Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Wu (2019)
Title Phylogenetic analysis highlights the role of older people in the transmission of HIV-1 in Fuyang, Anhui Province, China.
Citation BMC Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 362
NumPts 362
Subtype CRF07_BC, B, CRF01_AE, CRF08_BC, C, CRF55_01B, CRF67_01B, CRF68_01B, G, A, CRF62_BC

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 362 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
HETE.XZDfFY055 HETE.XZDfFY055 None    G16A, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
HETE.XZDfFY059 HETE.XZDfFY059 None    E35D, R41K, D60E, Q61QK, I62IV, L63P, H69HR, V77I, I93L  
HETE.XZDfFY063 HETE.XZDfFY063 None    T12N, L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89M, I93L  
HETE.XZDfFY106 HETE.XZDfFY106 None    L10IV, T12TA, E35D, M36I, R41K, H69K, L89M  
HETE.XZDfFY109 HETE.XZDfFY109 None    P39S, R41K, L63P, I72V, I93L  
HETE.XZDfFY117 HETE.XZDfFY117 None    T12P, L19V, E35D, R41K, L63P, V77I, I93L  
HETE.XZDfFY139 HETE.XZDfFY139 None    T12S, K14R, I15V, L19T, M36I, R41K, L63P, H69K, I72IV, I93L  
HETE.XZDfFY170 HETE.XZDfFY170 None    L19V, N37D, K45KR, I64V, I72V, Q92K  
HETE.XZDfFY175 HETE.XZDfFY175 None    L19V, E35D, I62V, L63P, A71T, I72V, V77I, V82I, I93L  
HETE.XZDfFY199 HETE.XZDfFY199 None    E35D, R57K, I62V, L63P, C67Y, G68E, A71V, I72V, V77I, I93L  
HETE.XZDfFY231 HETE.XZDfFY231 None    E35D, I62V, L63P, A71T, I72V, V77I, I93L  
HETE.XZDfFY235 HETE.XZDfFY235 None    T12A, L19V, E35D, L63P, A71T, I72V, V77I, I93L  
HETE.XZDfFY268 HETE.XZDfFY268 None    L10I, L19V, E35D, L63P, K70Q, A71AT, I72V, P79S, I93L  
HETE.XZDfFY304 HETE.XZDfFY304 None    I13V, G17E, Q18H, K20R, E35D, M36I, R41K, H69K, L89M  
HETE.XZDfFY334 HETE.XZDfFY334 None    Q7QH, L10V, T12A, L19V, E35D, L63P, A71T, I72V, V77I, I93L  
HETE.XZDfFY363 HETE.XZDfFY363 None    E35D, R41K, D60E, L63P, I72V, V77I, I93L  
HETE.XZDmFY013 HETE.XZDmFY013 None    T12A, L19V, E35D, R41K, R57K, D60E, I62IV, L63PS, A71V, V77I, I93L  
HETE.XZDmFY017 HETE.XZDmFY017 None    L10V, T12A, L19V, E35D, R57RK, L63S, A71T, I72V, V77I, I93L  
HETE.XZDmFY026 HETE.XZDmFY026 None    K14R, L19T, L63P, E65D, I72V, V77I, I93L  
HETE.XZDmFY034 HETE.XZDmFY034 None    E35D, N37D, R41K, L63P, I93L  
HETE.XZDmFY040 HETE.XZDmFY040 None    L10I, E35ED, R41K, D60E, Q61E, L63P, V77I, I93L  
HETE.XZDmFY042 HETE.XZDmFY042 None    I13IV, R41K, D60DE, L63P, V77I, I93L  
HETE.XZDmFY045 HETE.XZDmFY045 None    E35D, R41K, D60E, L63P, A71V, P79S, I93L  
HETE.XZDmFY082 HETE.XZDmFY082 None    I62V, L63P, I72V, V77I, I93L  
HETE.XZDmFY102 HETE.XZDmFY102 None    T12TK, L19LV, E35D, M36I, R41K, K45R, D60E, I62IV, L63P, K70Q, I72IT, I93IL  
HETE.XZDmFY105 HETE.XZDmFY105 None    T12P, L19V, E35D, R41K, L63P, A71T, I72V, V77I  
HETE.XZDmFY126 HETE.XZDmFY126 None    L10LI, T12S, I13IV, I15IV, G16E, L19I, M36I, R41K, D60E, L63ST, I64IL, H69K, L89M, I93L  
HETE.XZDmFY128 HETE.XZDmFY128 None    E35D, R41K, R57K, D60E, I62V, L63P, I93L  
HETE.XZDmFY133 HETE.XZDmFY133 None    L19I, M36I, R41K, H69K, K70R, V82I, L89M, I93L  
HETE.XZDmFY168 HETE.XZDmFY168 None    E35D, N37D, R41K, L63P, I93L  
HETE.XZDmFY174 HETE.XZDmFY174 None    E35D, R41K, K45KR, D60E, L63P, V77I, I93L  
HETE.XZDmFY177 HETE.XZDmFY177 None    L10I, L19V, E35D, R41K, L63P, V77I, I93L  
HETE.XZDmFY179 HETE.XZDmFY179 None    Q7QR, L10I, T12A, K14KR, L19V, E35ED, I62IV, L63LP, I72V, V77I, I93L  
HETE.XZDmFY192 HETE.XZDmFY192 None    I13V, E35D, R41K, R57K, D60DE, L63P, A71V, V77VI, I93L  
HETE.XZDmFY204 HETE.XZDmFY204 None    L19V, E35D, R57K, L63A, A71T, I72V, V77I, V82I, I93L  
HETE.XZDmFY210 HETE.XZDmFY210 None    L10I, L19V, E35D, N37NT, R41K, Q61QH, L63PS, I64IV, V77I, P79PS, I93L  
HETE.XZDmFY217 HETE.XZDmFY217 None    K43R, L63P, A71T, I72E, V77I, I93L  
HETE.XZDmFY224 HETE.XZDmFY224 None    K14KR, E35D, M36I, R41K, K45R, D60E, I62V, L63P, K70Q, I93L  
HETE.XZDmFY254 HETE.XZDmFY254 None    L10V, L19V, E35D, L63P, A71T, I72V, V77I, I93L  
HETE.XZDmFY270 HETE.XZDmFY270 None    V11I, L19V, E35D, I62V, L63P, A71T, I72V, V77I, V82I, I93L  
HETE.XZDmFY277 HETE.XZDmFY277 None    E35D, R41K, D60E, I62V, L63P, I93L  
HETE.XZDmFY279 HETE.XZDmFY279 None    L10I, L19V, E35D, L63P, K70KQ, I72E, V77I, I93L  
HETE.XZDmFY280 HETE.XZDmFY280 None    T12P, L19V, E35D, L63S, A71T, I72V, V77I, I93L  
HETE.XZDmFY285 HETE.XZDmFY285 None    L19V, E35D, R57K, L63A, A71T, I72V, V77I, V82I, I93L  
HETE.XZDmFY300 HETE.XZDmFY300 None    I13V, G16E, K20R, E35D, M36I, R41K, I62IV, H69K, K70R, L89M  
HETE.XZDmFY312 HETE.XZDmFY312 None    I15V, R41K, R57K, D60E, L63PS  
HETE.XZDmFY322 HETE.XZDmFY322 None    L10LI, G16GE, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L  
HETE.XZDmFY361 HETE.XZDmFY361 None    E35D, R41K, D60E, L63P, I72V, V77I, I93IL  
HETE.XZDmFY382 HETE.XZDmFY382 None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
HETE.XZDmFY396 HETE.XZDmFY396 None    I13V, L19M, E35D, M36I, R41K, K45R, R57RK, L63S, H69K, L89M  
HETE.XZDmFY413 HETE.XZDmFY413 None    G16E, E35D, M36I, R41K, R57K, H69K, K70R, L89M  
MSM.XZDmFY015 MSM.XZDmFY015 None    E35D, N37D, R41K, D60E, L63P, I93L  
MSM.XZDmFY018 MSM.XZDmFY018 None    G16E, L19I, E35D, M36I, R41K, D60DE, L63M, H69K, V82I, L89M, I93L  
MSM.XZDmFY022 MSM.XZDmFY022 None    E35D, M36I, R41K, H69K, L89M  
MSM.XZDmFY035 MSM.XZDmFY035 None    I13V, M36I, R41K, H69K, K70R, V82I, L89M  
MSM.XZDmFY058 MSM.XZDmFY058 None    L19I, K20R, M36I, R41K, L63T, H69K, L89M, I93L  
MSM.XZDmFY064 MSM.XZDmFY064 None    T12N, L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89M, I93L  
MSM.XZDmFY090 MSM.XZDmFY090 None    E35D, R41K, K43R, D60E, Q61E, I62V, L63P, I93L  
MSM.XZDmFY100 MSM.XZDmFY100 None    T12P, L19I, E35D, M36I, R41K, L63P, H69K, I72V, V82I, L89M, I93L  
MSM.XZDmFY123 MSM.XZDmFY123 None    T12S, Q18L, L19V, E35D, R41K, D60E, L63P, I72IM, I93L  
MSM.XZDmFY125 MSM.XZDmFY125 None    T12S, L19I, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L  
MSM.XZDmFY146 MSM.XZDmFY146 None    I13V, G17E, E35D, R41K, D60E, I62V, L63P, A71V, I93L  
MSM.XZDmFY154 MSM.XZDmFY154 None    T12TA, E35D, R41K, L63P, I93L  
MSM.XZDmFY164 MSM.XZDmFY164 None    I15V, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
MSM.XZDmFY171 MSM.XZDmFY171 None    I13V, I15V, E35D, M36I, R41K, K43KR, L63S, H69K, L89M  
MSM.XZDmFY180 MSM.XZDmFY180 None    L10LV, I13V, G16E, E35D, M36I, R41RK, I62IV, L63X, H69K, K70KR, L89LM  
MSM.XZDmFY198 MSM.XZDmFY198 None    E35D, R41RK, R57K, I62V, L63P, C67X, G68GE, A71V, I72V, V77I, I93L  
MSM.XZDmFY207 MSM.XZDmFY207 None    E35D, N37D, R41K, D60E, L63P, I93L  
MSM.XZDmFY228 MSM.XZDmFY228 None    K20KR, E35D, M36I, R41K, R57RK, I62IV, H69K, L89M  
MSM.XZDmFY232 MSM.XZDmFY232 None    E35D, M36I, R41K, H69K, K70R, I72V, L89M, I93L  
MSM.XZDmFY243 MSM.XZDmFY243 None    I15V, E35D, M36MI, N37D, R57RK, L63P, I72IV, V77I, I93L  
MSM.XZDmFY249 MSM.XZDmFY249 None    E35D, M36I, R41K, D60E, L63P, K70Q, A71V, V77I, I93L  
MSM.XZDmFY263 MSM.XZDmFY263 None    T12P, E35D, R57K, L63P, C67S, A71T, I72V, V77I, I93L  
MSM.XZDmFY271 MSM.XZDmFY271 None    L10I, E35D, R41K, D60E, I62IV, L63P, A71AV, V77I, I93L  
MSM.XZDmFY297 MSM.XZDmFY297 None    L10I, I15V, E35D, M36I, R41K, R57K, L63M, H69K, L89M, F99L  
MSM.XZDmFY305 MSM.XZDmFY305 None    I15V, K20R, E35D, M36I, R41K, L63T, H69K, L89M, I93L  
MSM.XZDmFY309 MSM.XZDmFY309 None    E35D, M36I, R41K, L63T, H69K, I72T, L89M  
MSM.XZDmFY311 MSM.XZDmFY311 None    I13V, L33LV, E35D, R41K, D60E, L63P, I93L  
MSM.XZDmFY316 MSM.XZDmFY316 None    E35D, M36I, R41K, H69K, L89M  
MSM.XZDmFY328 MSM.XZDmFY328 None    E35D, R41K, D60E, Q61E, L63P, I93L  
MSM.XZDmFY336 MSM.XZDmFY336 None    L19M, K20R, M36I, R41K, L63T, H69K, L89M, I93L  
MSM.XZDmFY340 MSM.XZDmFY340 None    K20R, M36I, N37S, R41K, R57K, L63T, H69K, K70R, L89M, I93L  
MSM.XZDmFY350 MSM.XZDmFY350 None    E35D, R41K, D60E, I62V, L63P, I64L, V77I, I93L  
MSM.XZDmFY351 MSM.XZDmFY351 None    Q2QH, R41K, D60E, Q61E, L63P, A71V, V77I, I93L  
MSM.XZDmFY354 MSM.XZDmFY354 None    I13V, E35D, M36I, R41K, H69K, K70R, L89M  
MSM.XZDmFY355 MSM.XZDmFY355 None    T12A, E35D, R41K, D60E, I62V, L63P, V77I, I93L  
MSM.XZDmFY365 MSM.XZDmFY365 None    E35D, N37D, R41K, L63P, I93L  
MSM.XZDmFY370 MSM.XZDmFY370 None    E35D, R41K, D60E, Q61E, L63P, A71V, V77I, I93L  
MSM.XZDmFY375 MSM.XZDmFY375 None    L10I, I13V, G16GE, K20R, E35D, M36I, R41K, L63X, C67HY, H69K, L89M  
MSM.XZDmFY384 MSM.XZDmFY384 None    Q18E, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89M, I93L  
MSM.XZDmFY401 MSM.XZDmFY401 None    E35D, R41K, D60E, L63P, I72M, V82I, I93L  
MSM.XZDmFY418 MSM.XZDmFY418 None    E35D, N37D, R41K, D60E, L63P, I93L  
XZDFY084 XZDFY084 None    E35D, R41K, I62V, L63PS, V82I, I93L  
XZDFY119 XZDFY119 None    T12S, I13V, I15V, L19I, M36I, R41K, L63P, H69K, T74S, L89M, I93L  
XZDFY127 XZDFY127 None    T12P, L19Q, N37H, V77I, V82I, I93L  
XZDFY237 XZDFY237 None    I13V, I15V, K20I, E35Q, M36I, N37D, R41K, R57K, L63P, C67E, H69K, V77I, V82I, L89M  
XZDFY259 XZDFY259 None    L10I, T12K, L19V, L63P, K70Q, I72V, V77I, P79S, I93L  
XZDFY291 XZDFY291 None    T12P, L19V, E35D, L63P, A71T, I72V, V77I, I93L  
XZDFY341 XZDFY341 None    T12S, I15V, L19T, M36I, R41K, D60E, L63A, H69K, L89M, I93L  
XZDFY364 XZDFY364 None    T12P, L19S, E35D, R41K, D60E, L63P, I93L  

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