Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Capoferri (2020)
Title Recombination Analysis of Near Full-Length HIV-1 Sequences and the Identification of a Potential New Circulating Recombinant Form from Rakai, Uganda.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 274
NumPts 274
Subtype D, A, C, C + D, CRF10_CD, B, CRF09_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 274 Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
A051598 A051598 None None   E6K, V35T, K49R, D121H, K122E, D123E, K166T, K173T, Q174K, D177E, T200A, Q207A, R211K, V245I, E248D, D250E, K281R, E291D, V292I, I293V, P294T, K311R, G335D, I341V, M357K, G359S, A360T, K366R, T369A, A371V, I375V, A376T, T377M, T386A, A400T, E404D, E432D, V435I, D471E, Q480H, L491S, Q524M, K527G, E529D, A554N, V559I  
A094422 A094422 None None   V21I, K32E, V35I, K49R, V60I, D121Y, K122E, D123E, I135R, D177E, T200I, Q207E, R211K, V245K, L246I, D250E, S251N, A272P, K277R, K281R, L282C, T286A, A288T, I293V, G335D, P345Q, F346Y, R356K, M357L, A360I, T377R, S379C, K390R, A400I, H483N, L491S, L517V, A534S, A554K, K558R, V559I  
A095192 A095192 None None   V10A, V35T, T39A, V60I, K102Q, K122E, I135T, K166R, K173A, Q174K, D177E, I178L, V179I, T200A, Q207A, R211S, V245T, S251X, A272S, K277R, T286A, E291D, V292I, I293V, P294T, E312T, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377L, I380X, V381X, I382V, K385X, T386X, P387X, F389L, K390R, A400T, T403M, E404D, E432D, V435A, N447S, D471E, K476R, Q480H, H483Y, L491S, E492G, K512R, S519N, Q524K, K527G, E529D, A534S, A554S G384V, L391F 
A115327 A115327 None None   E28K, K32E, V35M, E36Q, K49R, V60I, K64R, D121Y, K122E, I135T, T139S, I159V, D177E, T200I, Q207E, R211K, V245K, D250E, A272P, L282C, T286A, I293V, P294V, E297K, A304E, I329V, G335D, P345Q, F346Y, R356K, M357S, V365I, K374R, T377Q, S379C, K390R, A400T, V435A, E449G, S468P, H483N, L491S, I505V, K512R, S519N, K527R, E529D, A554N, V559I  
A115393 A115393 None None   E6K, V35T, V60I, K122E, D177E, I178M, E194D, T200I, Q207E, R211K, V245K, D250E, A272Q, L282C, L283I, T286A, I293V, G335D, P345Q, F346H, R356K, A360T, T377Q, S379C, K390R, A400T, V467I, T470P, H483K, A534S, A554N  
B077943 B077943 None None   V35K, T39E, E44D, E53D, V60I, S68G, K122E, D123S, I135T, S162H, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, I244V, V245I, A272G, T286A, E291D, V292I, I293V, P294T, E297M, A299X, E300X, L301X, L303M, E312D, D324E, G335D, M357R, R358K, G359A, I375V, T377Q, S379C, E399D, A400I, T403M, E404D, E432D, V435I, Q464K, T470A, D471E, Q480H, L491S, L517I, S519N, K527Q, K530R, A534S, A554S G273E, E302Q 
B091884 B091884 None None   V35T, K49R, E53D, V60I, D121Y, K122E, D177E, I178M, T200I, Q207E, R211K, K238R, V245Q, A272P, K277R, L282C, T286A, I293V, G335D, E344D, P345Q, F346Y, R356K, A360T, T377Q, S379C, K390R, A400T, L469I, T470A, H483N, I505V, L517I, A554S, V559I  
B115336 B115336 None None   K11T, K20R, V21I, V35T, T39R, E40D, K49R, V60I, K173S, D177E, I178V, V179I, T200A, I202V, Q207A, R211N, V245Q, E248D, T286A, E291D, V292I, I293V, P294V, I326M, G335D, M357K, G359S, T362S, K366R, T369A, A371V, I375V, A376V, T377M, A400T, T403M, E404D, E432D, V435A, A437V, R463K, D471E, T477A, Q480H, H483L, L491S, E514D, L517V, S519N, Q524K, K527G, E529D, A534S, A554S, V559I  
C049644 C049644 None None   P4T, V35T, V60I, D121Y, K122E, D123E, D177E, Q207G, R211K, V245K, P247A, D250E, A272S, L282C, L283I, T286A, I293V, G335D, P345Q, F346H, R356K, M357T, I375V, T377Q, S379C, K390R, A400T, L452I, S468T, H483N, S489A, L491S, S519N, A554S  
C078575 C078575 None None   E6K, K11H, V35T, E40D, K49R, V60I, K122E, D123S, K166T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q, E248D, D250E, T286A, E291D, V292I, I293V, P294T, E312D, A327V, G335D, F346Y, R356G, M357K, R358K, G359S, T369A, A371V, K374R, I375V, A376V, T377R, K390R, A400T, T403M, E432D, V435A, D460N, D471E, Q480H, H483Y, L491S, L517I, S519N, K527R, A534S, A554S  
C090220 C090220 None None   V35K, K49R, I50V, V60I, D121Y, K122E, D177E, I178M, T200I, Q207E, R211K, V245K, D250E, A272S, K277R, L282C, L283I, T286A, A288G, V292I, I293V, V317I, S322A, I329V, G335D, P345Q, F346Y, R356K, M357L, T377Q, S379C, K390R, A400T, E404D, A446S, L469I, T470A, D471E, H483N, L491S, S519N, A534S, A554N  
C094814 C094814 None None   V35T, K49R, V60I, D177E, I178M, I195L, T200I, Q207A, R211K, V245Q, D250E, K277R, L282C, L283I, T286A, V292I, I293V, E297A, I329V, G335D, P345Q, F346Y, R356K, M357L, T377Q, S379C, K390R, A400T, L469I, T470P, H483N, L491A, A534S, A554S, V559I  
C115329 C115329 None None   V60I, V111X, G112X, D113X, A114X, D121X, K122E, I142V, E194D, T200L, Q207E, R211K, V245K, D250E, A272T, L282C, R284K, T286A, I293V, I329V, G335D, P345Q, F346Y, R356K, M357R, A360T, K366R, T377Q, S379C, K390R, A400T, E432D, T450N, K451R, K454R, V467F, S468P, D471E, Q480H, H483L, L491S, L503I, K512S, S519N, Q524K, K527E, E529D, A534S, V548I, A554N L120Y 
D026571 D026571 None None   P4T, V21I, K32E, V35I, K49R, V60I, D121Y, K122E, I135R, D177E, T200I, I202V, Q207E, R211K, V245K, D250E, A272P, K281R, L282C, T286A, A288T, I293V, G335D, P345Q, F346Y, R356K, M357S, A360I, T377Q, S379C, K390R, A400T, H483N, L491S, L517V, Q520E, A534S, A554K, K558R, V559I  
D072128 D072128 None None   V35T, K49R, V60I, K64R, K82R, D121Y, K122E, D123G, T165I, D177E, I178M, T200I, Q207E, R211K, V245K, D250E, I257L, A272P, K277R, L282C, I293V, T338S, P345Q, F346Y, K347R, R356K, A360I, T377Q, S379C, T386A, K390R, A400T, R461K, I482V, H483N, L484I, A502V, S519N, A554N, V559I K104H 
D083914 D083914 None None   V35T, E36D, T39M, E44D, V60I, K104R, D121H, K122E, I135T, I142V, D177E, T200E, I202V, Q207G, R211K, I244V, V245T, A272P, K281R, L282C, L283I, T286V, I293V, E297K, G335D, P345Q, F346Y, R356K, M357T, V365I, T377H, S379C, K390R, A400T, K454R, A455X, G456X, Y457X, K465N, V466L, H483N, L491S, E514D, S519N, K527R, A534S, A554N, V559I D460Y, R461P, G462A, R463L, Q464P 
D094302 D094302 None None   V35T, K49R, V60I, D121Y, K122E, D177E, I178M, T200R, E204D, Q207E, R211K, V245K, D250E, A272P, K275R, K277R, Q278N, L282C, P321Q, Q334E, E344D, P345Q, F346Y, R356K, M357K, A360T, T377Q, S379C, K390R, A400T, L452A, R461K, H483N, S519N, A534S, A554N  
D094742 D094742 None None   K11T, K20R, V35T, T39K, K122E, D123N, K173S, D177E, V179I, I202V, Q207N, R211K, F214L, V245Q, E248D, A272S, T286A, E291D, I293V, P294Q, E312N, I326V, G335D, M357K, G359S, A371V, I375V, A376V, T377L, S379C, A400T, T403M, E404D, N418S, E432D, V435M, A446S, L452A, V466I, D471E, T477A, Q480H, H483Y, L491P, Q507H, A508S, K512S, E514D, S519N, Q524K, K527G, E529D, V531I, A534S, A554S  
D095501 D095501 None None   E6D, K20R, V35T, T39A, E40D, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, Q207K, R211S, F214L, V245Q, D250E, T286A, E291D, I293V, P294T, E312D, G335D, M357K, G359S, A371V, I375V, A376V, T377M, K390R, A400T, T403M, E404D, E432D, V435A, A446S, R461K, S468T, D471G, K476Q, T477A, L491S, K512R, E514D, S519N, Q524K, K527G, E529D, A534S, A554S  
D115388 D115388 None None   P4T, E6D, V35T, T39L, S48T, V60I, I135V, T200I, Q207E, R211K, V245K, K249Q, D250E, I257L, A272P, K277R, L282C, I293V, P321S, D324E, G335D, P345Q, F346Y, R356K, M357R, A360T, T377Q, S379C, K390R, A400T, K454R, V467I, S468T, H483N, L491V, A502V, K512Q, L517I, S519N, K527N, A534S, A554N  
D115419 D115419 None None   V35T, T39A, E40D, V60I, W88C, K122E, D123S, I135T, T139A, S162C, S163T, D177E, T200V, Q207E, R211K, F214L, V245K, D250E, A272S, K277R, L282C, L283I, I293V, Q334H, P345Q, F346Y, R356K, M357L, R358K, A360T, Q367E, E370G, Q373H, T377Q, S379C, K390R, A400T, E404D, V435I, L469M, T470A, H483N, L491S, Q520K, K527Q, A534S, A554N, V559I  
E065113 E065113 None None   E6K, V35T, E40D, V60I, K122E, I135T, I142V, S162A, K173L, Q174K, D177E, V179I, T200E, I202V, Q207A, R211S, F214L, V245Q, E248D, A272P, L283I, I293V, P294A, G335D, E344D, M357R, G359S, T369A, A371V, I375V, A376T, T377M, A400T, T403M, E404D, F416Y, E432D, V435A, V467A, D471E, Q480H, H483L, L491S, Q507H, K512R, L517I, S519N, Q524K, K527Q, E529D, A534S, A554S  
E096303 E096303 None None   V35T, T39A, K43R, S48T, V60I, D121H, K122E, D123S, I142V, T165I, K173S, Q174K, D177E, Q207A, R211K, V245T, T286A, V292I, I293V, P294T, P345Q, F346Y, R356K, M357T, G359S, T377Q, S379C, K390R, A400I, E404D, E432D, V435P, H483N, L491S, K512R, I521L, Q524K, K527G, E529D, A534S, A554L  
E115339 E115339 None None   K20R, V21I, V35T, T39R, K43E, V60I, K122P, D123E, Q174R, D177E, T200E, Q207E, R211K, V245Q, E248N, A272P, K281R, T286A, I293V, P294T, E312D, G335D, M357K, G359S, A371V, I375V, A376V, T377L, A400T, T403M, E404D, E432D, V435M, K451R, D471E, Q480H, H483Y, L491S, E514D, S519N, Q524K, K527G, E529D, A534S, A554N, K558R, V559I  
E115397 E115397 None None  V106I K32R, V35T, K49R, V60I, K104R, V118I, D121Y, K122E, R125K, S162C, Q174L, D177E, Q207E, R211K, F214L, V245E, D250E, A272P, K277R, L282C, L283I, I293V, G335D, F346Y, R356K, M357R, G359S, T377Q, S379C, K390R, A400T, V435M, A446S, K451R, S468H, L469I, H483N, L491S, S519N, K527N, A534S, A554N, V559I  
E115410 E115410 None None   V60I, D121Y, K122E, D123E, D177E, T200I, Q207G, R211K, V245K, E248D, D250E, T253N, A272P, L282C, L283I, R284K, T286A, I293V, P294T, E297K, L310I, Q334H, G335D, P345Q, F346Y, R356K, M357S, A360T, T369A, T377Q, K390R, A400I, E413D, V435A, A437V, H483N, E516D, S519N, A534S, A554K  
F071159 F071159 None None   V35K, K49R, V60I, D177E, T200I, Q207E, R211K, V245E, D250E, L282C, R284K, T286A, K311R, G335A, F346Y, R356K, A360T, T377Q, S379C, K390R, A400T, E404D, V435A, R461K, K476R, H483S, S519N, A534S, A554N, V559I Q464Y 
F096778 F096778 None None   V35T, E40D, K122E, D123S, D177E, I178M, Q207A, R211S, V245Q, A272P, T286A, K311R, Q334P, G335D, R356K, M357T, T377I, S379G, T386V, E399D, A400T, T403M, E404D, E432D, V435I, D471E, Q480H, L491S, A508G, K512R, L517I, S519N, Q524K, K527G, E529D, A534S, A554S  
F096964 F096964 None None   K11Q, V35T, V60I, D121Y, K122E, D123G, K173E, Q207E, R211K, V245K, P247A, D250E, A272P, V276T, K277R, L282C, L283I, I293V, E297A, I329V, G335D, P345Q, F346Y, R356K, A376S, T377Q, S379C, K390R, A400T, V435M, H483N, A534S, A554N, V559I  
F107751R15 F107751R15 None None   E28Q, V35T, K49R, V60I, K122E, D177E, I178M, Q207E, R211K, V245IT, D250G, L260I, A272S, K277R, Q278H, K281R, L282C, T286A, V292I, I293V, G335D, P345Q, F346Y, R356K, M357T, A360T, E370G, T377Q, S379C, K390R, A400T, N418S, L452Q, V467I, L469I, D471E, Q480H, H483N, L491S, A502V, S519N, Q524K, K527G, E529D, A534S, A554N  
F115330 F115330 None None   K20R, V35T, T39G, K49R, I159V, K173N, Q174K, D177E, I178M, V179I, T200A, I202V, Q207E, R211K, I244V, V245E, D250E, A272P, T286A, E291D, E297K, G335D, P345Q, F346H, R356K, M357V, A360T, T377Q, K390R, A400T, V435I, R461K, H483N, I506L, Q509H, L517T, A554N, V559I  
F115364 F115364 None None   V35T, K49R, V60I, D121H, K122E, I135T, D177E, I178M, T200I, Q207D, R211K, P243A, V245K, D250E, S251C, A272P, K275R, K277R, L282C, T286A, I293V, P294T, E297K, G335A, P345Q, F346Y, R356K, A360T, T377H, T386I, K390R, A400L, V435A, R461K, S468T, Q480E, H483N, L491S, K530R, A534S, Q547K, A554N, V559I K287P 
G074147 G074147 None None   E6K, V35T, E40D, V60I, K122E, D177E, I178M, T200I, Q207E, R211K, V245Q, D250E, A272P, K277R, Q278H, L282C, I293V, P321S, I329V, G333E, P345Q, F346Y, R356K, A360T, T369A, A371V, I375V, T377Q, S379C, K390R, A400T, E404Q, V435I, H483N, A534S, A554N, V559I  
G096800 G096800 None None   V35I, E36D, T39K, K49R, V60I, D121Y, K122E, I135L, D177E, Q207E, R211K, V245Q, D250E, A272P, V276I, K277R, L282C, L283I, T286A, I293V, K311R, G335D, P345Q, F346Y, R356K, A360T, T377Q, S379C, K385R, K390R, A400T, E404D, H483N, I505V, S519N, A534S, A554N, V559I  
G102498R15 G102498R15 None None   V35T, E36D, T39L, S48T, V60I, K122E, I135T, D177E, T200I, Q207E, R211K, F214FL, L228HQ, V245E, D250E, A272S, L282C, L283I, T286TA, V292I, Q334E, P345Q, F346Y, R356K, G359S, A360T, T377Q, S379C, K390R, A400T, Y405H, V435A, A446S, K454R, R461RK, Q480H, H483S, L491S, Q507H, I521IL, A534S, A554N, V559I  
G111006R15 G111006R15 None None   V35I, V60I, D121Y, K122E, I142V, T165I, D177E, I178M, Q207E, R211RK, K238KR, V241VI, V245EK, D250E, A272S, L282C, L283I, I293V, G335D, P345Q, F346Y, K347R, R356K, M357S, A360T, K366R, T377Q, S379C, K390R, A400T, E404D, V435I, A446S, N447S, S468P, H483N, A554S, V559I  
G115331 G115331 None None   V35T, T39K, V60I, D121H, K122E, I135R, D177E, I178M, T200I, Q207E, R211K, V245E, D250E, A272Q, L282C, T286A, I293V, D324E, G335D, P345Q, F346Y, R356K, A360T, K366R, T377Q, K390R, A400T, V417I, A446S, R448K, H483N, S519N, A534S, A554N, V559I  
G115399 G115399 None None   V35T, V60I, D121Y, K122E, S162Y, D177E, I178M, T200M, Q207E, R211K, D237E, V245Q, D250E, A272P, I274V, K275R, Q278H, L282C, T286A, I293V, G335D, P345Q, F346Y, R356K, A360T, T377Q, K390R, A400T, I434L, A437V, T470N, D471E, Q480H, H483L, L491P, I495V, S519N, A534S, A554N  
G115404 G115404 None None   E6T, K11Q, V35T, K49R, V60I, S68N, D121Y, K122E, R125K, I135V, S162H, D177E, T200M, Q207E, R211K, V245E, D250E, S268C, A272P, K277R, L282C, L283I, T286A, I293V, E297K, G335D, P345Q, F346Y, R356K, A360T, T377Q, S379C, K390R, A400T, L452I, V466I, H483N, A534S, A554N, V559I  
H006032 H006032 None None   E6K, K20R, V35T, T39M, I47X, K49R, V60I, D121Y, K122E, I135T, I159V, D177E, G196E, Q207E, R211K, V245E, D250E, A272S, T286A, I293V, T338S, R356K, M357T, T377L, S379G, T386M, K390R, A400T, H483N, E492T, A554Q, I556V  
H059862 H059862 None None   E6D, V35I, V60I, S68G, D121H, K122E, I135T, D177E, V189A, T200Q, Q207E, R211K, V245E, D250E, A272P, K277R, L282C, G335D, P345Q, F346Y, R356K, G359S, T377Q, S379C, K390R, A400T, E432D, V435I, N447H, D471E, H483Y, L491S, Q509H, S519N, Q524K, K527G, E529D, A534S, A554N  
H073402 H073402 None None   V35T, E40D, V60I, K64R, K104N, D121H, K122E, D123E, K173A, Q174K, D177E, T200A, Q207A, R211S, F214L, V245E, D250E, K281R, T286A, E291D, V292I, I293V, P294T, G335D, R356K, M357K, R358K, G359S, A371V, I375V, A376V, T377M, T386S, K388R, A400T, T403M, E404D, E432D, V435A, D471E, Q480H, L491S, I495V, Q509H, S519N, Q524K, K527E, E529D, K530R, A534S, A554S  
H096194 H096194 None None   V35T, T39M, V60I, D121Y, K122E, D123E, I135T, I142V, T200Q, Q207G, R211K, V245R, D250E, A272P, L282C, I293V, G335D, P345Q, F346Y, R356K, M357S, A360T, T377Q, S379C, K390R, A400T, V435I, N447S, V467I, S468P, H483N, A534S, A554N, V559I  
H109402R16 H109402R16 None None   I5V, K11Q, V35R, V60I, K101R, I135T, S162C, D177E, T200I, Q207E, R211K, V245K, K249Q, D250E, A272P, K277R, L282C, T286A, I293V, G335D, P345Q, F346Y, R356K, A360T, T377Q, S379C, K390R, A400T, E404D, V467I, H483N, L517I, S519N, I521V, A534S, A554S  
H115332 H115332 None None   K11T, V35T, V60I, D121C, K122E, D123N, K173S, D177E, V179I, T200A, I202V, Q207A, R211K, V245Q, E248D, A272P, L282C, L283I, I293V, E312D, G335D, M357K, R358K, G359S, A371V, I375V, A376V, K390R, A400T, E432D, V435I, N447S, L452S, S468A, D471E, Q480H, H483Y, L491S, L503I, K512R, L517I, Q524E, K527R, E529D, A534S, A554S, V559I  
H115366 H115366 None None   P4N, E28K, K32E, V35T, T39S, K49R, V60I, K104R, V118I, D121Y, K122E, I135T, R172K, K173Q, E194D, T200I, E204K, Q207E, R211K, F214L, V245K, D250E, A272P, L282C, T286A, E297K, I326V, P345Q, F346H, R356K, M357R, A360T, Q367E, A371V, T377Q, K390R, E399D, A400T, T403M, V435T, K454R, V467I, I482V, H483N, A502V, A534S, A554N, V559I  
H115390 H115390 None None   K11T, K20R, V21I, V35T, T39E, K122E, D123S, K173S, Q174K, D177E, V179I, I202V, Q207A, R211S, V245Q, K281R, T286A, E291D, V292I, I293V, E297M, A299X, E300X, L301X, L303M, E312D, I329V, G335D, M357K, G359S, K366R, A371V, I375V, A376V, A400T, T403M, E404D, E432D, V435I, A437V, T470N, D471E, T477A, Q480H, H483Y, L491S, K512R, S519N, Q524K, E529D, A534S, A554S, V559I E302Q 
J005965 J005965 None None   V35T, K49R, V60I, D121Y, K122E, K173R, D177E, I178M, T200I, Q207E, R211K, V245I, D250E, I257L, A272P, K277R, L282C, T286A, I293V, G335D, P345Q, F346Y, R356K, M357L, T377Q, S379C, K390R, A400I, V435I, R461K, H483N, A554N, V559I  
J036927 J036927 None None   V35T, S48T, V60I, K122E, D177E, I178M, G196E, T200I, Q207E, R211K, V245K, E248D, D250E, A272P, V276I, L282C, L283I, T286A, I293V, K311N, G335D, P345Q, F346Y, K347R, R356K, M357K, R358K, A360T, T377Q, S379C, K390R, E399D, A400T, E404D, F440Y, S468T, K476R, H483N, L491S, K512T, L517V, A534S, A554N, V559I  
J056339 J056339 None None   P4S, K11T, K20R, V21I, V35T, T39K, V60I, K122E, D123S, I135T, S162A, D177E, Q197L, Q207G, R211K, V245Q, E248N, Q278H, T286A, E291D, I293V, P294T, G335D, M357R, G359S, T369A, A371V, I375V, A376V, T377M, K390R, A400T, T403M, E404D, E432D, V435P, D471E, Q480H, H483Y, L491S, I495V, S519N, Q524K, K527G, E529D, A534S, A554N, V559I  
J068502 J068502 None None   V35T, E40D, K49R, I50V, V60I, D121H, K122E, T165I, K173Q, D177E, I178M, Q207A, R211K, E248N, A272P, K277R, L282C, L283I, I293V, G335D, P345Q, F346H, R356K, M357L, A360T, I375V, T377Q, S379C, I380V, K390R, A400T, V435I, R448K, V458I, H483N, L491S, L517I, S519N, K527S, A534S, A554S  
J096658 J096658 None None   K20R, V35T, T39A, E40D, S48T, K122E, D123S, K173A, Q174K, D177E, Q207K, R211S, V245Q, A272T, K281R, T286A, E291D, V292I, I293V, P294T, E312N, I326T, Q334H, G335D, M357K, G359S, A371V, I375V, A376V, T377M, T386A, A400T, T403M, E404D, E432D, V435E, H483N, E516D, S519N, K527T, K530R, A554N, V559I  
J107356R15 J107356R15 None None   V35I, K49R, V60I, K104X, D121H, K122E, I135T, I142V, D177E, Q207E, R211K, I244IV, V245T, A272P, K277R, L282C, T286A, A288T, I293V, G335D, P345Q, F346Y, R356K, T377Q, K385KR, K390R, A400T, E432D, A437AV, V458I, R461K, T470A, D471E, Q480H, H483Y, L491S, S519N, E529K, A534S, A554S, V559I  
J107479R15 J107479R15 None None   V35T, E40D, K49R, V60I, D121Y, K122E, D177E, I178M, T200I, Q207E, R211K, P243S, V245K, D250K, G262E, A272P, K277R, L282C, L283I, T286S, I293V, P294A, E297A, G335D, P345Q, F346H, R356K, M357S, R358K, A360T, I375V, T377Q, S379C, K390R, A400T, V435I, V467I, L469I, H483N, V496I, E516D, A534S, A554N, V559I  
J107885R15 J107885R15 None None   V21I, V35T, E36A, T39E, V60I, K102Q, K122E, D123S, K166R, K173A, D177E, I178M, T200A, Q207E, R211K, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359A, T377L, K390R, A400T, T403S, E404D, A437V, L452K, D471E, H483Q, L491S, S519N, K527N, K530R, A554KN  
J108076R15 J108076R15 None None   V35T, E36A, T39E, S48T, K122E, D123S, A158S, K166R, K173A, D177E, T200A, I202V, Q207E, P243T, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, Q334R, G335D, P345Q, F346H, R356K, G359T, T377Q, K390R, E404D, L452M, V466I, D471E, H483K, L491S, L517I, S519N, Q524E, E529D, A534S, A554S  
J108092R15 J108092R15 None None   V35T, E36A, T39E, K122E, D123N, I142T, A158S, S162A, K173A, Q174K, D177E, I178M, T200A, Q207K, V245Q, D250E, A272P, K277R, E291D, V292I, I293V, G335D, R356K, G359T, T377Q, K390R, E399D, A400I, E404D, A437V, L452K, V458I, T470N, D471E, H483Y, L491S, S519N, K530R, V531I, A554N  
J108432R15 J108432R15 None None   V35T, E40ED, K43KN, K49R, V60I, D121Y, K122E, D177E, I178M, T200M, E203D, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, L283LI, T286X, I293V, E297EQ, G335D, P345Q, F346Y, R356K, M357L, A360T, T377Q, S379SC, K390R, A400T, K451X, L452X, V466I, H483N, K530R, A534S, A554KN, K558R, V559I  
J109429R16 J109429R16 None None   V35T, T39R, K49R, V60I, D177E, Q207E, R211K, P243S, V245K, D250E, A272S, K277R, L282C, L283I, T286A, E291A, I293V, Q334E, G335N, P345Q, F346Y, R356K, A360T, T377Q, K390R, A400T, E404D, L452I, H483N, S519N, I522IV, E529EK, A534S, A554N, V559I  
J109893R15 J109893R15 None None   K32R, V35T, E40D, D121H, K173S, Q174K, D177E, I178M, V179I, Q207A, R211S, V245E, E248D, D250E, A272P, V276I, K281R, T286A, E291D, V292I, I293V, E312D, G335D, M357K, R358K, G359A, V365I, T369A, A371V, I375V, A376V, K390R, E396D, A400T, T403M, E404D, I411L, E432D, V435A, V467I, D471E, Q480H, L491S, K512R, E514D, S519N, Q524K, E529D, A534S, A554S  
J109932R15 J109932R15 None None   E6K, V35T, V60I, K122E, D177E, I178M, Q207E, R211K, V245Q, D250E, A272P, K275Q, L282C, K311KR, Y319F, Q334P, G335D, P345Q, F346H, A355S, R356K, M357L, T377Q, K385R, K390R, A400T, E404D, V435VA, R448K, V466I, H483N, L491LS, L517I, A534S, A554N, K558R, V559I  
J110257R15 J110257R15 None None  E138A P4T, K20R, V35T, T39TI, K49R, V60I, K102R, D121Y, K122E, I135T, N175H, D177E, I178L, T200I, E204K, Q207E, R211K, F214L, I244V, V245T, E248N, D250E, A272P, V276I, K277R, L282C, L283I, I293V, E297A, G335D, P345Q, F346Y, R356K, T377Q, S379C, T386I, K390R, A400T, V435I, K454KR, V467I, H483Y, A502G, S519N, A534S, A554N, V559I  
J111008R15 J111008R15 None None   P4T, K20R, V21I, V35T, T39M, K49R, V60I, K122E, D123N, I135T, E169D, K173L, Q174K, D177E, I178V, V179I, G196E, T200A, I202V, Q207A, I244V, V245Q, E248D, A272G, K277R, T286A, E291D, I293V, P294T, L295M, E312X, G335E, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, T386S, A400T, T403M, E404D, E432D, V435A, A437V, L452I, D471E, Q480H, H483Y, L491S, K512R, Q524E, K527R, E529D, A534S, A554N, K558R  
J115367 J115367 None None   E6P, V35T, S48T, V60I, K122E, I135T, S162C, E169D, D177E, Q207E, R211K, V245E, D250E, T286A, A288S, I293V, E297Q, P345Q, F346Y, R356K, G359S, A360T, A376G, T377Q, K390R, A400T, Y405H, V417T, V435E, H483N, L491S, L517V, S519N, V531I, A534S, A554N  
J115422 J115422 None None   V35T, K43N, V60I, D121H, K122E, I142V, D177E, I178V, G196E, Q197K, Q207E, V245T, E248N, V276I, T286A, A288S, G335D, R356K, M357Q, T377Q, S379C, K390R, A400I, E404D, E432D, V435I, K454R, D471E, Q480H, L491S, E516Q, S519N, A534S, A538X, H539X, E546D, A554N, V559I  
K004814 K004814 None None   K20R, V35T, E40D, K49R, V60I, K122E, D123G, D177E, I178M, Q207E, R211K, V245E, A272P, T286A, I293V, E297Q, P313V, Q334H, G335D, R356K, M357T, V365I, K366R, T377L, T386I, K390R, A400T, Q428K, V435P, F440Y, R463K, V467I, D471E, H483Q, L491P, I495V, S519N, K530R, A534S, A554R  
K023344R15 K023344R15 None None  K103N E6D, V35T, K49R, V60I, D121C, K122E, D177E, I178M, D192N, Q207E, R211K, P243S, V245K, D250E, A272P, K277R, L282C, L283I, I293V, G335D, P345Q, F346Y, R356K, M357MR, A360T, A376S, T377Q, S379C, K390R, K395R, A400T, V435M, S468P, H483N, A534S, A554N, V559I A288M 
K038847R15 K038847R15 None None   V35T, V60I, D177E, T200I, Q207E, R211K, F214FL, V245K, E248D, D250E, A272P, K275Q, K277R, L282C, I293V, Q334H, G335D, P345Q, F346Y, R356K, Q367L, A376S, T377Q, S379C, K390R, A400I, E404D, V435I, L452E, R461X, R463RK, V467I, L469I, H483N, L517I, S519N, A534S, A554K  
K038847R16 K038847R16 None None   V35T, V60I, D177E, T200I, Q207E, R211K, V245K, E248D, D250E, A272P, K275Q, K277R, L282C, I293V, Q334H, G335D, P345Q, F346Y, R356K, Q367L, A376S, T377Q, S379C, K390R, A400I, E404D, V435I, L452E, V467I, L469I, H483N, L517I, S519N, A534S, A554K  
K049065R16 K049065R16 None None   V35T, T39I, V60I, D121Y, K122E, D177E, I178M, I180V, T200M, Q207E, R211K, V245E, D250E, A272P, K277R, L282C, L283I, T286A, I293V, G335D, P345Q, F346Y, R356K, A360T, T377Q, K390R, A400T, I434L, A437V, L452I, V466I, H483N, L491S, A534S, A554N, V559I  
K051783R15 K051783R15 None None   P4T, V35T, K49R, V60I, D121Y, K122E, D123E, I142V, T165I, K166R, D177E, T200I, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, L283I, I293V, G335D, P345Q, F346N, R356K, M357T, R358S, I375V, T377Q, S379C, T386I, K390R, A400T, T403M, K431Q, V435L, L452M, K454R, K465R, H483N, A502V, S519N, Q520E, A534S, A554S, V559I E370R 
K051830R15 K051830R15 None None   V35T, E40D, K49R, K104R, D121H, K122E, D123DE, T165I, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245VI, E248N, Q278QH, K281R, E291D, V292I, I293V, P294T, F346Y, M357V, G359S, A376S, T377L, S379G, T386I, K390R, E399ED, A400T, E404D, V435I, V458I, H483N, K527N, V548I, A554S  
K058005R16 K058005R16 None None   K20R, V35VI, K49R, V60I, V90I, D121Y, K122E, D177E, V179I, T200I, Q207E, R211K, K238R, V245K, D250E, A272P, Q278H, K281R, L282C, L283I, V292I, I293V, P345Q, F346Y, R356K, M357T, G359GS, A360T, T377Q, S379C, K390R, E396D, A400T, L469I, H483N, L491S, A534S, A554N, V559I  
K061825R16 K061825R16 None None   K32R, V35T, V60I, D121H, I135T, I142V, K166R, Q174K, D177E, E194D, Q197K, Q207E, R211K, V245K, D250E, S251I, A272P, K277R, L282C, L283I, I293V, E297A, G335D, P345Q, F346Y, R356K, A360T, T377Q, S379C, T386A, K390R, A400T, E404N, V417I, H483N, A502G, S519N, A534S, A554N, V559I  
K081952R15 K081952R15 None None  V179E V35T, E36A, T39E, D123S, A158S, K173A, Q174K, D177E, T200A, Q207E, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V, A304E, K311R, Q334H, G335D, F346C, R356K, G359T, T377Q, K390R, A400T, T403S, E404D, V435L, A437AV, L452KQ, D471E, H483Q, L491S, S519N, K530R, A554T  
K084224 K084224 None None   V35T, T39N, V60I, D121Y, K122E, D123E, S162C, K173R, Q174K, T200I, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, T286A, I293V, G333E, G335S, P345Q, F346Y, R356K, A360T, T377Q, S379C, K390R, A400T, L452V, K454R, H483N, L491P, A502S, A534S, A554N, V559I  
K094463 K094463 None None   V35I, S48T, V60I, D121Y, K122E, Q174E, D177E, I178V, V179I, T200A, Q207E, R211K, V245N, D250E, A272P, K277R, L282C, L283I, I293V, D324E, G335D, P345Q, F346Y, R356K, M357T, A360T, T377Q, S379C, K390R, A400T, E404G, K454R, H483N, A502V, L517I, S519N, I526V, E529D, A534S, A554N D237T 
K103624R15 K103624R15 None None   K11T, K20R, V21I, V35T, T39R, V60I, D121H, K122E, I135V, D177E, I178M, T200A, Q207E, P243A, V245K, D250E, A272P, K277R, L282C, T286A, I293V, P294T, E297K, I329L, G335D, P345Q, F346Y, R356K, A360T, A376S, T377Q, T386I, K390R, A400I, V435A, R448K, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, K558R K287P 
K104483R16 K104483R16 None None   V35T, T39M, V60I, S68G, D177E, I178M, T200A, Q207E, V245T, A272P, L282C, I293V, A304E, G335D, P345Q, F346Y, R356K, M357Q, A360T, T377Q, T386A, K390R, E399EK, A400T, E432D, V435I, H483N, L491S, S519N, Q524E, E529D, A534S, A554S, V559I  
K107420R15 K107420R15 None None   V35T, E36A, T39E, S48E, I142IV, K173T, Q174K, D177E, T200A, Q207E, R211K, P243T, V245Q, E248D, D250E, A272P, K277R, E291D, V292I, I293V, K311R, G335D, R356K, G359T, A371V, A376T, T377M, K390R, A400T, E404D, V435L, N447S, L452M, V466I, D471E, H483Q, L491T, L517LI, S519N, K530R, A534S, A554S  
K108750R15 K108750R15 None None   V35T, E40D, K49R, V60I, K122E, I142V, K173T, Q174K, D177E, I178M, T200A, Q207D, R211K, V245Q, E248D, A272P, K277KR, L282C, T286A, I293V, K311R, G335D, R356K, M357R, G359T, A360AT, T377L, K390R, A400T, V435L, T470E, H483N, L491S, L503I, L517LI, S519N, K527N, A534S, A554X  
K109250R15 K109250R15 None None   V21I, V35T, V60I, K122E, D123N, K166KR, K173S, V179I, I202V, Q207A, R211S, V245Q, E248D, A272P, K277R, T286A, E291D, I293V, P294A, E297M, A299X, E300X, L301X, L303M, K311KR, G335D, M357K, R358K, G359S, A371V, I375V, A376V, T377L, K390R, E399D, A400T, E404D, E432D, V435P, S468P, D471E, Q480Y, H483F, L491S, L517I, S519N, Q524K, K527G, E529D, K530R, A534S, A554S, V559I E302Q 
K109878R15 K109878R15 None None   K11KIN, V35T, V60I, D121Y, K122E, D177E, T200I, Q207E, R211K, K238R, V245E, D250E, A272P, K277R, L282C, L283I, I293V, E297A, G335D, P345Q, F346Y, R356K, A360T, K366R, K374R, A376V, T377H, S379C, K390R, A400T, V435VI, K454KR, R461K, H483N, S519N, E529D, A534S, A554N, V559I  
K110070R15 K110070R15 None None   E6D, V35T, K43R, V60I, K122E, D123G, I135T, K173L, Q174K, D177E, V179I, I202V, Q207A, R211S, V245E, D250E, T286A, E291D, V292I, I293V, E312D, V317A, Q334K, G335D, M357Q, G359S, A360T, A371V, I375V, A376V, T377M, A400T, T403M, E404D, E413D, E432D, V435A, D471E, K476R, Q480H, H483Y, L491S, I505V, K512R, E514D, S519N, Q524K, K527G, E529D, V531VI, A534S, A554AS  
K110096R15 K110096R15 None None   K11T, K32R, V35T, K49R, K122E, D123N, I135T, K173S, D177E, I178M, V179I, T200A, Q207A, V245N, K281R, T286A, E291D, I293V, E297KM, A299X, E300X, L301X, L303M, E312D, V317T, G335D, M357K, G359S, K366R, A371V, I375V, T377Q, T386A, A400T, T403M, E404D, E432D, V435A, F440Y, K451R, V458I, V467I, Q480H, L491S, E514D, S519N, Q524K, K527G, E529D, A534S E302Q 
K110193R15 K110193R15 None None  K101E V35T, K49R, V60I, K122E, I135R, S162C, D177E, I178M, T200A, Q207G, R211K, D237N, V245Q, D250E, A272Q, L282C, T286A, I293V, K311R, G335D, P345Q, F346Y, K347R, R356K, A360T, T377Q, S379C, K390R, A400T, T403A, A446S, H483N, S519N, A534S, A554N, V559I T84A 
K110193R16 K110193R16 None None  K101E V35T, K49R, V60I, K122E, I135R, S162C, D177E, I178M, T200A, Q207G, R211K, D237N, V245Q, D250E, A272Q, L282C, T286A, I293V, G335D, P345Q, F346Y, K347R, R356K, A360T, T377Q, S379C, K390R, A400T, T403A, A446S, H483N, S519N, A534S, A554N, V559I  
K110258R15 K110258R15 None None   V35T, V60I, K104R, D121H, K122E, D177E, I178L, T200I, Q207E, R211K, V245M, D250E, A272P, L282C, G335D, P345Q, F346Y, K347R, R356K, M357L, A360T, T377Q, S379C, K390R, A400T, V435I, A437V, H483N, S519N, A534S, A554N, V559I  
K110274R15 K110274R15 None None   K20R, V35T, T39A, E40D, K49R, V60I, D121Y, K122E, I135T, E169D, D177E, G196E, T200TI, Q207E, R211K, F214L, V245K, D250E, V276I, K277R, L282C, T286A, E297A, I326V, G335D, P345Q, F346Y, R356K, M357L, T377Q, S379C, K390R, A400T, V435I, R461K, H483N, S519N, A534S, A554N, V559I  
K110282R15 K110282R15 None None   V35T, T39A, E40D, K102Q, K122E, D123N, I142V, K173S, Q174K, V179I, T200A, Q207A, R211S, F214L, V245VI, E248N, D250DE, I257L, A272P, K277T, L282C, I293V, E298G, G335D, M357R, R358K, G359S, K366R, A371V, A376T, T377L, K390R, A400ST, T403R, E404D, E432ED, D471E, Q480H, H483Y, L491S, I495V, K512R, S519N, Q524K, K527A, E529D, K530R, A534S, A554S  
K110842R15 K110842R15 None None   V35T, V60I, D121Y, K122E, D177E, I178M, L193F, Q207E, R211K, V245T, D250E, A272Q, L282C, L283I, I293V, G335D, T338S, P345Q, F346Y, R356K, M357T, A360T, E370A, T377Q, S379C, K390R, A400T, T403A, V435VA, A437AV, R448K, H483N, L491S, S519N, A534S, E546D, A554N, V559I  
K110876R15 K110876R15 None None   E6K, K11KN, V35T, E36D, T39I, V60I, K122E, D123N, I135T, D177E, T200I, Q207E, R211K, V245K, D250E, S251I, A272S, K281R, L282C, L283I, T286A, I293V, I326V, I329V, G335D, P345Q, F346Y, R356K, A360T, T377Q, S379C, K390R, A400T, S468T, T470TN, H483N, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, V559I  
K110999R15 K110999R15 None None M184V K103S, G190A V35T, K43N, V60I, V75L, K122E, D123S, D177E, T200I, Q207E, R211K, V245S, D250E, A272P, K277R, L282C, L283I, I293V, G335D, P345Q, F346Y, R356K, M357S, A360T, T377Q, S379C, A400T, E404D, E432D, V435E, A437V, D471E, Q480H, H483Y, L491S, Q509Y, K512R, E516Q, S519N, K527G, E529D, A534S, A554N, V559I  
K111588R15 K111588R15 None None   K11S, V35T, E40D, K49R, K122E, D123N, K173S, Q174K, D177E, T200A, I202V, Q207A, P243S, I244V, V245K, L283I, I293V, P294T, L295M, E297X, A299X, E300X, L301X, L303M, E312T, Q334H, G335D, M357K, G359S, K366R, T369X, A371V, I375A, T377M, T386I, A400T, T403M, E404D, K431R, V435L, F440Y, R463K, T470P, D471E, Q480H, H483L, Q507H, E514D, L517V, S519N, Q524K, K527KE, E529D, A534S, A554S E302Q 
K114680R16 K114680R16 None None M184V K101E, G190A E6KN, K32E, V35R, K49R, V60I, K122E, I135K, T139L, D177E, E194D, T200IR, Q207G, R211K, V245K, D250E, A272P, V276VI, K277R, L282C, L283I, T286A, I293V, G335D, P345Q, F346Y, R356K, G359S, T377L, S379C, K390R, A400T, V435I, V458I, H483N, A534S, A554N, V559I  
K114915R16 K114915R16 None None  K103N V35T, V60I, D121Y, K122E, S162C, D177E, I178M, T200A, Q207A, R211S, V245M, E248D, D250E, A272P, K277R, L282C, I293V, E297A, K311R, G335D, P345Q, F346Y, R356K, R358K, A360T, V365I, E370G, A376T, T377Q, S379C, T386A, K390R, A400I, V435I, V466I, S468P, T470N, H483K, Q487E, L491S, K512N, L517I, S519N, Q524K, K527E, E529D, A534S, A554N, V559I  
K115326 K115326 None None   K11T, K20R, V21I, V35T, T39R, K49R, V60I, K122E, D123N, E169D, D177E, I178M, V179I, I202V, Q207A, E248D, T286A, E291D, V292I, I293V, P294T, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377L, A400T, E404D, E432D, L452I, D471E, Q480H, L491S, S519N, Q524K, K527G, E529D, K530R, A534S, A554S  
K115368 K115368 None None   V35T, E36A, V60I, D121H, K122E, I135T, Q145C, K173N, G196R, T200E, I202V, Q207R, R211K, V245K, D250E, A272P, K277R, L282C, L283I, T286A, A288S, A304E, S322A, I329V, G335D, P345Q, F346Y, R356K, A360T, T377Q, S379C, T386I, K390R, A400T, T470A, H483N, L491S, L517V, S519N, A534S, A554N, V559I  
K115407 K115407 None None   E6D, V8I, K11Q, V35T, V60I, D121H, K122E, D123S, I135T, K173I, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q, D250E, V276I, L283I, T286A, E291D, I293V, P294T, L295M, E297M, A299X, E300X, L301X, L303M, E312D, G335D, R356K, M357K, G359S, I375V, T377I, K390R, A400T, T403M, E404D, E432D, A446S, T470N, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554S, K558R E302Q 
K185000 K185000 None None   V35T, K49R, V60I, D177E, I178M, T200I, Q207E, R211K, V245M, A272P, K277R, L282C, L283I, I293V, D324P, G335D, P345Q, F346Y, K347R, R356K, M357S, A360T, T377Q, S379C, K390R, A400T, V435I, A437V, H483N, S519N, A534S, A554S K388Q