Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Banin (2019)
Title Near full genome characterization of HIV-1 unique recombinant forms in Cameroon reveals dominant CRF02_AG and F2 recombination patterns.
Citation J Int AIDS Soc
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 18
NumPts 18
Subtype CRF02_AG, F, A

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
BDHS24_2 BDHS24_2 None    Q2H, R8P, K20M, E35D, M36I, N37D, R41K, Q61L, I62V, L63P, H69Q, V77I, L89M Q7Y, V32E, V75G 
BDHS33 BDHS33 Unknown    I13IV, I15IV, G16GE, K20KIM, E35ED, M36I, R41K, H69KQ, K70KR, L89M  
LB016_1 LB016_1 None    L10V, I13V, K14T, I15V, G16E, L19T, K20I, E35D, M36I, H69K, L89M  
LB069_1 LB069_1 None    I13V, K20R, E35N, M36I, N37D, R41K, K43R, D60E, Q61D, C67Y, H69K, K70R, L89M  
LB082_1 LB082_1 None    I15V, L19Q, K20R, E35D, M36I, R41K, H69K, K70R, L89M  
LB089_1 LB089_1 None    I13V, K14R, G16E, K20I, M36I, R41K, K55R, H69K, K70R, L89M  
LB095_1 LB095_1 None    I13V, K14R, G16E, K20I, M36I, R41K, K55R, H69K, K70R, L89M  
LB104_1 LB104_1 None    I13V, K20R, E35N, M36I, N37D, R41K, K43R, D60E, Q61D, C67Y, H69K, K70R, L89M  
MDC131_3 MDC131_3 None    I15V, E35D, M36I, R41K, H69Q, L89M  
MDC179_2 MDC179_2 None    L10V, I13V, K14T, I15V, G16E, L19T, K20I, E35D, M36I, H69K, L89M  
NYU1122_1 NYU1122_1 None    L10V, I13V, K14T, I15V, G16E, L19T, K20I, E35D, M36I, H69K, L89M  
NYU119_3 NYU119_3 Unknown    I15V, E35D, M36I, R41K, H69Q, L89M  
NYU124_2 NYU124_2 None    I15V, E35D, M36I, R41K, H69Q, L89M  
NYU129_5 NYU129_5 None    I13V, I15V, K20I, M36I, R41K, I64M, H69K, L89M  
NYU1999 NYU1999 None    L10V, I13V, K14T, I15V, G16E, L19T, K20I, E35D, M36I, H69K, L89M  
NYU2140_1 NYU2140_1 None    L10V, I13V, K14T, I15V, G16E, L19T, K20I, E35D, M36I, G51E, H69K, L89M  
NYU6541_6_bulk NYU6541_6_bulk None    L10V, I15V, K20R, E35D, M36I, R41K, R57K, I72V, L89M, I93L  
NYU6556_3 NYU6556_3 None    L10I, T12K, I13V, K14N, K20V, M36I, N37D, G49E, C67Y, H69K, K70R, L89M