Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Santos (2011)
Title Detection of distinct human immunodeficiency virus type 1 circulating recombinant forms in northeast Brazil.
Citation J Med Virol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 57
NumPts 57
Subtype B, F, CRF28_BF, CRF12_BF, CRF29_BF

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
BAS001 BAS001 Unknown Unknown  V108I, E138A K102R, L109V, D123E, K166R, D177E, T200A, R211K W88G, Q91E, I94N, P95A, H96K, P97D 
BAS003 BAS003 Unknown Unknown  E138A V60I, R83K, V118I, D123E, I135T, T139V, S162C, T200A, R211K, F214C  
BAS008 BAS008 Unknown Unknown   E53D, I135T, D177E, R211K  
BAS011 BAS011 Unknown Unknown  K103N K20R, V35I, I47N, W88R, D123E, W153R, S162N, R211K  
BAS015 BAS015 Unknown Unknown D67N, K70R, M184V  V35I, I135T, I142T, Q197K, T200A, I202V, E203K  
BAS016 BAS016 Unknown Unknown   K32R, S48T, I63L, E194Q, T200I, H208L, R211K  
BAS018 BAS018 Unknown Unknown   K11R, K49R, R83K, D123E, I135T, S162C, I178L, G196E  
BAS023 BAS023 Unknown Unknown   E28K, V60I, R83K, K122E, D123E, S162Y, K173T, D177E, D186N, T200A  
BAS024 BAS024 Unknown Unknown  E138A V60I, R83K, G93R, I135T, T139V, S162Y, V179I, T200I, R211K N81K, R206G 
BAS025 BAS025 Unknown Unknown   V35E, K102R, I135R, I178L, F214L, T215P K70I, R206G 
BAS026 BAS026 Unknown Unknown   V21I, V35T, T39A, E40D, K49R, G93R, G112E, R143K, S162C, E169D, K173A, Q174K, Q207E, R211K, F214L  
BAS027 BAS027 Unknown Unknown  E138A V60I, R83K, V118I, D123E, I135T, T139V, S162Y, V179I, Q197E, T200I, R211K  
BAS028 BAS028 Unknown Unknown  V108I D123N, D177E  
BAS029 BAS029 Unknown Unknown   R83K, D123E, N147H, S162A, D177E, T200A, E203D, Q207K, R211K  
BAS033 BAS033 Unknown Unknown   G45E, Q207E, K220N, H221Q  
BAS036 BAS036 Unknown Unknown   V35I, K104R, D123E, G155R, S162C, L193F, T200A, Q207E, R211K F171S 
BAS041 BAS041 Unknown Unknown   D76N, R172K, D192N, E194P, E204R, R211K  
BAS042 BAS042 Unknown Unknown   K122A, S162C, D177E, I178M, V179I, E194Q, T200A, Q207P I63M, K64G, H208P 
BAS044 BAS044 Unknown Unknown   A98S, D177E, T200A, I202V, R211K K64E, W71C 
BAS045 BAS045 Unknown Unknown T215L V106I V21I, V35T, T39K, K122E, I135V, S162C, E169D, K173T, Q174K, Q207A, L210E, R211K T216S 
BAS046 BAS046 Unknown Unknown   V35T, T39M, V60I, R83K, Q207E V111A, T128A 
BAS048 BAS048 Unknown Unknown M184V  D123E, G196R, E203K, Q207K, R211K, F214L Y127H, D185E, D192V, H198L 
BAS053 BAS053 Unknown Unknown M184V  V35I, K49R, R83K, V90I, A158S, T200A, R211K  
BAS055 BAS055 Unknown Unknown D67N  A98S, E203G  
BAS058 BAS058 Unknown Unknown  V106I K122E, I135T, S162N, D177E, G196E, F214L  
BAS061 BAS061 Unknown Unknown   I135T, F171Y, Q197E, I202V, Q207N, R211K  
BAS062 BAS062 Unknown Unknown   R83K, D123E, I135V, T200I, Q207K  
BAS065 BAS065 Unknown Unknown M41L, D67N, L210W, T215Y, K219N Y181C K20R, E44D, K104E, G112E, V118I, K122E, I135T, G196E, H208Y, F214I A98P, G99S, V111M, T139P 
BAS066 BAS066 Unknown Unknown   K49R, I135T, S162C, D177E, T200A, R211K  
BAS069 BAS069 Unknown Unknown K70R, M184V L100I E6D, K102E, K103E, P119S, D123N, I135L, S162A, R211K V8F, K122G 
BAS070 BAS070 Unknown Unknown   D123E, I135R, I202V  
BAS075 BAS075 Unknown Unknown  K103N V35T, K122E, D123E  
BAS079 BAS079 Unknown Unknown   R83K, I135T, S162A, R211K  
BAS081 BAS081 Unknown Unknown   V35T, V90I, D123E, P176Q, I202V, R211K  
BAS084 BAS084 Unknown Unknown   E42K, S68G, K122E, I135T, K166R, T200I, T216P, D218N  
BAS085 BAS085 Unknown Unknown   R211K  
BAS086 BAS086 Unknown Unknown   S68G, V90I, D121H, K122E, I135T, S162D, D177E, G196E  
BAS087 BAS087 Unknown Unknown M41L, D67G, L210W, T215Y L100I, K103N A33G, T39A, V75L, V118I, K122E, D123N, I135T, S162D, I178L, T200A, I202V, R211K, F214I D76G 
BAS092 BAS092 Unknown Unknown   D123E, K173Q, Q174K, I180V, Q207K, R211K  
BAS094 BAS094 Unknown Unknown   T200V, Q207E  
BAS095 BAS095 Unknown Unknown M41L, M184V, T215Y K103S, G190A K11N, K122P, I135T, D177E, V179I, V189I, T200I  
BAS096 BAS096 Unknown Unknown   V35T, K122E, I135T, I142V, E169D, K173T, Q174R, Q207E, R211K F214T 
BAS102 BAS102 Unknown Unknown M41L, M184V, T215Y Y188L V60I, I135T, V179I, T200E, I202V  
BAS105 BAS105 Unknown Unknown  V179D V35T, R83K, G196R, E204K, Q207R, R211K D192V, E194H, R206E 
BAS111 BAS111 Unknown Unknown D67N, K70R, T215F, K219Q Y188L V60I, T69N, I135V, S162C, D177E, T200Q, E203D  
BAS112 BAS112 Unknown Unknown   A98S, I135T C38W, R72E 
BAS113 BAS113 Unknown Unknown K65E Y181C, H221Y E6G, R83K, D123E, S162Y, D177E, I178L, V179I, E194D K73H 
BAS114 BAS114 Unknown Unknown A62V  T69A, D123E, A158S, E194A, E203K, R211K D185G, R206G 
BAS115 BAS115 Unknown Unknown   I135T, E204K, R211K  
BAS120 BAS120 Unknown Unknown   K49R, V60I, D123E, I135T, I142V, D177E, R211K  
BAS132 BAS132 Unknown Unknown   K122E, I135T, S162C  
BAS134 BAS134 Unknown Unknown M41L, D67N, K70R, M184V, L210W, T215Y, K219N  E40D, E42K, E44D, E53G, V118I, K122E, I142V, R211K G51A, W212S, F214D 
BAS136 BAS136 Unknown Unknown   K122E, T200A, F214L  
BAS141 BAS141 Unknown Unknown M41L, M184V, L210W  K20R, K122E, D123N, K173T, R211K  
BAS147 BAS147 Unknown Unknown   K122E, I135T  
BAS304 BAS304 Unknown Unknown   R83K, D123E  
BAS378 BAS378 Unknown Unknown   K49R, D121H, K122E, I135T, S162N, I178M, I202V, R211K  

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