10I, I15V, G16GE, E35D, N37E, D60E, I62T, L63T, I64V, A71T, I93L  
BT BT Unknown    I13V, E35D, M36I, R57K, L63P, H69K, V77I, L89M  
BU BU Unknown    I13V, E35D, M36I, R57K, L63P, H69K, V77I, L89M  
BV BV Unknown    I13IM, K14KR, E35D, R41K, I62V, L63P, V77L, I93L  
BW BW Unknown    L10I, I15V, E35D, N37E, D60E, I62T, L63T, I64V, A71T, I93L  
BX BX Unknown   Q58E T12PS, I15IV, L19I, R57K, L63P, I72T  
BY BY Unknown    G16E, I62V, L63EQ, I64V, E65D, I72V  
BZ BZ Unknown    E35D, R57K, L63P, F99L  
CA CA Unknown    L10LV, V11VL, K20R, M36I, R41K, H69K, V82VI, L89M, I93L  
CB CB Unknown    I13V, D60E, L63P, V77I, I93L  
CC CC Unknown    G16E, N37S, R41K, I62V, L63S, I64V, I72V, V77I, I93L  
CD CD Unknown    L10I, I13V, L19V, L63C, H69Y, I72V, I93L Q7QP 
CE CE Unknown    N37S, R41K, L63P, I72T  
CF CF Unknown    E35D, M36I, I62V, L63P, I64L, H69Q  
CG CG Unknown    L10I, T12A, L19V, N37D, D60E, L63P, C67E, V77I, I93L  
CH CH Unknown    L10R, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, K70R, I72T, L89M, I93L V11E 
CI CI Unknown   L10F L19I, R41K, K55R, L63P, I64L, Q92H  
CJ CJ Unknown    L10I, L19V, N37D, D60E, L63P, C67E, V77I, I93L  
CK CK Unknown    T4TS, Q7X, R8RP, T12S, K14R, G17E, K20I, M36I, N37D, R41K, I64M, H69K, K70R, I72V, L89M  
CL CL Unknown    I15V, K20M, M36L, N37S, L63Q, I64V, E65D  
CM CM Unknown   L10F G16E, K20R, M36I, P39S, L63P, H69K, L89M, I93L  
CN CN Unknown    L10V, K14R, E35D, M36I, N37E, R41K, R57K, I62V, L63P, I72V, V77I, P79D, I93L  
CO CO Unknown    E35Q, N37D, I62V, L63P, I64V, A71T, V77I, I93L  
CP CP Unknown    K14R, E35D, N37E, L63P, I72T  
CQ CQ Unknown   Q58E T12P, I13V, G16E, E34EA, E35ED, M36I, G51GE, I62V, L63R, V82I  
CR CR Unknown    K14R, L63P, V77I  
CS CS Unknown    E35D, M36I, I62V, L63P, I64L, H69Q  
CT CT Unknown    T12A, I13V, K20M, M36I, R41K, L63P, I64V  
CU CU Unknown    I15IV, E35D, M36IL, N37DEG, R41RK, K45R, R57K, D60E, L63P, I64V, H69Q  
CV CV Unknown    I13V, K14R, K20I, E35D, M36I, R41K, C67S, H69K, K70R, V82I, L89M  
CW CW Unknown    L10V, I13V, G16E, L33I, E35D, M36I, R41K, K43KR, H69K, K70KR, L89M  
CX CX Unknown    I13V, G16E, K20R, M36I, N37H, P39S, R41K, D60E, I62V, L63S, H69K, I72V, L89I  
CY CY Unknown    K14R, E35D, N37D, R57K, L63P, I93L