Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Hamilton (2012)
Title Analysis of protease and reverse transcriptase genes of HIV for antiretroviral drug resistance in Jamaican adults.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 102
NumPts 102
Subtype B

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 102 Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
AA7009TR-01 AA7009TR-01 Unknown Unknown   V35T, D123E, S162A, D177E, T200A, E204Q, R211K  
AA700B8T-01 AA700B8T-01 Unknown Unknown   K64N, K122E, D177E, Q207E, R211K, P243T, V245N I178T 
AA700B9W-01 AA700B9W-01 RTI RTI  A98G V60I, R83K, D123E, I135T, S162A, D177E, T200A, E203D, R211K  
AA700BKV-01 AA700BKV-01 Unknown Unknown   D123E, F171Y, K173E, Q174R, D177E, G196E, Q207E, R211K  
AA700BOR-01 AA700BOR-01 RTI RTI  Y188L K49R, T69N, K122Q, I135T, S162W, V179I, I180V, T200A, E204Q, Q207E, R211K, E248D  
AA700BQ8-01 AA700BQ8-01 Unknown Unknown   V21VI, V60I, K173E, Q174X, T200E  
AA700BR7-01 AA700BR7-01 Unknown Unknown   K49R, K122E, D123X, S162C, G196E, E204Q, Q207A, R211K  
AA700BS3-01 AA700BS3-01 None None  V179E K32I, K102R, K122E, D123N, S162C, R211T  
AA700BSW-01 AA700BSW-01 None None   R83K, V90I, D123E, I135T, S162A, I180V  
AA700C05-01 AA700C05-01 Unknown Unknown   I135V, S162C, K173E, Q174R, Q207V, R211K  
BA7009W8-01 BA7009W8-01 Unknown Unknown   I135T, S162A, F171Y, Q174A, R211K  
BA7009XN-01 BA7009XN-01 Unknown Unknown   K122E, D123G, D177E, I178M, R211K, V245M, E248D  
BA700B66-01 BA700B66-01 Unknown Unknown   V35I, I178M, V245K  
BA700BF6-01 BA700BF6-01 Unknown Unknown   D123E, S162A, D177E, I178M, Q207A, R211K  
BA700BL5-01 BA700BL5-01 Unknown Unknown   V35VI, S162C, I178M, G196E, E204Q, Q207A, R211K, F214FL  
BA700BZ6-01 BA700BZ6-01 Unknown Unknown   D121H, I178L  
BA700BZP-01 BA700BZP-01 None None  V106I A98S, K122E, D177E, Q207E  
BA700C0N-01 BA700C0N-01 Unknown Unknown   K22KR, V35M, K122KE, I135V, S162C, T200A, Q207AE, R211K  
BA700C37-01 BA700C37-01 Unknown Unknown  Y188L K20R, V35I, T69TA, K122E, R172RK, I178L, F214L  
CA7009VN-01 CA7009VN-01 Unknown Unknown   K20R, I135T, S162A, R211K, S251Q  
CA700B40-01 CA700B40-01 Unknown Unknown   V35I, S48T, D123E, Q174K, D177E, T200A, R211K, E233D  
CA700BLB-01 CA700BLB-01 Unknown Unknown   V35I, E40D, R83K, S162Y, K173Q, I178L, R211K  
CA700C00-01 CA700C00-01 Unknown Unknown   E6K, S68G, D123E, I135T, I159V, D177E, I202V, R211K  
CA700C0T-01 CA700C0T-01 Unknown Unknown   K11R, K64R, S162H, K173T, Q174K, Q207R, R211K  
CA700C2L-01 CA700C2L-01 Unknown Unknown   D123E, S162C, K166KR, R211K  
DA700B27-01 DA700B27-01 Unknown Unknown   K20KR, V60I, K104KR, E204Q, Q207E, R211K, E248N, K249Q  
DA700B5X-01 DA700B5X-01 Unknown Unknown   G45GR, D86N, D123K, I142M, S162F, I178L, V179I, R211K, P243S, V245E  
DA700B7B-01 DA700B7B-01 Unknown Unknown   V35I, E42K, S48T, D123E, Q174K, D177E, T200A, R211K  
DA700B97-01 DA700B97-01 None None M41L  K20R, V60I, K122E, I135V, E169D, K173R, Q174K, I178L, T200I, Q207E, R211K, E248D, D250E  
DA700BL0-01 DA700BL0-01 None None  E138A K11KR, D121DY, K122KE, S162Y, K173AT, Q174K, I178M, V179I, G196E, R211K  
DA700BLT-01 DA700BLT-01 Unknown Unknown   K122R, D123E, S162C, D177E, E204Q, Q207A, R211K  
DA700BM9-01 DA700BM9-01 Unknown Unknown     
DA700BMS-01 DA700BMS-01 Unknown Unknown   A62T, D123E, S162C, D177E, Q207E  
DA700BRY-01 DA700BRY-01 Unknown Unknown   K11Q, K122E, D123N, S162C, Q207A, R211K  
DA700BSQ-01 DA700BSQ-01 Unknown Unknown   I178M, T200A, Q207E, R211RK  
DA700BY4-01 DA700BY4-01 Unknown Unknown   K20R, K122E  
DA700BYD-01 DA700BYD-01 None None   K20R, V35VI, T69TA, K122E, S162C, T200TA, F214FL  
DA700BYX-01 DA700BYX-01 Unknown Unknown   D177E, I178IL, G196E, E204Q, Q207E Q145Q* 
DA700C2Z-01 DA700C2Z-01 Unknown Unknown M41L, D67N, L74V, M184V, T215F, K219E G190A P4S, V35L, S68G, A98S, K101A, K102R, K104R, K122E, S162C, D177E, V179I, R211K  
DA700C33-01 DA700C33-01 Unknown Unknown K70R A98G, Y181C V35M, K46Q, K64R, T69N, D123E, I135V, S162C, T200A, E204Q, Q207E, R211K, F214L, L228R  
DA700C3C-01 DA700C3C-01 Unknown Unknown M41L, T69S_SA, L210W, T215Y K103N, Y181C, H221Y K20KR, V90I, K122E, I135IV, I142V, K173E, G196E, L228R  
DA700C3W-01 DA700C3W-01 Unknown Unknown M41L, T69D, L74I, M184V, L210W, T215Y, K219R K103N P4S, K32N, V35I, T39A, E40F, K43E, A98S, K102KR, V111I, V118I, K122E, I135K, I142T, V179I, T200K, H208Y, R211K, L228V  
EA7009WL-01 EA7009WL-01 RTI RTI  E138Q, V179D, Y188F E6D, V8I, K102Q, K122E, T200A, Q207G, R211K, V245Q, E248D  
EA7009Y0-01 EA7009Y0-01 Unknown Unknown   K11T, K49R, R83K, I142IV, S162C, T165I, I178M, G196E  
EA7009YT-01 EA7009YT-01 Unknown Unknown   S162C, K173Q, E204Q, Q207A, R211K, F214L, E248D  
EA700B32-01 EA700B32-01 Unknown Unknown   E6D, V35I, K49R, I135T, S162C, E203K, E204Q, Q207E, V245E, E248D  
EA700B50-01 EA700B50-01 Unknown Unknown   S162A, D177E, I178M, E194K, R211K, D237N, V245Q, E248K  
EA700BHX-01 EA700BHX-01 Unknown Unknown   R83K, S162A, K173Q, T200A  
EA700BPS-01 EA700BPS-01 Unknown Unknown   D123DE, S162C, E204Q, Q207A, R211K  
EA700BXC-01 EA700BXC-01 Unknown Unknown   E6D, I135V, S162C, D177E, T200A, E204Q, Q207A, R211K  
EA700BY0-01 EA700BY0-01 Unknown Unknown   K49R, V60I, R83K, D123E, I135T, S162A, Q174E, R211K  
EA700C14-01 EA700C14-01 Unknown Unknown   T39A, V60I, R83K, K102Q, S162A, R211K  
EA700C1D-01 EA700C1D-01 RTI RTI K70R, M184V G190A V35I, K122E, D123G, E169D, I178M, V179I, T200A, Q207E  
FA7009YB-01 FA7009YB-01 RTI RTI M184V, T215Y V108I S68G, K122P, D123E, S162C, D177E, I178L, T200A, E204Q, Q207A, R211K, V245E, S251N  
FA700B3Q-01 FA700B3Q-01 None None   I178M, T200A, V245E  
FA700BB5-01 FA700BB5-01 Unknown Unknown   R83K, D123E, I135T, S162A, K173N, D177E, T200A, E203D, R211K  
FA700BG4-01 FA700BG4-01 Unknown Unknown   S162C, E204Q, Q207A, R211K, P243S, V245K, E248D  
FA700BMG-01 FA700BMG-01 None None V75I Y181C I31L, K122E, S162A, I178M, T200I, Q207K, R211K  
FA700BRF-01 FA700BRF-01 None None M184V K103N, V108I, P225H K122P, I135T, S162C, E169D, D177E, I178L, E204Q, Q207A, R211K  
FA700BVS-01 FA700BVS-01 Unknown Unknown   V35T, E40D, K122E, I135T, S162C, E203G, Q207E, R211K, F214L  
FA700BZ1-01 FA700BZ1-01 Unknown Unknown   K104R, A158S, T165I, E169D, D177E, G196E, I202V, R211K  
FA700C3H-01 FA700C3H-01 Unknown Unknown   V35IT, K49KR, R83RK, K122E, I135T, S162C, Q207E, F214L  
FA700C3R-01 FA700C3R-01 Unknown Unknown   K22R, V35T, T39A, I178M, R211K  
GA7009x9-01 GA7009x9-01 Unknown Unknown   V35T, R72RK, R83K, D123E, I135T, T200A, R211N, E248D  
GA700B9L-01 GA700B9L-01 Unknown Unknown   R83K, D123E, I135T, S162Y, R211G, P243H, V245E, E248D  
GA700BPM-01 GA700BPM-01 None None T215S  I178M, R211K  
GA700BRR-01 GA700BRR-01 Unknown Unknown   K20KR, E28EA, K49Q, K102Q, A158S, S162A, D177E, I178M, V189I, I202IV, R211K  
GA700BSL-01 GA700BSL-01 Unknown Unknown   V35M, S48Q, K49R, K104Q, K122R, D123E, S162C, D177E, I178L, E204Q, Q207A, R211K  
GA700BT0-01 GA700BT0-01 Unknown Unknown   R83K, K102Q, S162A, G196E, R211K  
GA700BZC-01 GA700BZC-01 Unknown Unknown   V35I, S162C, G196E, E204Q, Q207A, R211K  
GA700C18-01 GA700C18-01 Unknown Unknown   K20R, D123DN, I142V, S162A, T165I, K173Q, Q207E, R211K  
HA700B4B-01 HA700B4B-01 Unknown Unknown   V35VI, S48ST, S162C, D177E, T200A, E204Q, Q207A, R211K, E248N, D250E, S251C  
HA700BLZ-01 HA700BLZ-01 Unknown Unknown   K122KE, K173E, I178M, R211RK  
HA700BPY-01 HA700BPY-01 None None   K122KE, S162C, Q207A, L210LF, R211KQ I5IS, L12L*, W229W* 
HA700BXV-01 HA700BXV-01 None None  V106I K49R, A98S, K122E, D177E, Q207E  
HA700BY8-01 HA700BY8-01 RTI RTI   E6K, V35I, K49Q, R83K, V90I, D121Y, K122E, I142K, S162A, R211T  
HA700C0B-01 HA700C0B-01 Unknown Unknown   K104N, K122P, I135T, S162A, D177E  
HA700C2G-01 HA700C2G-01 Unknown Unknown   K20R, V35I, G196E, E204Q, Q207E, R211K, F214L  
HA700C2Q-01 HA700C2Q-01 Unknown Unknown D67G, K70R, T215Y, K219E K103N, V179F, Y181C T69N, K101R, K122E, I135T, S162A, T165I, G196E, I202V, R211K, L228H  
JA700B14-01 JA700B14-01 Unknown Unknown   K49R, I135V, E204K, Q207E, P243S, V245T, D250E  
JA700B4P-01 JA700B4P-01 None None   S162T, I178M  
JA700BNZ-01 JA700BNZ-01 None None  K103N V10A, K11KR, K122P, D123E, S162N, K166R, I178L, G196E, E203Q, Q207E  
JA700BP4-01 JA700BP4-01 Unknown Unknown   E6ED, E42EK, K122KE, D123DN, I135R, S162A, G196E, F214L W71W*, G213GE 
JA700BQW-01 JA700BQW-01 Unknown Unknown   K20R, K49R, I50V, V60I, I135T, S162C, Q174N, T200A, R211K  
JA700BXP-01 JA700BXP-01 None None M184MV, T215Y K101KE, K103NS, V106VI, V179VF, Y181C, G190A, H221Y K20R, V90VI, I142V, S162C, I178V, G196K, T200A, K201M, E204N, Q207E, R211K, L228R  
JA700C1S-01 JA700C1S-01 Unknown Unknown   K122E, D123G, I135T, S162A, K173T, Q174QKR, R211K  
KA7009WX-01 KA7009WX-01 Unknown Unknown   T39A, V60I, A98S, I135V, I142V, D177E, T200A, Q207G, R211K, V245E  
KA7009Z3-01 KA7009Z3-01 Unknown Unknown   I135T, S162C, T200A, E204Q, Q207A, R211K, D237E, E248DN  
KA7009ZG-01 KA7009ZG-01 Unknown Unknown   K20R, D123E, D177E, G196E, R211K, V245Q, D250E  
KA7009ZT-01 KA7009ZT-01 Unknown Unknown   S162A, K173Q, Q207E, R211K, V245K, D250E  
KA700B05-01 KA700B05-01 Unknown Unknown   A158S, R211K, V245E, E248D  
KA700B1G-01 KA700B1G-01 Unknown Unknown   S162C, D177E, I178M, T200I, E203D, E204Q, Q207A, R211K, E248D  
KA700B1T-01 KA700B1T-01 Unknown Unknown   S162C, D177E, T200A, E204Q, Q207A, R211K, F214L, E248D  
KA700B3D-01 KA700B3D-01 Unknown Unknown   K122E, D177E, I178M, Q207E, R211K  
KA700BMX-01 KA700BMX-01 None None  V179E V35T, K122P, S162N, D177E, I178V, D192N, E204K, Q207D  
KA700BPG-01 KA700BPG-01 RTI RTI M41L, L74I, V75A, M184V, L210W, T215Y K103S, V108I, H221Y S3C, K32Q, V35L, E44D, S68G, A98S, K122E, D123E, D177E, V179I, E203D, R211K  
KA700BR2-01 KA700BR2-01 Unknown Unknown   V60I, K64R, I135V, S162C, P170PS, E204Q, Q207A, R211K  
KA700BRL-01 KA700BRL-01 Unknown Unknown   V35I, S48T, D121H, D123E, S162C, I178L, V179VI, E204Q, Q207A, R211K  
KA700BTY-01 KA700BTY-01 None None   A98S, V118VI, I135V, T139A, T200A, E204Q, Q207A, R211K, F214L  
KA700BZJ-01 KA700BZJ-01 None None  V106I K49KR, A98S, K122E, D177E, Q207E