Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kostrikis (2018)
Title HIV-1 transmission networks across Cyprus (2010-2012).
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 100
NumPts 100
Subtype B, A, F, C, CRF02_AG, CRF01_AE, CRF56_cpx, CRF13_cpx, G, CRF06_cpx

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
CY269 CY269 None    E35D, N37D, I62IV, L63LP, H69Y, A71T, I72V  
CY270 CY270 None    I13V, G16E, K20I, E35K, M36I, N37E, R41K, H69K, L89M  
CY271 CY271 None    T12S, I15V, L19V, M36I, R41K, H69K, T74A, L89M, I93L  
CY272 CY272 None    I13V, K14R, I15L, K20I, M36I, N37D, R41K, I64L, H69K, K70R, L89M  
CY273 CY273 None    N37D, I62IV, L63S, K70KN, A71V, V77I, I93L  
CY274 CY274 None  M46L  I15V, G17D, E35D, N37S, R41K, D60E, L63P, I93L  
CY275 CY275 None    T12N, I62V, L63P, I72V, V77I, I93L  
CY276 CY276 None    L10LI, I15IV, M36I, I62V, L63A, I64L, I93L  
CY277 CY277 None    L10LI, K14KR, I15V, M36I, I62V, L63A, I64ILM, I93L  
CY278 CY278 None    T12I, I15V, G16E, M36I, I62V, L63A, I93L  
CY281 CY281 None    L10I, K14KR, L19T, P39S, R41K, I62V, L63P, A71T, I93L  
CY282 CY282 None    N37T, R41K, R57K, A71V, I93L  
CY285 CY285 None    L10V, K14R, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M  
CY286 CY286 PI    N37T, R41K, R57K, A71V, I93L  
CY287 CY287 None    L10I, I13V, I15V, G16E, E35D, M36I, R57K, L63V, C67Y, H69K, L89M  
CY288 CY288 None    L10LI, N37S, R57K, L63P, V77I, I93L  
CY289 CY289 PI    L10V, T12Q, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T  
CY290 CY290 None    I15V, M36I, I62V, L63A, I64M, I93L  
CY291 CY291 None    L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63S, H69K, K70R, L89M  
CY292 CY292 None    K14R, E35D, M36I, N37D, R41K, H69K, L89M  
CY293 CY293 None    I13V, K14R, K20I, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
CY294 CY294 None    E35D, M36I, R57K, I62V, L63S, H69K, V82I, L89M  
CY295 CY295 None    E35D, M36I, R57K, I62V, L63S, H69K, V82I, L89M  
CY296 CY296 None    E35D, M36I, R57K, I62V, L63S, H69K, V82I, L89M  
CY299 CY299 None    I13V, K14R, K20I, M36I, R41K, I64IL, H69K, L89M  
CY301 CY301 None    I13V, K14R, G17E, K20I, M36I, L63S, I64L, H69K, K70R, L89M  
CY302 CY302 None    L10V, V11I, T12S, I13IV, I15IV, G16E, K20R, E35D, M36I, P39S, R41K, R57K, Q61D, L63T, E65D, I72T, L89M  
CY305 CY305 PI    T12X, K14R, I15V, G16E, E35D, P39T, R41K, L63P, A71V, I72IV, I93L  
CY307 CY307 None    I13S, K20I, E21EQ, E35D, M36I, N37ND, R41K, R57RK, L63LV, I64M, H69K, L89M T12*R 
CY308 CY308 None    I13V, I15V, E35D, M36I, N37NT, R41K, K45R, L63T, I72V, L89M  
CY310 CY310 None    T12P, I15V, G16E, M36I, Q61E, I62V, L63N, I64V, C67Y  
CY311 CY311 None    I13V, I15V, G16E, K20R, M36I, R41K, L63AT, G68E, H69R, I72V, L89M, T91V, I93L  
CY313 CY313 None    K14R, I15V, M36I, N37K, R41N, K45R, L63T, H69K, L89M, I93L  
CY314 CY314 None  M46L L10F, N83D I13V, G16E, K20R, A22V, L33I, E35D, M36I, N37D, L63T, G68E, H69R, L89M, T91V, I93L  
CY315 CY315 None    T12P, I15V, G16E, L19T, K20KR, M36I, N37S, R41K, L63T, H69KR, I93L  
CY316 CY316 None    T12S, L19I, E35D, M36I, R41K, K45R, D60E, L63P, H69K, L89M, I93L  
CY317 CY317 None    L10I, T12A, I13V, I15V, L19I, E35D, M36I, R41K, L63V, H69K, L89M  
CY318 CY318 None    I13IV, G16E, E35D, M36I, R41K, H69K, V77I, L89M, I93L  
CY319 CY319 None    T12S, K14R, I15V, L19T, E35D, M36I, N37NS, R41RK, L63T, H69K, V82I, I93L  
CY320 CY320 None    E35D, M36I, R57K, I62V, H69K, V82I, L89M L63Y 
CY321 CY321 None    K14R, I15V, L19F, E35D, M36I, R41K, R57K, I62V, L63T, E65D, T74S, L89M  
CY322 CY322 None    E35D, M36I, R57K, I62V, L63S, H69K, V82I, L89M  
CY323 CY323 PI    T12S, I15V, L19I, K20R, E35D, M36I, R41K, R57K, I62IV, L63T, E65D, I72T, V82I  
CY324 CY324 None    K14R, E35D, M36I, R41K, H69K, V77I, L89M  
CY325 CY325 None    K14R, E35D, M36I, R41K, H69K, V77I, L89M  
CY328 CY328 None    L10V, I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
CY329 CY329 None    I13IV, K14R, G16E, K20I, M36I, R41K, L63T, I64L, C67H, H69K, K70R, L89M, I93F I66M 
CY331 CY331 None    T12P, I15V, G16E, E35ED, M36I, P39PL, Q61E, I62V, L63N, I64V, C67Y  
CY332 CY332 None    I13V, N37T, R41K, A71V, I93L  
CY333 CY333 None    T12S, I15V, L19V, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
CY335 CY335 None    T4N, G17E, E35D, M36I, R57K, I62V, L63S, A71V, I93L  
CY336 CY336 None    G17E, E35D, M36I, R57K, I62V, L63S, A71V, I93L  
CY337 CY337 None    M36MI, N37T, R41K, R57K, A71V, I72IT, I93L  
CY338 CY338 None    L19I, M36I, N37D, L63AV, I64M, I72V  
CY339 CY339 None    T12TA, L19I, M36I, N37D, L63A, I64M, I72V  
CY340 CY340 None    E35N, M36I, N37D, R41K, L63T, H69K, I72IT, L89M  
CY341 CY341 None    G17E, E35D, M36I, R57K, I62V, L63S, A71V, I93L  
CY342 CY342 None    I13IV, N37T, R41K, R57K, A71V, I72IT, R87K, I93L  
CY343 CY343 None    I62V, L63H, V77I  
CY345 CY345 None    K14KR, G17GE, L19LQ, E35ED, M36I, N37NKT, R41RK, R57K, I62V, L63S, A71V, I72IT, I93L  
CY346 CY346 None    I15V, M36I, I62V, L63A, I93L  
CY347 CY347 None    I15V, M36L, I62V, L63A, I64L, I93L  
CY348 CY348 None  M46L, I54V, V82F K43T L10V, I15V, G16E, K20R, E35D, M36MIV, P39T, R41HN, G48E, R57K, I62V, L63T, E65D, I72T, T74A, L89M, I93L  
CY349 CY349 None    T12TI, I15V, G16GE, M36I, I62V, L63A  
CY350 CY350 None    E35D, M36I, K43KR, R57K, I62V, L63S, H69K, V82I, L89M  
CY351 CY351 None    I13V, E35D, M36I, N37D, L63P, H69K, A71V, I72V, V77I, L89M, I93L  
CY352 CY352 None    I13V, N37S, R41K, L63P, I72V  
CY353 CY353 None    I13V, E35D, M36I, N37D, R57K, L63P, I64L  
CY354 CY354 None    I62V, L63H, V77I, I93L  
CY355 CY355 None    L10I, I13V, K14KR, I15V, G16E, E35D, M36I, R57K, L63V, H69K, L89M  
CY356 CY356 None    E35D, M36I, R41K, R57K, A71V, I72IT, I93L  
CY357 CY357 None    I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89M  
CY359 CY359 None    L10I, I13V, K14KR, E35D, M36I, N37D, R41K, H69K, K70R, L89M  
CY362 CY362 None    I13V, E35D, M36I, N37D, R41K, R57RK, H69K, K70KR, L89M  
CY363 CY363 None    T12TK, I13IV, K14R, G16E, K20I, M36I, R41K, L63T, I64L, C67H, H69K, K70R, L89M, I93F I66M 
CY364 CY364 None    I15V, G16E, M36I, P39PS, I62V, L63A  
CY365 CY365 None    I13V, K14R, Q18H, R41K, D60E, Q61E, I62V, L63P, I64V, E65D, V77I  
CY367 CY367 None    L10V, E35D, N37P, R57K, I62V, L63P, I64L, A71T, I72V, V77VI P79E 
CY368 CY368 None    I62V, L63H, V77I  
CY369 CY369 None    L10I, I13V, L19I, E35D, M36I, R41K, K45R, R57K, D60E, L63T, C67Y, L89M  
CY370 CY370 None    I62V, L63H, V77I  
CY371 CY371 None    T12S, K14R, I15V, G16E, L19I, M36I, N37D, R41K, L63T, H69K, I93L  
CY372 CY372 None    I62V, L63H, V77I, I93L  
CY373 CY373 None    G16E, E35D, M36V, P39Q, R41K, K43R, I62V, L63A, C67CY, H69K, I72V, L89M  
CY374 CY374 None    I62V, L63H, V77I  
CY375 CY375 None    L10I, T12S, I13V, K14KR, I15V, G16E, E35D, M36I, R57K, L63V, C67CY, H69K, L89M  
CY376 CY376 None    T12N, E35D, L63S, I64V, I72V, V77I  
CY377 CY377 None    L10I, I13V, G16E, L19I, E35D, M36I, K45R, R57K, L63T, H69K, L89M K14D 
CY378 CY378 None    I13V, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CY379 CY379 None    L10I, I15IV, M36I, I62V, L63A, I64M  
CY380 CY380 None    T12P, K14T, L19T, K20R, E35D, M36I, R41K, R57K, I62V, L63V, E65N, T74S, L89M  
CY381 CY381 None    T12P, K14T, L19T, K20R, E35D, M36I, R41K, R57K, I62V, L63V, E65N, T74S, L89M  
CY382 CY382 None    G17E, E35D, M36I, R57K, I62V, L63S, A71V, I93L  
CY383 CY383 None   L33F N37T, R41K, R57K, A71V, I93L  
CY384 CY384 None    E35D, M36I, R41K, R57K, A71V, I93L  
CY385 CY385 None    I62V, L63H, V77I  
CY386 CY386 PI    L10V, I13V, K14R, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, K70R, L89M  
CY387 CY387 None    I13V, K14R, L19P, K20I, E35N, M36I, R41K, H69K, L89M  
CY388 CY388 None    R41RK, I62V, L63H, V77I, I93L  
CY389 CY389 None    L10I, I13V, K14R, G17E, K20I, E34K, M36I, N37K, P39E, Q61N, I62L, L63T, C67E, H69K, V77I, L89M  

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