Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Azam (2013)
Title Emergence of drug resistance-associated mutations in HIV-1 subtype C protease gene in north India.
Citation Virus Genes
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 104
NumPts 104
Subtype C, A, CRF08_BC, CRF82_cpx, CRF65_cpx, CRF62_BC

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 104 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
None    T12S, K14R, I15V, G16A, L19I, M36I, N37D, R57K, H69K, V82I, I93L  
AE AE None    I15V, L19I, M36I, R41K, L63P, H69K, I93L  
AHDR AHDR None    T12S, K14R, I15V, L19I, M36I, R41K, L63A, H69K, I93L  
AMU-A1 AMU-A1 None    I15V, G16E, L19I, M36I, L63T, H69K, L89M, I93L  
AMU-A2 AMU-A2 None    T12S, K14R, I15V, L19T, M36V, R41K, L63P, H69K, I72V, L89M  
AMU-B1 AMU-B1 None    T12S, I13V, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L  
AMU-B2 AMU-B2 None    T12S, K14R, G17D, L19I, M36I, R41K, L63T, E65D, H69K, T74A, I93L  
AMU-C1 AMU-C1 None    T12S, I15V, G16E, L19I, M36I, R41K, L63V, H69K, L89M, I93L  
AMU-C2 AMU-C2 None    T12S, I15V, L19I, M36I, R41K, K45R, D60E, L63P, H69K, L89M, I93L  
AMU-C3 AMU-C3 None    T12P, L19I, M36I, R41K, K45R, L63P, I64L, H69K, I85V, L89M, I93L  
AMU-D1 AMU-D1 None    T12A, I13V, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
AMU-D2 AMU-D2 None    T12P, K14R, I15V, L19T, M36I, N37D, R41K, D60E, Q61E, L63P, H69K, I93L  
AMU-D3 AMU-D3 None    I13V, I15V, K20R, E35D, M36I, N37D, R41K, R57K, Q61E, H69K, L89M  
AMU-E1 AMU-E1 None    I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
AMU-E2 AMU-E2 None    T12S, K14R, I15V, G17D, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
AMU-E3 AMU-E3 None    T12P, L19I, K20R, E35D, M36I, N37D, R41K, K45R, L63P, I64L, H69K  
AMU-F1 AMU-F1 None    T12S, I15V, L19K, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, L89M, I93L  
AMU-F2 AMU-F2 None    I13V, L19I, E35D, M36I, N37D, R41K, K45R, R57K, I62V, L63V, H69K, L89M  
AMU-F3 AMU-F3 None    T12S, I15V, L19T, M36V, N37D, R41K, L63T, H69K, V82I, I93L T26A, D30S, V32M 
AMU-G1 AMU-G1 None    T12S, I15V, L19I, M36I, R41K, L63S, H69K, L89M, I93L  
AMU-G2 AMU-G2 None    T12S, K14R, I15V, G16A, L19T, M36I, R41K, L63P, H69K, K70R, I93L  
AMU-G3 AMU-G3 None    I13V, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
AMU-H1 AMU-H1 None    T12S, K14R, I15V, L19T, E35D, N37D, R41K, H69K, K70R, T74A, I93L  
AMU-H2 AMU-H2 None    T12S, I15V, L19I, L63P, H69K, K70R, L89M, I93L  
AMU-H3 AMU-H3 None    T12S, L19I, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
AMU-I1 AMU-I1 None    T12S, I15V, L19V, E35D, M36I, N37D, R41K, H69K, T74S, L89M, I93L  
AMU-I2 AMU-I2 None    T12S, L19I, P39Q, R41K, L63P, H69K, T74S, V77I, L89M, I93L  
AMU-I3 AMU-I3 None    T12S, I15V, L19I, D60E, Q61E, L63T, H69K, I93L  
AMU-J1 AMU-J1 None    T12S, K14R, L19T, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
AMU-J2 AMU-J2 None    T12S, I15V, L19M, N37S, P39S, R41K, I62V, L63P, H69K, L89M  
AMU-J3 AMU-J3 None    T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
AMU-K1 AMU-K1 None    T12S, I15L, L19I, M36I, R41K, H69K, L89I, I93L I62N 
AMU-K2 AMU-K2 None    T12P, I15V, L19T, M36V, R41K, L63P, H69K, L89M, I93L G17A 
AMU-K3 AMU-K3 None    T12S, L19T, M36V, N37D, R41K, L63S, H69K, V82I, I93L  
AMU-L1 AMU-L1 None    I13V, I15V, L19I, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
AMU-L2 AMU-L2 None    I13V, L19I, M36I, R41K, D60E, Q61E, L63A, H69K, V82I, L89M, I93L  
AMU-L3 AMU-L3 None    T12S, K14R, I15V, L19I, M36L, N37S, R41K, L63A, H69K, L89M, I93L E35E_TS 
AMU-M1 AMU-M1 None    T12S, I13V, I15V, L19I, M36I, L63P, H69K, T74S, L89M, I93L  
AMU-M2 AMU-M2 None    T12S, I15V, L19I, M36I, R41K, L63V, H69K, I93L  
AMU-M3 AMU-M3 None    T12S, K14R, I15V, L19I, M36L, R41K, L63P, I64M, H69K, L89M, I93L E35E_TN 
AMU-N1 AMU-N1 None    T12S, I15V, L19T, K20I, M36I, P39Q, R41K, L63T, H69K, L89M, I93L  
AMU-N2 AMU-N2 None    L19T, E35D, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
AMU-O1 AMU-O1 None    T12S, K14R, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
AMU-O2 AMU-O2 None    T12S, I15V, L19I, M36I, R41K, K45R, L63P, I64L, H69K, L89M, I93L D25G 
AMU-P1 AMU-P1 None    T12S, K14R, I15V, L19I, M36I, N37S, R41K, L63A, H69K, L89M, I93L  
AMU-P2 AMU-P2 None    T12P, I15V, L19I, M36L, R41K, D60E, Q61E, L63P, I64M, H69K, L89M, I93L  
AMU-Q1 AMU-Q1 None    T12S, I15V, L19K, M36I, R41K, K45R, R57K, L63S, H69K, L89M, I93L  
AMU-Q2 AMU-Q2 None    T12P, I15V, L19I, M36I, R41K, K45R, L63P, I64L, H69K, L89M, I93L  
AMU-R2 AMU-R2 None    I15V, L19I, D25E, M36L, R41K, L63T, H69K, I93L T26P, D30S, V32M 
AMU-S2 AMU-S2 None    T12S, I15V, L19I, N37S, P39S, R41K, K45R, I62V, L63P, H69K, L89M D25G 
AMU-T2 AMU-T2 None    T12S, L19T, P39Q, R41K, L63P, H69K, V77I, L89M, I93L  
AMU-U2 AMU-U2 None    G16A, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
None    T12S, I15V, L19I, M36I, P39S, R41K, L63P, H69K, I72V, I93L  
BE BE None    T12S, K14R, G16E, L19I, M36I, R41K, K45R, L63A, H69K, L89M  
BHDR BHDR None    T12S, I15V, L19I, E35D, M36I, R41K, K45R, L63A, H69K, V82I, I93L  
None    I13V, E35D, M36I, N37D, R41K, K45R, R57K, C67Y, H69K, L89M  
CE CE None    T12S, K14R, I15V, L19I, M36I, R41K, K45R, L63P, I64L, H69K, L89M, I93L  
CHDR CHDR None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
None    T12P, L19T, M36V, R41K, L63P, H69K, I72V, L89M, I93L  
DE DE None    T12P, K14R, I15V, E35D, M36I, N37D, L63P, H69K, L89M, I93L  
None    T12S, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
EE EE None    T12S, I15V, L19T, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L  
None    T12S, I15V, L19I, M36L, R41K, I62V, L63P, H69K, T74A, L89M, I93L  
FE FE None    T12S, I15V, L19I, M36I, L63P, H69K, L89M, I93L  
None    K14R, L19I, E35D, R41K, L63P, H69K, T74S, L89M, I93L  
GE GE None    T12S, K14R, I15V, G16A, L19T, M36I, N37D, R57K, H69K, V82I, I93L  
None    T12P, K14R, I15V, L19T, M36I, R41K, D60E, Q61E, L63P, H69K, K70R, I93L  
None    L19V, M36I, R41K, I62V, L63P, H69K, T74A, L89M, I93L  
IE IE None    T12S, K14R, I15V, L19I, M36T, N37S, R41K, L63A, H69K, L89M, I93L  
None    T12S, I15V, L19T, R41K, D60E, Q61E, L63T, H69K, I93L  
JE JE None    T12S, K14R, I15V, L19T, M36I, N37T, R41K, L63P, H69K, K70R, L89M, I93L  
None    I13V, E35D, M36I, N37D, R41K, K45R, R57K, C67Y, H69K, L89M  
KE KE None    T12S, K14R, I15V, L19T, M36L, R41K, L63P, H69K, I93L  
None    T12S, K14R, I15V, G17D, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
LE LE None    T12P, I15V, L19I, M36V, R41K, L63P, I64M, H69K, L89M, I93L  
None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93L  
ME ME None    T12S, L19M, K20R, M36I, R41K, L63S, H69K, I93L  
None    T12S, K14R, I15V, L19T, M36I, R41K, L63P, H69K, L89M, I93L  
None    T12S, I15V, L19I, M36L, R41K, L63V, H69K, L89M, I93L  
OE OE None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, V82I, I93L  
None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
PE PE None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
None    T12S, I15V, L19T, R41K, L63P, H69K, I72V, I93L  
QE QE None    T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L  
None    T12S, K14R, I15V, L19T, M36L, R41K, I62V, L63P, H69K, T74A, L89M, I93L  
RE RE None    T12P, I15V, L19I, M36L, R41K, L63P, I64M, H69K, L89M, I93L  
None    T12S, L19I, M36I, R41K, K45R, L63T, H69K, L89M, I93L  
SE SE None    T12S, K14R, I15V, L19I, K20R, M36I, R41K, L63P, H69K, I93L  
None    T12S, K14R, I15V, L19I, M36L, R41K, L63P, I64M, H69K, L89M, I93L  
TE TE None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
UE UE None    T12S, L19I, P39Q, R41K, L63P, H69K, T74S, V77I, L89M, I93L  
None    T12S, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L  
VE VE None    G16A, L19I, M36I, R41K, L63V, H69K, L89M, I93L  
None    T12S, I15V, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L  
WE WE None    T12S, L19T, R41K, L63P, H69K, K70R, V77I, L89M, I93L  
None    T12S, I15V, L19I, E35D, M36I, N37S, R41K, L63V, H69K, L89M, I93L  
XE XE None    T12S, K14R, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
None    T12S, I15V, L19I, M36L, R41K, I62V, L63P, H69K, T74A, L89M, I93L  
None    T12S, K14R, I15V, L19I, M36L, R41K, L63P, H69K, L89M, I93L