Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Temereanca (2017)
Title HIV transmission clusters among injecting drug users in Romania.
Citation Rom Biotechnol Lett
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 33
NumPts 33
Subtype F, G, B, CRF24_BG

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
IVN SA14 IVN SA14 None None   R211K, A272P, K277R, V292I, I293V, E300A  
IVN SA15 IVN SA15 None None   V35T, V60I, K122E, D123NS, K173I, Q174K, D177E, T200A, Q207K, R211Q, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A, Q334L  
IVN SA16 IVN SA16 None None   V35T, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, Q197K, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297I, I329V  
IVN SA17 IVN SA17 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, I195T, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA19 IVN SA19 None None   V35T, V60I, K122E, D123S, I135T, P170H, K173I, Q174R, D177E, T200A, Q207K, R211Q, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A, Q334L  
IVN SA20 IVN SA20 None None   V35T, V60I, R211K, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A  
IVN SA27 IVN SA27 None None   V35T, T39A, E40D, G45E, V60I, K102E, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA28 IVN SA28 None None   V35T, I50IV, E53ED, V60I, K122E, D123S, I135T, K173I, Q174K, D177E, D192DN, T200A, Q207E, V245Q, E248D, D250E, A272P, T286A, E291D, E297AT, I326L, Q330QP  
IVN SA29 IVN SA29 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, D192N, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A  
IVN SA33 IVN SA33 None None  V106I V35T, T39A, E40D, E53D, S68G, V90I, K104R, D123E, I135T, S162H, K166Q, E169R, K173E, Q174R, D177E, I178V, I195L, T200A, Q207E, V245Q, E248N, A272P, E291D, V292I, I293LV, E297A, I326V  
IVN SA34 IVN SA34 None None   V35T, T39TA, E40ED, V60I, K122E, D123S, I135T, K173I, Q174R, D177E, T200A, Q207K, R211Q, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A, Q334L  
IVN SA35 IVN SA35 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329IV  
IVN SA36 IVN SA36 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, L295LM, E297T, I329V  
IVN SA37 IVN SA37 None None   V35T, T39X, E40D, V60I, D123E, I135L, S162HY, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA38 IVN SA38 None None   V35VA, R211K, A272P, K277R, V292I, I293V, E297EA, E300EA, I309IV, V317VE, Q334QL  
IVN SA39 IVN SA39 None None   V35T, T39A, E40ED, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA40 IVN SA40 None None   V35T, T39A, E40D, V60I, K122R, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, D192N, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA41 IVN SA41 None None  V179E V35T, V60I, K122E, D123S, I135T, P170H, K173I, Q174R, D177E, T200A, Q207K, R211Q, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A, Q334L  
IVN SA42 IVN SA42 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA43 IVN SA43 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, D192N, G196E, T200A, E203EK, Q207EG, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA47 IVN SA47 None None   V35T, K43R, V60I, A98S, K122E, D123S, I135T, K173I, Q174K, D177EK, T200AE, Q207K, R211Q, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A, Q334L  
IVN SA48 IVN SA48 None None   V35T, V60I, K122E, D123S, I135T, K173I, Q174R, D177E, T200A, Q207K, R211Q, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A, Q334L  
IVN SA49 IVN SA49 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, D177N, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA50 IVN SA50 None None   V35T, V60I, K122E, D123S, I135T, K173I, Q174K, D177E, I178M, T200A, Q207K, R211Q, V245Q, E248D, D250E, A272P, K277R, V292I, I293V, E297A, Q334L  
IVN SA51 IVN SA51 None None  V106I V35T, T39A, E40D, V60I, S68G, K104R, D123E, S162Y, K166Q, Q174K, D177EG, I195L, T200A, Q207E, V245Q, E248N, A272P, K277KR, T286TA, E291D, V292I, I293V, P294PS, E297AT, I326V  
IVN SA52 IVN SA52 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, D177DEG, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SA53 IVN SA53 None None   V35A, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T  
IVN SA62 IVN SA62 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SR106 IVN SR106 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, V261I, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V K287KN 
IVN SR51 IVN SR51 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, I195IL, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SR53 IVN SR53 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  
IVN SR89 IVN SR89 None None   V35T, T39A, E40D, K49R, D123E, I135L, S162C, K173I, Q174K, D177E, Q197P, T200A, I202V, Q207A, R211K, V245Q, E248D, A272P, K275R, T286A, A288T, E291D, V292I, I293V, P294S, L295M, E297A, V317A, I329V, Q334E  
IVN SR98 IVN SR98 None None   V35T, T39A, E40D, V60I, D123E, I135L, S162Y, F171Y, K173A, Q174K, V179I, G196E, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297T, I329V  

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