Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Negi (2017)
Title Genotypic Characterization of Human Immunodeficiency Virus Type 1 Derived from Antiretroviral Drug-Treated Individuals Residing in Earthquake-Affected Areas in Nepal.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 29
NumPts 29
Subtype C, CRF01_AE, CRF82_cpx, CRF62_BC, CRF08_BC

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
NP_1 NP_1 Unknown    T12K, K14R, I15V, G16E, M36V, R41K, L63S, H69K, L89M, I93L  
NP_12 NP_12 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, K70R, T74S, L89M, I93L  
NP_13 NP_13 Unknown    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
NP_15 NP_15 Unknown    L19I, M36L, R41K, K45R, L63P, H69K, K70R, I93L E35E_TS 
NP_16 NP_16 Unknown    T12S, I15V, L19V, M36V, R41K, L63P, H69K, I93L  
NP_18 NP_18 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M  
NP_2 NP_2 Unknown    T12S, L19I, M36I, R41K, Q61H, L63P, H69K, I93L  
NP_20 NP_20 Unknown    T12S, K14R, I15V, L19I, M36I, R41K, L63A, H69K, V82I, I93L  
NP_22 NP_22 Unknown    T12S, I13V, I15V, G16E, L19I, K20R, E35D, M36I, R41K, Q61E, L63H, H69K, L89M, I93L  
NP_23 NP_23 Unknown    I13V, K20R, L33I, M36I, N37S, R41K, I62V, L63T, I64M, H69K, K70R, A71V, I72V, L89M, I93L  
NP_24 NP_24 Unknown    T12S, I15V, L19I, M36I, R41K, L63P, H69K, K70R, I93L  
NP_26 NP_26 Unknown    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
NP_27 NP_27 Unknown    T12S, I15V, L19I, M36I, R41K, L63P, I64L, H69K, K70R, I93L  
NP_28 NP_28 Unknown    T12S, L19I, N37S, L63P, H69K, L89M, I93L  
NP_29 NP_29 Unknown    T12S, K14R, I15V, L19I, K20R, M36V, N37D, R41K, L63P, H69K, L89M, I93L  
NP_3 NP_3 Unknown    T12S, I15L, G16R, G17D, L19I, K20R, M36V, R41K, Q61H, L63P, H69K, V75I, I93L G52S, G94R 
NP_30 NP_30 Unknown    T12P, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
NP_31 NP_31 Unknown  I50V  I13V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, H69K, L89M  
NP_33 NP_33 Unknown    T12S, K14R, L19I, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
NP_34 NP_34 Unknown    I15V, M36I, R41K, L63P, H69K, K70R, I93L  
NP_35 NP_35 Unknown    T12S, I15V, L19I, M36I, L63P, H69K, I93L  
NP_37 NP_37 Unknown    T12S, I15V, L19T, M36I, R41K, L63P, H69K, I93L  
NP_38 NP_38 Unknown    I15V, L19T, M36I, R41K, L63P, H69K, I93L  
NP_4 NP_4 Unknown    T12P, G16E, L19I, E35D, L63S, H69K, I93L  
NP_40 NP_40 Unknown    T12S, I13V, K14R, I15V, L19V, M36I, R41K, L63P, H69K, L89M, I93L  
NP_5 NP_5 Unknown    T12S, L19I, N37S, L63P, H69K, L89M, I93L  
NP_6 NP_6 Unknown    T12S, I15V, L19I, M36I, R41K, L63P, H69K, K70R, T74A, L89M, I93L  
NP_8 NP_8 Unknown    K14R, I15V, L19I, M36L, R41K, I62V, L63S, H69K, A71T, I72E, I93L  
NP_9 NP_9 Unknown    T12S, K14R, L19I, M36V, R41K, L63S, H69K, L89M, I93L  

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