Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Pei (2019)
Title Multiple HIV-1 Subtypes Were Found Circulating in Suqian District of Jiangsu Province, China.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 84
NumPts 84
Subtype CRF01_AE, CRF07_BC, CRF08_BC, CRF67_01B, B

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
2018SQ100 2018SQ100 Unknown Unknown   D123DE, I135V, S162C, I178IM, T200A, E204EK, A272P, K277R, Q278E, E297EK  
2018SQ101 2018SQ101 Unknown Unknown   E6D, K20KR, V35IT, T39K, K102R, K122E, D123S, K173I, Q174K, D177E, Q207A, R211S, F214L, V245E, V276I, T286AP, E291D, V292I, I293V, T296S  
2018SQ102 2018SQ102 Unknown Unknown   P1PS, V35T, T39D, S48T, I50IT, V60I, D121H, K122E, I135T, I142T, V245Q, A272P, K277KR, V292I, I293V  
2018SQ103 2018SQ103 Unknown Unknown M184I E138K, M230I E6D, V35T, T39K, M41I, K43E, G45R, G51R, W71*, E79K, W88*, K122E, D123S, R125K, W153*, G155R, K173I, Q174K, D177E, G190R, G196R, Q207A, R211S, W212*, K238R, I244V, V245E, G262R, W266*, A272P, G285E, T286A, E291D, V292I, I293V, E297G G18R, G99S, G112R, G141K, D185N, G213R, G231R, G273K 
2018SQ106 2018SQ106 Unknown Unknown   E6D, V8I, K11A, V35T, T39K, K103R, K122E, D123S, S162C, Q174N, D177E, V179I, T200I, E203K, Q207A, R211S, K238R, V245E, A272P, K275R, K277R, T286A, E291D, V292I, I293V  
2018SQ107 2018SQ107 Unknown Unknown   E6D, K11T, V35T, T39R, K43E, V60I, S68G, K122E, D123S, I135R, Q174N, D177E, V179I, T200I, Q207A, R211S, V245E, K277R, T286A, E291D, V292I, I293V  
2018SQ115 2018SQ115 Unknown Unknown   E6D, V35T, K122E, D123S, K166R, T200I, F214L, K238R, V245E, A272P, V276I, I293V  
2018SQ121 2018SQ121 Unknown Unknown  V106I I5V, E6D, K11T, V35T, T39K, K43E, I50V, V60I, S68G, K122E, D123N, D177E, I178M, V179I, T200K, Q207A, R211S  
2018SQ123 2018SQ123 Unknown Unknown M184I  E6D, K11T, V35T, T39K, K43E, V60I, D121H, K122E, D123S, R125K, I135T, K173R, Q174K, D177E, G196R, T200I, Q207A, R211S, F214L  
2018SQ124 2018SQ124 Unknown Unknown   E6D, V35T, K122E, D123N, T165I, T200I, E203EK, R211K, F214FL, K238R, V245E, A272P  
2018SQ129 2018SQ129 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, K104R, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200I, Q207A, R211S  
2018SQ130 2018SQ130 Unknown Unknown   P9S, K20R, V35T, T39D, S48T, E53D, V60I, K122E, I135V, S162C, Q207E  
2018SQ133 2018SQ133 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, K122E, D123N, S162C, D177E, Q207A, R211S, K238R, V245E  
2018SQ134 2018SQ134 Unknown Unknown   V35T, T39K, K122E, D123S, S162C, K173T, Q174K, D177E, V179I, Q207S, R211S, K238R, V245E, K275Q, T286A, E291D, V292I, I293V  
2018SQ135 2018SQ135 Unknown Unknown   P4PT, E6D, V8VI, V35T, E36EA, T39KR, K43E, K46KR, S105A, K122E, D123S, K173R, Q174K, D177E, T200V, Q207A, R211S, K238R, V245E, T286A, I293IV  
2018SQ138 2018SQ138 Unknown Unknown   E6N, K11T, V35K, T39K, K43E, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, Q207T, R211S, K238R  
2018SQ14 2018SQ14 Unknown Unknown M41L, K65R, D67N, K219E V106M, V179D, F227L V35T, T39N, V60I, S68R, D121Y, K122E, Q197K, T200A, R211Q, V245Q, A272P, K277R, V292I, I293V  
2018SQ140 2018SQ140 Unknown Unknown   E6D, V35T, T39K, E40EG, K43E, K64R, K122E, D123S, I135T, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, V245E, T286A, E291D, V292I, I293V Q269QR 
2018SQ141 2018SQ141 Unknown Unknown K219KE Y181YC E6D, K11T, K20R, E28EA, V35T, T39K, E40EK, K43E, K49R, K122E, D123S, I135IT, T139A, S162C, E169D, D177E, Q207A, R211S, K238R, V245E, V276I, L283I, T286A, E291D, I293V P52PS 
2018SQ145 2018SQ145 Unknown Unknown   P4PS, V35T, E36A, T39DE, E53D, V60I, R72RK, D76DN, R83RK, D86DN, K103KR, T107TS, I135V, S162CW, E169D, V179VI, T200A, Q207E, R211K, V245Q, A272P, K277KR, T286A, V292I W71WG 
2018SQ147 2018SQ147 Unknown Unknown M184I E138K, M230I E6D, K11T, V35T, T39K, E40K, K43A, D76N, D121N, D123N, S162C, K173R, Q174K, D177E, V179I, G190R, G196E, E203D, Q207A, R211N  
2018SQ149 2018SQ149 Unknown Unknown   E6D, K20R, K32KR, V35T, T39K, K43E, K122E, D123N, S162C, K173R, Q174K, D177E, I178M, I195L, Q207A, R211S, K238R, V245E, T286A, I293V, P294S, E297A  
2018SQ150 2018SQ150 Unknown Unknown   E36K, I135L, S162C, T200A, R211G, Q278E, I293V P226PL 
2018SQ157 2018SQ157 Unknown Unknown   E6D, K11T, V35T, T39K, K43A, S48T, V60I, K122E, D123S, S162C, K173R, Q174K, D177E, V179T, T200I, Q207A, R211S  
2018SQ162 2018SQ162 Unknown Unknown   V35M, T39N, S48T, V60I, R83RK, D121H, K122E, Q207E, V245K, A272P, K277R, T286A, V292L, I293L D186DG, H208HR 
2018SQ164 2018SQ164 Unknown Unknown K70KQ H221HY E6D, K11T, K32I, V35T, T39K, K43E, K122E, D123S, K166KR, K173I, Q174K, D177E, T200EK, Q207A, R211S, V245D  
2018SQ165 2018SQ165 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173L, Q174K, D177E, T200E, Q207A, R211S, V245D  
2018SQ167 2018SQ167 Unknown Unknown   E6D, I135V, S162C, T200A, R211K, A272S, V276I, K277R, Q278E, V292L, I293L I94IT, C280CR 
2018SQ169 2018SQ169 Unknown Unknown   E6N, K11A, V35T, T39K, K43E, G45GR, S48SL, V60I, K122E, D123S, I142V, K173IR, Q174K, D177E, T200I, Q207A, R211S, V245E, T286A, E291D, V292I  
2018SQ170 2018SQ170 Unknown Unknown   E6D, V35T, T39R, K43E, K122E, D123S, S162C, K173A, Q174K, D177E, I178L, E203D, Q207A, R211S, K238R, V245E, K275R, T286A D121DG, Y232YC 
2018SQ173 2018SQ173 Unknown Unknown   E28K, K32E, V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135T, F214L, V245Q, E248V, K249Q, A272P, V276I, K277R, E291D, V292I, I293V  
2018SQ179 2018SQ179 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, S48T, K49R, V60I, K102R, D121DY, K122E, S134SN, I135IT, K173R, Q197K, K238R, V245Q, E248V, K249Q, A272P, G273R, K275R, T286A, E291D, V292I, I293V  
2018SQ180 2018SQ180 Unknown Unknown   V8I, E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121H, K122E, R211G, V245Q, E248V, K249Q, A272P, K277R, E291D, V292I, I293V  
2018SQ184 2018SQ184 Unknown Unknown   V35M, T39N, S48T, V60I, R211T, V245Q, A272P, K277R, T286A, A288S, I293V, E297A  
2018SQ185 2018SQ185 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, F171Y, K173R, Q174K, D177E, I178M, T200TA, E203D, Q207N, R211S, K238R, V245E, T286A, E291D, V292I, I293V P133H 
2018SQ186 2018SQ186 Unknown Unknown   E6D, V35T, K122E, D123S, K166R, T200I, F214L, V245E, A272P, I293V  
2018SQ188 2018SQ188 Unknown Unknown   E6ED, V35T, T39TA, K122E, D123S, K166KR, T200I, R211K, F214FL, K238R, V245K  
2018SQ189 2018SQ189 Unknown Unknown   E6D, K11T, V35T, T39R, K43E, K102R, K122E, D123S, S162C, D177E, E203D, Q207A, R211S, K238R, V245E, K275R, V276I, T286A, E291D, I293V  
2018SQ191 2018SQ191 Unknown Unknown   E6D, K11T, K20KR, V35T, T39R, K43E, V60I, V118I, K122E, D123S, I135T, K173R, Q174K, D177E, T200R, E203D, Q207A, R211S, F214L, K238R, V245DE, K281KR, T286A, E291D, V292I, I293V  
2018SQ192 2018SQ192 Unknown Unknown   E6D, V35T, T39K, K43E, K122E, D123S, I135T, S162C, Q174R, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, A272P, K275R, V276VI, T286A, E291D, V292I, I293V, P294Q  
2018SQ193 2018SQ193 Unknown Unknown D67DN  E6D, K11T, V35T, T39KR, K43E, K49R, K122E, D123S, I135T, S162C, E169D, D177E, I178M, T200TA, E203D, Q207A, R211RS, K238R, V245E, V276I, T286A, I293V  
2018SQ195 2018SQ195 Unknown Unknown   E6D, K11T, V35T, T39R, K43E, D123N, S162C, I167IF, F171Y, K173T, Q174EK, D177E, T200A, E203D, Q207A, R211S, K238R, I244V, V245E, E291D, I293V  
2018SQ21 2018SQ21 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, K43R, S48T, V60I, D121Y, K122E, D177G, H208Y, R211K, V245Q, E248V, K249Q, A272P, K277R, T286V, V292I, I293V  
2018SQ25 2018SQ25 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, K43R, S48T, K49KR, V60I, D121Y, K122E, I135T, I142T, D177G, H208Y, R211K, V245Q, E248V, K249Q, S251SN, A272P, V276IT, T286A, V292IM, I293V  
2018SQ3 2018SQ3 Unknown Unknown M184I M230I E6D, V8I, K11T, M16I, E29K, V35T, T39K, M41I, G45R, G51R, W71*, E79K, W88*, V111I, G112*, D123S, I135T, W153*, K173L, Q174K, D177E, D192N, G196R, T200I, Q207A, R211S, W212*, F214L, W229*, K238R, W239*, V245E, V276I, L283I, T286A, E291D, V292I, I293V G18R, C38Y, G152E, G213R, G231R, G262K 
2018SQ32 2018SQ32 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, K43R, S48T, V60I, K122E, I135V, I142T, K166R, R211K, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V Q145QR 
2018SQ34 2018SQ34 Unknown Unknown   E6D, K11KR, V35T, T39X, K43KE, I50IV, D121H, K122E, D123DE, K126KQ, S162C, D177DE, V179I, V189I, Q207A, L210LF, R211S, K238R, V245E, T286A, I293V, E297EK D76DE 
2018SQ35 2018SQ35 Unknown Unknown  V106I E6ED, K11KRT, K20R, V35T, T39N, S48T, E53D, V60I, K122E, D123S, S162C, I178L, G196E, T200TA, Q207E, V245Q, A272P, E291D, V292I, I293V  
2018SQ38 2018SQ38 Unknown Unknown M184MV  E28K, K32E, V35T, E36A, T39D, K43R, S48T, V60I, E89EK, D121Y, K122E, G141GR, R211K, F214L  
2018SQ39 2018SQ39 Unknown Unknown D67N, K70R, M184V, T215F, K219Q V106M, Y181V, H221Y, F227L E6D, V35T, T39R, K43A, I94L, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, T200A, I202V, E203D, Q207A, R211S, K238R, V245E, T286A, A288T, I293V  
2018SQ40 2018SQ40 Unknown Unknown M184I  E28K, K32E, V35T, E36A, T39D, S48T, G51R, V60I, W88*, G112E, K122E, G141R, D177G, Q207E, W212*, W229*, V245Q, E248V, K249Q, G262E, W266*, A272P, G273R, K277R, R284K, T286A, E291D, V292I, I293V G152R, G231R 
2018SQ41 2018SQ41 Unknown Unknown K65KR, M184MI K103KN, V179E, Y181YC E6D, K20KR, T27TA, V35T, T39K, K43AE, S68SG, K122E, D123S, I135T, S162C, S163ST, R172RK, Q174R, D177E, I178M, T200TA, Q207A, R211S, K238R, V245E, A272P, K275R, V276VI, K281KR, L283LI, E291D, V292I, I293V  
2018SQ43 2018SQ43 Unknown Unknown A62AV, V75VI A98AG E6D, V35I, K103KR, K122E, D123S, I142V, T200I, I202V, R211K, K238R, V245E, A272P, V292VI, I293V  
2018SQ44 2018SQ44 Unknown Unknown   V21I, I135V, K173E, Q174K, N175NH, T200A, I202V, R206RK, Q207K, R211G, G262GE, A272AP, K277KR, Q278EK, I293V  
2018SQ46 2018SQ46 Unknown Unknown   E6D, V35IT, E36D, T39TK, K64KR, K122E, D123S, I135T, T139A, S162C, K173R, Q174K, D177E, I178M, G196E, E203D, Q207T, R211S, K238R, V245E, A272S, K281KR, T286A, V292I, I293V  
2018SQ48 2018SQ48 Unknown Unknown   E6D, K11A, V35T, T39K, K43E, D121H, K122E, D123S, K173I, Q174K, D177E, I180V, G196E, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V  
2018SQ49 2018SQ49 Unknown Unknown  V179D E6D, V35T, T39K, K43EQ, K122E, D123S, I135T, S162C, Q174R, D177E, I178M, Q207A, R211S, K238R, V245E, A272P, K275R, V276I, L283LI, E291D, V292I, I293V  
2018SQ50 2018SQ50 Unknown Unknown   E6D, K11T, V35T, T39R, K43E, K122E, D123S, S162C, D177E, I178M, G196S, T200TA, E204K, Q207A, R211S, K238KR, V245E, K275R, Q278H, T286A, E291D, I293V I244IR 
2018SQ51 2018SQ51 Unknown Unknown   V35VM, S162C, T200A, A272S, Q278E  
2018SQ52 2018SQ52 Unknown Unknown   E6D, K11T, V21VI, V35T, T39TK, V60VI, K122E, D123NS, S162C, K173I, Q174K, D177E, I178M, T200TI, Q207N, R211S, K238R, V245EK, A272P, T286V, I293V  
2018SQ53 2018SQ53 Unknown Unknown   V35T, E36EA, T39E, S48T, E53D, V60I, T69S, D123DE, I135L, S162C, Q207QK, R211K, V245Q, A272P, K277KR, L283LI, E291ED, V292I, I293V  
2018SQ54 2018SQ54 Unknown Unknown   E6ED, V35T, T39E, S48T, E53D, V60I, T69S, D123DE, I135L, S162C, Q207E, R211K, V245Q, E248EV, A272P, K277R, V292I, I293V, E297EA  
2018SQ55 2018SQ55 Unknown Unknown A62V, K65R, M184I V179D, Y181C T27S, V35K, T39D, S48T, E53D, V60I, K103R, S162C, T200A, I202V, Q207E, R211K, V245Q, A272P, L282V, T286A, E291D, V292I, I293V  
2018SQ56 2018SQ56 Unknown Unknown M184MV K103KN V35T, T39K, K43E, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, T200TI, Q207A, R211S, K238R, V245E, E248EK, T286A, E291D, V292I, I293V, E298EK, E300EK  
2018SQ60 2018SQ60 Unknown Unknown   E6D, V8VI, K20KR, E28K, K32E, V35T, E36A, T39D, E42EK, S48T, E53D, V60I, T69S, E89EK, T200TA, I202IV, Q207QEK, R211K, V245Q, A272P, V276T, K277R, E291D, V292I, I293V, E297ED  
2018SQ65 2018SQ65 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, E169ED, V179VI, V245Q, E248IV, K249Q, A272P, K277R, T286A, E291D, V292I, I293V  
2018SQ68 2018SQ68 Unknown Unknown   E6D, K11S, K32N, V35I, T39K, K43A, S68G, K102X, K122E, D123NS, I135R, S162C, K173GR, Q174K, D177E, V179IT, T200I, Q207A, R211S, K238R, V245E, A272P, K275R, T286A, E291D, V292I, I293V  
2018SQ69 2018SQ69 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, K43R, S48T, V60I, D121Y, K122E, I135T, R211K, D237E, V245Q, K249Q, A272P, K277R, T286V, E291D, V292I, I293V  
2018SQ70 2018SQ70 Unknown Unknown   E6ED, E28K, K32KE, V35T, E36A, T39D, K43KR, S48T, V60I, D121Y, K122E, I135IT, R211K, D237DE, V245Q, K249KQ, A272P, K277KR, T286AV, E291D, V292I, I293V  
2018SQ71 2018SQ71 Unknown Unknown A62AV, M184MI Y181YC E6ED, T27TS, E28EK, K32KE, V35T, E36EA, T39X, K43KR, S48T, E53ED, V60I, T69TS, R83RG, V90VI, K103KR, D121DHY, K122KE, D123X, I135X, S162SC, T200TA, I202IV, Q207QE, R211RK, K238KR, V245Q, A272P, K277KR, L282LV, T286AV, E291ED, V292I, I293V  
2018SQ72 2018SQ72 Unknown Unknown   V35T, T39N, G45GE, S48T, E53D, V60I, V90I, D121HY, K122E, I135V, S162C, Q207E, R211K, V245Q, A272P, K277R, L282V, T286A, V292I, I293V E28E* 
2018SQ73 2018SQ73 Unknown Unknown K65R G190E E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173R, Q174K, D177E, V179I, Q207A, R211S, V245E, A272P, K275R, T286A, A288G, E291D, V292I, I293V, E298EK, E300EK  
2018SQ74 2018SQ74 Unknown Unknown   E6D, K11T, V35T, E36EG, T39K, K43E, K122KE, D123N, S162C, K173R, Q174K, D177E, V179I, T200A, Q207A, R211S, K238R, V245E, S251N, A272P, K275R, V276I, T286A, E291D, V292I  
2018SQ76 2018SQ76 Unknown Unknown   V35T, E36A, T39D, S48T, E53D, V60I, D192N, I202V, Q207E, R211K, V245Q, A272P, K277R, V292I, I293V, E297A  
2018SQ77 2018SQ77 Unknown Unknown   E6D, V35T, E36A, T39K, K43Q, S162C, K173R, Q174K, D177E, I178M, V179I, I195L, G196E, Q207A, L210M, R211S, K238R, V245E, T286A, A288S, I293V, E297T  
2018SQ79 2018SQ79 Unknown Unknown   K11T, E28K, K32E, V35T, E36A, T39D, S48T, E53G, V60I, D121Y, K122E, I135T, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V  
2018SQ83 2018SQ83 Unknown Unknown   V35T, E36A, T39E, S48T, E53D, V60I, T69S, I135L, S162C, Q207K, R211K, V245Q, A272P, K277R, E291D, V292I, I293V  
2018SQ84 2018SQ84 Unknown Unknown   E6D, V35T, T39K, K43E, K49R, S105A, K122E, D123S, K173R, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, K281R, T286A, I293V, P294S, E297A  
2018SQ86 2018SQ86 Unknown Unknown   E6D, V35T, K122E, D123S, K166R, T200I, Q207H, R211K, K238R, V245EK, A272P, I293V  
2018SQ87 2018SQ87 Unknown Unknown   E6D, V8I, V35T, T39K, K43E, K122E, D123S, I135T, K173I, Q174K, D177E, T200L, Q207A, R211S, V245EK, E248X, K249X, D250X, S251X, W252X, T253X, V254X, N255X, V276I, L283I, T290TP, E291D, V292IM, I293V, P294Q  
2018SQ93 2018SQ93 Unknown Unknown   E6D, K20KR, V35T, E40EK, E42EK, G45GE, R72RK, K122E, D123S, I135IM, K166KR, T200I, E203EK, H208HY, R211K, K238R, V245K, G262GE, A272P, I293V V261VM 
2018SQ97 2018SQ97 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121H, K122E, V245Q, E248V, K249Q, A272P, K277R, E291D, V292I, I293V  
2018SQ98 2018SQ98 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, K43KR, S48T, V60I, D121HY, K122E, D177DG, R211RK, I244IV, V245Q, E248V, K249Q, A272P, K277R, T286TA, E291D, V292I, I293V  
2018SQ99 2018SQ99 Unknown Unknown   E28K, K32E, V35T, E36A, T39D, K43R, S48T, V60I, D121Y, K122E, D177G, R211K, I244V, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V