Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Ayitewala (2020)
Title Comparison of HIV drug resistance profiles across HIV-1 subtypes A and D for patients receiving a tenofovir-based and zidovudine-based first line regimens in Uganda.
Citation AIDS Res Ther
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 66
NumPts 66
Subtype A, D, B

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
DR-0011-13 DR-0011-13 None    E35D, M36I, R41K, H69K, K70R, L89M  
DR-0022-11 DR-0022-11 None    L5F, I13V, E35D, M36I, R41K, R57K, I64V, E65D  
DR-0023-12 DR-0023-12 None    I15V, E35D, R41K  
DR-0024-13 DR-0024-13 None    E35D, M36I, N37D, R41K, R57K, H69K, L89M  
DR-0030-12 DR-0030-12 None    M36I, N37D, R41K, D60E, I62V, I64V  
DR-0032-12 DR-0032-12 None    T12P, I13V, M36I, P39T, D60E, L63PS, I64V, H69Y A22A_KGS 
DR-0038-10 DR-0038-10 None    L10X, G16R, M36I, N37D, P39S, R41K, D60E, I62V, I64V, I72V I15D, Q18T, L19A 
DR-0050-13 DR-0050-13 None    K20R, M36I, R41K, I64V  
DR-0061-13 DR-0061-13 None  V32VI K20T I13V, K14KR, M36I, R41K, I47X, L63P, I64V, V82VI  
DR-0064-13 DR-0064-13 None    L19I, R41K, L63P, I72E  
DR-0079-13 DR-0079-13 None    I13V, L19I, E35D, M36I, R41K, R57K, H69K, L89M  
DR-0096-11 DR-0096-11 None    I13V, M36I, N37D, R41K, R57K, D60E, L63P, H69Y, I72V  
DR-0099-11 DR-0099-11 None    L10V, I13V, G16R, L19I, K20R, E21G, T31P, E34V, E35D, M36I, L38M, R41K, K43X, G49E, R57G, L63P, I64V, E65G Q18D, G27R, K45G, M46A, I50F, K55Q, I62N 
DR-0102-13 DR-0102-13 None    E35D, M36I, R41K, D60E, I62V, L63P, I64V, V77I, I93L  
DR-0105-11 DR-0105-11 None    L5F, I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
DR-0106-13 DR-0106-13 None    M36I, R57K, L63P, I64V  
DR-0110-11 DR-0110-11 None    T12S, I13V, R41K, R57K, D60E, L63P, I64V, H69Y, V77I  
DR-0113-13 DR-0113-13 None    K20R, E34K, E35D, M36I, R41K, G51E, R57K, E65K, H69K, L89M  
DR-0117-11 DR-0117-11 None    P9T, I13X, E35D, M36I, R41K, R57K, H69K, L89M  
DR-0122-11 DR-0122-11 None    L5F, E35D, M36I, R41K, I62V, L63P  
DR-0143-12 DR-0143-12 None    I13V, I15IV, R41K, L63FS, I64V  
DR-0149-11 DR-0149-11 None    I13V, R41K, L63P, I64V, E65D  
DR-0151-12 DR-0151-12 None    L5F, L10V, I13V, K14R, G16E, K20R, E21K, E35D, M36I, N37D, R41K, R57K, Q61QH, L63S, H69K, K70R, L89M Q58QL, D60DY 
DR-0157-12 DR-0157-12 None   N88ND L10V, T12TP, I13V, G16E, E35D, M36I, N37D, R41K, H69K, L89M  
DR-0163-11 DR-0163-11 None    I13V, I15IV, E35D, N37Q, R41K, D60E, L63P, I72IV  
dr-0165-11 dr-0165-11 None   G73GC G16A, E21K, M36I, L38LV, G40GR, R41K, K55KR, R57K, H69K, G78GR, L89M, Q92QH E34E*, E35DY, G52GC, L90L* 
DR-0185-12 DR-0185-12 None    L10I, I13V, E35D, M36I, R41K, H69Q, L89M  
DR-023-16 DR-023-16 None    L10I, I13V, G17X, E21X, N37K, R41X, K45R, G49X, R57K, L63P, H69Q, L89M M36H 
DR-0231-12 DR-0231-12 None    L10N, V11I, T12V, K14M, I15X, K20R, M36I, R41K, I64V  
DR-0248-12 DR-0248-12 None    R41K, D60E, L63Q, I64V, V77I  
DR-037-06 DR-037-06 None    I13V, L33V, N37Q, P39S, R41K, L63Q, I64V  
DR-047-07 DR-047-07 None    E35D, M36I, R41K, R57K, L63P, H69K, L89M  
DR-121-11 DR-121-11 None  I47V  L5F, I13V, E35D, M36I, R41E, K45I, R57K, Q61H, H69K, L89M W42R, P44S, M46K, G49V, G52E, F53G 
DR-124-16 DR-124-16 None    R41K, L63P, C67S, A71T, V77I  
DR-128-16 DR-128-16 None    E35D, M36I, N37I, R41K, R57K, H69K, K70R, L89M  
DR-141-11 DR-141-11 None    E35D, M36I, R41K, R57K, H69K, L89M  
DR-141-13 DR-141-13 None    E35D, M36I, R41K, R57K, D60E, H69K, L89M  
DR-141-14 DR-141-14 None    I13V, M36I, R41K, M46X, L63S, I64V, I72V  
DR-148-11 DR-148-11 None    E35D, M36I, R41K, K45R, R57K, L63T, H69K, L89M  
DR-157-11 DR-157-11 None    G16R, Q18K, E35D, M36I, R41K, R57K, Q61DH, H69K, L89M  
DR-166-13 DR-166-13 None    T12Q, I13S, K14R, G16A, G17R, K20R, E35D, M36I, R41K, R57K, H69Q, V82I, L89M  
DR-195-13 DR-195-13 None    M36I, N37D, R41K, L63P  
DR-204-11 DR-204-11 None    L10M, I13V, K14N, G16E, E35D, M36I, R41K, K45R, R57K, L63T, H69K, L89M  
DR-207-13 DR-207-13 None    M36I, R41K, R57K, L63P, H69K, L89M  
DR-215-13 DR-215-13 None    E35D, M36I, R41K, R57K, H69K, L89M  
DR-217-11 DR-217-11 None   M46V Q7E, E35D, M36I, R41K, R57K, H69K, L89M  
DR-219-13 DR-219-13 None  D30N  E35D, M36I, R41K, R57K, L63H, H69K, K70R, L89M  
DR-227-12 DR-227-12 None    E35D, M36I, R41K, R57K, H69K, K70KR, L89M  
DR-240-14 DR-240-14 None    E35D, M36I, R57K, L63A, E65D, H69K, L89M  
DR-241-13 DR-241-13 None    E34D, E35D, M36I, R41K, R57K, H69K, L89M  
DR-243-13 DR-243-13 None    E21G, E35D, M36I, N37T, R41K, K45R, I64V  
DR-246-13 DR-246-13 None    I13V, R41K, Q61E, I64V, E65ED, H69Y  
DR-276-13 DR-276-13 None    I13V, I15V, E35D, M36I, R41K, R57K, L63LI, H69K, L89M  
DR-30-14 DR-30-14 None    I13V, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89M  
DR-300-13 DR-300-13 None    I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63Q, H69K, L89M  
DR-358-16 DR-358-16 None    I13V, E35D, M36I, R41K, M46X, F53X, H69K, L89M  
DR-57-14 DR-57-14 None  M46L  K20R, L24X, L33X, R41K, K45R, D60E, L63P, I64V, V77I  
DR-590-17 DR-590-17 None    E35D, M36I, R41K, I62V, L63V, H69K  
DR-661-17 DR-661-17 None    G17D, Q18K, K20R, L23X, E35D, M36I, N37D, R41K, L63P, I93L I50M 
DR-921-17 DR-921-17 None    W6L, I13V, K14R, K20R, L24X, E35D, M36I, R41K, M46X, R57K, L63A, H69K, V82I, L89M  
DR002-17 DR002-17 None    T12TS, I13V, T31P, L33*, E34D, M36I, R41K, K45R, R57RK, H69K, K70R, L89M V32S, E35L 
DR1071-17 DR1071-17 None   M46V L10V, I13V, K14R, I15V, L24X, R41K, I64V, K70R, I93L  
DR232-16 DR232-16 None    I13V, K20R, M36I, R41K, I62V, L63Q, I64V  
DR247-14 DR247-14 None    T12TA, I13V, I15V, E21EG, M36I, R41K, I62V, L63P, H69K, I72IM, L89M  
DR518-16 DR518-16 None    I13V, K20R, M36I, R41K, I62V, L63Q, I64V, E65D E34E* 
DR547-17 DR547-17 None    I13V, K20KM, M36I, R41K, D60E, Q61D, I64V, I72M  

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