Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Abecasis (2011)
Title Molecular epidemiological analysis of paired pol/env sequences from Portuguese HIV type 1 patients.
Citation AIDS Res Hum Retroviruses
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 153
NumPts 153
Subtype B, G, C, CRF02_AG, A, F, CRF45_cpx, D, CRF06_cpx

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 153 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
103344 103344 Unknown    I13V, K14R, I15IV, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
106629 106629 Unknown    T12S, I15V, L19V, N37S, L63PS, H69K, V77I, L89M, I93L  
107466 107466 Unknown  I54V, V82A, L90M L33F L10I, T12P, I13V, K20R, E35D, M36L, N37S, R41K, R57K, D60E, I62V, L63P, I66IV, A71T, V77I, I93L, C95F  
110928 110928 Unknown    T12AP, I13V, K14KR, N37S, R41K, K45R, L63P  
112860 112860 Unknown    T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
113181 113181 Unknown  M46I, I54V, V82A, L90M L10F, K43T, G73S, L89V T4S, V11I, I13V, G16A, L19P, K20I, A22V, E35D, M36I, N37E, R57K, I62V, L63P, A71I, I72R  
113620 113620 Unknown    M36I, I62V, L63P  
117741 117741 Unknown  M46I, I54V, V82F, I84V, L90M Q58E L10I, V11VI, K20R, E35D, M36I, N37D, R41K, K55R, R57RK, I62V, L63P, A71V, V77I, I93L  
119064 119064 Unknown    Q61H, L63AT, V77I  
120055 120055 Unknown  M46I, G48GA, I54V, L76V, V82T L24I, F53FL L10I, K20R, M36I, R41K, I62V, L63P, I64IMV, A71V, I93L  
120193 120193 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, D60E, H69K, K70R, L89M, I93L  
120491 120491 Unknown    I13V, Q18R, K20I, E35D, M36I, R41K, C67Y, H69K, V82I, L89M  
121108 121108 Unknown    I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M  
121456 121456 Unknown    E35D, N37E, I62IV, A71T, I72IV  
121862 121862 Unknown  I54V, V82A L24I L10I, E35D, N37D, K45R, R57RK, L63P, A71I, V77I  
122255 122255 Unknown    I13V, I15V, N37T, I64V  
123944 123944 Unknown   K20KT E35EDG, M36IL, R41K, R57K, D60E, I62V, L63P, V77I, I93L  
126629 126629 Unknown  D30N  T12S, I13V, I15V, L19I, K20R, E35D, M36I, R41K, K45Q, D60E, L63P, H69K, L89I, I93L Q18Y 
130268 130268 Unknown    I15V, N37K, R41N, H69K, V77I, L89M, I93L  
133331 133331 Unknown    I15V, K20R, E35D, M36I, N37E, R41K, H69K, L89M, I93L  
133552 133552 Unknown    K14R, M36T, N37S, R57K, L63P  
134241 134241 Unknown    T12S, L19I, M36I, R41K, D60E, Q61E, L63P, H69K, I72IMV, L89M, I93L  
134564 134564 Unknown    T12S, I15V, L19I, M36I, R41K, H69K, T74S, L89M, I93L  
135289 135289 Unknown  I54V, V82A  I13V, K20I, E35D, M36I, R41K, H69K, T74S, L89M  
135522 135522 Unknown    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
136647 136647 Unknown    I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, K70E, I72V, V82I, L89I  
138819 138819 Unknown    T12S, L19T, K20M, M36X, N37G, K43R, H69K, L89M, I93IL  
140501 140501 Unknown    L19T, M36I, R41K, L63LP, H69K, I72IM, I85V, I93L  
140692 140692 Unknown    K14R, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M, I93L  
149627 149627 Unknown    I15V, N37T, R41K, I62V, V77I, I93L  
149832 149832 Unknown  I54V, L90M F53FL L10I, I13V, K20IV, E35N, M36I, N37D, R41K, I62V, L63P, C67CY, H69K, A71I, T74S, V82I, L89I  
154356 154356 Unknown    T12PS, L19I, E35EG, M36I, N37S, R41K, L63AV, H69K, T74S, L89M, I93L  
154803 154803 Unknown  L90M K20T T12S, I15V, L19I, E35G, M36I, R41K, L63V, H69K, T74S, V82I, L89I, I93L  
156368 156368 Unknown    T12S, I15V, L19IV, K20R, M36I, R41K, H69K, K70KR, L89M, I93L K14DEV 
157916 157916 Unknown    I15IV, L19I, M36I, R41K, L63X, H69K, L89M, I93L  
159023 159023 Unknown  G48V, I54V, V82A, L90M F53L, G73C L10I, I13V, L19I, N37D, I62V, L63P, I64V, I72V, T74S, V77I  
159025 159025 Unknown    T12L, K14KR, L19T, N37T, R41K, I64V, H69HQ  
159639 159639 Unknown    I13V, K14R, G17E, K20I, M36I, R41K, I64M, H69K, K70R, L89M  
160009 160009 Unknown  I54V, I84V, L90M L10F, G73S I13V, I15V, K20R, E35D, M36I, R57K, D60E, I62V, L63P, A71V, V82VI  
160030 160030 Unknown    I13V, K14R, G16E, L19I, K20I, E35D, M36I, R41K, R57K, H69K, K70KR, L89M  
160250 160250 Unknown    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M  
161841 161841 Unknown  V82A L24M L10I, I13V, N37D, R41K, L63P, A71V, I93L  
162263 162263 Unknown  M46L, G48Q, I54V, V82A, L90M F53L, G73A, L89V T4S, T12E, I13A, K20I, E35D, M36I, I62V, L63P, H69K, K70EQ, T74S, T91S L33L_L 
163598 163598 Unknown    I13V, I15V, E35D, M36I, N37T, R41K, K45R, L63AT, K70Q, I72V, L89M  
163848 163848 Unknown    I15V, E35D, N37D, R57RK, I62IV, L63P, T74A  
64426 64426 Unknown  M46I, I84V, L90M N88D, L89LV V11VI, I13V, K14R, K20I, L33V, E34EQ, N37E, L63P, A71V, I72IT, I93L  
64542 64542 Unknown    I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, C67CG, H69K, V82VI, L89M  
67636 67636 Unknown    I13A, K14R, I15V, K20I, E35D, M36I, P39S, R41K, H69K, V82I, L89M  
71203 71203 Unknown    I15IV, M36I, N37S, L63P, H69K, I93L  
71389 71389 Unknown    K14N, K20R, M36I, N37K, R41K, Q61D, L63T, H69K, I93L  
80816 80816 Unknown  M46I, I54V, V82A, I84V L24I L10I, T12P, K14R, L63P, I64V, A71V, T74S, V77I, I93L  
81792 81792 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69X  
84022 84022 Unknown    Q18E, L63P, I72T, V77I, I93L  
93543 93543 Unknown  L90LM  L10I, D60DE, I62V, L63P, I64L, V77I, I93L  
93870 93870 Unknown    T12S, K14R, I15V, L19T, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L  
93886 93886 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
96616 96616 Unknown    T12S, I15V, L19T, M36V, N37E, K43R, H69K, L89M, I93L  
96949 96949 Unknown  V82A  L10V, T12AP, I15V, E35D, N37D, D60E, Q61E, I62V, L63P, I93L  
99067 99067 Unknown    I15V, N37T, R41K, I93L  
99302 99302 Unknown   L33F I13V, K14R, K20I, E35D, M36I, R41K, L63H, C67E, H69K, L89M  
BM11385 BM11385 Unknown  M46I, I54V, L76V, L90M  L10I, I13A, K14R, I15V, K20I, E35N, M36I, R41K, I62IV, H69K, V82I, L89I  
BM12088 BM12088 Unknown    T12S, I15V, L19I, K20R, E35D, M36I, R41K, D60E, H69K, K70KR, L89M, I93L  
BM12820 BM12820 Unknown    I13AV, K14R, K20I, L33LI, E34Q, M36I, P39S, R41RK, G68E, H69R, K70KR, L89IM  
BM15325 BM15325 Unknown  V32I, M46I, I54L, V82IT, I84V, L90M L33F, T74P L10I, V11I, I13V, N37D, Q61DE, L63P, C67N, A71V, V77I, I93L  
BM17297 BM17297 Unknown  M46L, I54V, V82A, L90M  L10I, R41K, L63P, H69HR, A71T, I72R, I93L, C95F  
BM18323 BM18323 Unknown  I54V, L90M K43T, F53L, G73T T12TK, I13V, K14KR, I15V, L19I, K20R, E35D, M36I, N37D, I62V, L63P, I64V, A71I, V82I, I93L  
BM18692 BM18692 Unknown    E35D, N37D, L63P, I93L  
BM19338 BM19338 Unknown  M46L, I54V, V82A, L90M  L10I, K20IV, E35DN, M36I, N37E, K55R, I62V, L63P, A71V, T74S, I85V, I93L  
BM19589 BM19589 Unknown  I54IV, L90M F53L L10I, K20I, M36L, N37D, R41K, I62V, L63P, I64V, T74S, I85V G73I 
BM19674 BM19674 Unknown    I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
BM19835 BM19835 Unknown    I13V, K14R, K20IR, M36I, N37E, R41RK, H69K, L89M  
BM20196 BM20196 Unknown    L10I, P39S, L63P, A71T, V77VI, I93L  
BM20902 BM20902 Unknown  D30N, I54L L10FY, K20T, N88D I13V, E35G, L63P, A71IV, I72V, T74S, V77I  
BM21617 BM21617 Unknown    L10V, K20R, M36I, N37S, R41K, H69K, L89M  
BM22010 BM22010 Unknown    I13V, K14KR, K20I, E35D, M36I, N37D, L63P  
BM22130 BM22130 Unknown  M46I, I50V, V82A, L90M L33F, F53L, T74P L10I, I13V, I15IV, K20R, E34Q, E35D, M36L, N37E, K55R, I62V, L63P, K70E, A71V, V77I  
BM22367 BM22367 Unknown  M46I, I54V, V82A, I84V L24I, K43T L10I, T12P, K14R, I15V, K20M, M36A, L63P, I64V, A71V, T74S, T91S, I93L  
BM22374 BM22374 Unknown  V32I, M46I, I47V, I54L, I84V L10F, K20T, K43KT I13V, I15V, M36I, L63V, I64V, T74S, P79S, L89LIM  
BM22473 BM22473 Unknown    L10I, I13V, K14R, K20I, E35D, M36I, R41K, R57K, L63LP, H69K, K70R, V82I, L89M, F99L  
BM22503 BM22503 Unknown  M46I, I54A, V82A L10F, L24I K20R, M36I, N37D, I62V, L63P, A71I, I93L  
BM22857 BM22857 Unknown  I84V N83D L10I, I15V, M36L, R41K, R57K, I62V, L63P, I85V  
BM22977 BM22977 Unknown    L19I, K20KR, M36MI, R41K, L63I, A71V, I72T, V77I, I93L  
BM22992 BM22992 Unknown  I54V  I13V, K20I, E35D, M36I, R41K, H69K, K70KR, V82I, L89M  
BM23009 BM23009 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, H69K, I72IT, V82I, L89M  
BM23061 BM23061 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, L63AP, H69K, L89M  
BM23298 BM23298 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
BM23301 BM23301 Unknown  M46I, I54V, V82A L24I, K43T, G73S L10I, K20R, E35D, M36I, N37D, K55R, R57K, Q61E, I62V, L63P, I66F, A71V, I72R  
BM23440 BM23440 Unknown    E35D, I62IV, L63P, V77I, I93L  
BM23472 BM23472 Unknown    L10I, M36L, N37D, I93L  
BM23599 BM23599 Unknown  M46I, I54V, V82T, I84V L33F, Q58E L10V, I13V, G16E, K20I, M36I, K55R, L63T, E65D, I72T, T74K, L89M  
BM23650 BM23650 Unknown    T12A, I15V, E35D, N37E, R57K, L63P, I93L  
BM23750 BM23750 Unknown    I15V, L19E, L63S  
BM23837 BM23837 Unknown    N37S, R41K, L63PST, V77I  
BM24074 BM24074 Unknown  I50IL L89MT I13V, K14R, L19Q, K20I, L33LI, E35N, M36I, R41K, K45KR, L63LP, H69K, K70R, A71AV, V82I  
BM24245 BM24245 Unknown    I13V, I15V, G17E, K20I, E35D, M36I, R41K, I72IV, V82I, L89M  
BM25032 BM25032 Unknown    E35D, N37S, R41K, D60DE, I62V, L63P, A71AT, I72IM, V77I, I93L  
BM25036 BM25036 Unknown  M46I, L90M  L10I, I13IV, K20M, E35D, M36I, L63P, I64V, Q92R, I93L, C95F  
BM25123 BM25123 Unknown  M46I, I54V, V82F, L90M L33F, Q58E L10I, I13V, E34D, N37H, I62V, L63P, V77I, I85V, L89M, I93L  
BM25175 BM25175 Unknown    I13V, K14R, K20I, M36I, N37D, R41K, H69K, V82I, L89M  
BM26897 BM26897 Unknown  M46MI  I13V, L19P, K20I, M36I, N37NS, R41K, H69K, K70KR, L89M  

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