Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Megasari (2019)
Title The Emergence of HIV-1 Transmitted Drug Resistance Mutations Among Antiretroviral Therapy-naive Individuals in Buleleng, Bali, Indonesia.
Citation Acta Med Indones
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 30
NumPts 30
Subtype CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
BLL_201 BLL_201 None None  V106I E6D, V35T, K43R, K122E, D123N, I142V, V179I, T200K, Q207A, R211S, V245E, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, V381I, K390R, E399D, A400T, E432D, N447S, D471E, L491S, K512R, L517V, S519N, Q524E, A534S, Q547K, A554S  
BLL_202 BLL_202 None None  K103N V35T, T39E, D121H, K122E, I135T, S162C, K173S, Q174K, D177E, I178M, Q207A, R211S, V245E, A272P, K281R, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, A371V, K390R, A400T, T403M, E404D, E432D, N447S, L452I, D460N, D471E, Q480H, H483Y, L491S, I506L, K512R, L517I, S519N, Q524E, A534S, A554T  
BLL_204 BLL_204 None None   E6D, V35T, T39E, D121H, K122E, I135V, S162C, K173I, Q174K, D177E, I178M, Q207A, R211S, V245E, A272P, V276I, Q278H, T286A, E291D, V292I, I293V, L301F, E312T, D324E, I326V, I329V, G335D, Y342F, P345Q, M357K, G359S, K366R, T369A, A371V, K390R, A400T, T403M, K431R, E432D, D460N, D471E, Q480H, H483Y, L491S, I506L, K512R, L517I, S519N, Q524E, A534S, A554S  
BLL_205 BLL_205 None None   E6D, K11R, V35T, T39K, K122E, D123N, R172K, K173T, Q174K, D177E, Q207A, R211S, V245K, A272P, T286A, E291D, V292I, I293V, E312T, P321S, I329V, G335D, M357K, G359S, K366R, A371V, I375V, A400T, T403M, E432D, V435E, N447S, R448K, Q464K, D471E, Q480H, L491S, I506L, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_206 BLL_206 None None   E6D, V35T, T39K, K43E, R83K, K122E, D123S, R172K, K173M, Q174K, Q207A, R211S, K238R, V245E, A272P, T286A, E291D, V292I, I293V, E297T, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, A371V, A376S, K390R, A400T, T403M, E404D, E432D, N447S, R461K, Q464K, D471E, Q480H, L491S, I506L, K512R, L517I, S519N, Q524E, A534S, A554S  
BLL_207 BLL_207 None None   E6D, V35T, T39E, E40D, R83K, D121H, K122E, S162C, K173A, Q174K, D177E, I178V, Q207A, R211S, K238R, V245E, A272P, T286A, E291D, V292I, I293V, L301F, E312T, I329V, G335D, M357K, G359S, T369A, A371V, K390R, A400T, T403M, E432D, N447S, R448K, L452I, D460N, D471E, Q480H, H483Y, L491S, I506L, K512R, L517I, S519N, Q524E, A534S, A554S  
BLL_208 BLL_208 None None  V179D E6D, K20R, K32E, V35T, T39K, V60I, V111I, D121H, K122E, I135K, I142V, K166R, K173I, Q174K, T200I, Q207A, R211S, K238R, V245E, A272P, T286A, E291D, V292I, I293V, P294T, E297A, E312T, I329V, G335D, R356K, M357K, G359S, K366R, A371V, T386I, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_209 BLL_209 None None   E6D, K11T, V35T, T39E, S68G, T69N, V90I, V111I, K122E, D123N, K173R, Q174K, D177E, I178L, V179I, Q207A, R211S, V245E, V292I, I293V, K311T, E312T, P313S, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, T386I, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, Q547K, A554S  
BLL_210 BLL_210 None None   E6D, K20R, V35T, T39N, K122E, D123N, I135T, I142T, T165I, K173R, I178M, V179I, Q207A, R211S, K238R, V245E, K249R, A272P, L283I, V292I, I293V, E312T, D324G, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, K390R, A400T, E432D, N447S, R461K, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, E546D, Q547K, A554S  
BLL_211 BLL_211 None None   E6D, K11T, V35T, T39K, K43E, A98S, K102Q, K122E, D123N, K173I, Q174K, V179I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, Y342F, M357K, G359S, K366R, A371V, T386V, K390R, A400T, T403M, E432D, V435I, N447S, R448K, D471Q, Q480H, G490E, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_216 BLL_216 None None   E6D, V35I, T39K, V111I, K122E, D123N, E169D, K173R, D177E, V179I, T200K, I202V, E203D, Q207T, R211K, V245E, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, A371V, A376V, K390R, E399D, A400T, Q428H, E432D, N447S, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, I526V, A534S, Q547K, A554S R284S 
BLL_218 BLL_218 None None   E6D, K20R, E28A, V35T, T39K, A98S, D121H, K122E, I135T, I142V, T165I, K173I, Q174K, D177E, I178M, G196E, Q207A, R211S, K238R, V245E, A272P, K275R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, T386V, K390R, A400T, T403M, E432D, V435G, D471E, K476Q, Q480H, L491P, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_220 BLL_220 None None   E6D, K20R, E28A, V35T, T39K, K43E, A98S, D121H, K122E, I135T, I142V, T165I, K173I, Q174K, D177E, I178M, G196E, Q207A, R211S, K238R, V245E, K275R, K277R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, S379G, T386V, K390R, A400T, T403M, E432D, V435G, D471E, K476Q, Q480H, L491P, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_221 BLL_221 None None   V35T, T39N, G112A, I135R, T165I, R172K, K173S, Q174K, D177E, V179I, G196E, T200I, Q207A, R211K, V245E, A272P, V292I, I293V, E297Q, E312N, I326V, I329V, G335D, M357K, R358K, K366R, A371V, A376V, K390R, K395R, E396K, A400T, E432D, N447S, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, Q547K, A554S G359V, L391Y, T403E 
BLL_222 BLL_222 None None  E138A E6D, V35T, T39E, D76N, K122E, D123N, D177E, V179I, T200I, Q207A, R211S, V245D, A288S, V292I, I293V, E312T, I326V, I329V, G335D, Y342F, M357K, G359S, K366R, T369A, A371V, A376V, K390R, E399D, A400T, Q428H, E432D, V435A, N447S, D471E, Q480H, H483Y, Q487R, L491S, L517V, Q524E, L525M, A534S, N545K, Q547K, A554S F77V 
BLL_224 BLL_224 None None   E6D, K20R, V35T, T39E, K122E, D123N, S162C, K173I, Q174K, D177E, V179I, I202V, Q207A, L210S, R211S, V245E, A272P, E291D, V292I, I293V, E297K, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, V435I, Q464K, K465R, D471E, L491S, I506L, K512R, L517I, S519N, Q524E, A534S, A554S  
BLL_226 BLL_226 None None   E6D, K20R, V35T, T39K, K43E, V60I, K122E, D123S, T165I, K173T, Q174K, D177E, I178V, I202V, Q207A, R211S, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, E399D, A400T, T403M, E432D, V435A, G436E, N447S, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, A534S, A554S, K558R  
BLL_227 BLL_227 None None  G190A E6D, V35T, T39E, T107S, D121H, K122E, R125K, S162C, K173L, Q174K, D177E, I178V, E194K, Q207A, R211S, V245E, A272P, T286A, E291D, V292I, I293V, E297R, L310I, E312T, I326V, I329V, M357K, G359S, A371V, K390R, A400T, E432D, N447S, R448K, D460N, D471E, Q480H, L491S, I506L, K512R, E516D, L517V, S519N, Q524E, A534S, A554S P25L 
BLL_229 BLL_229 None None K219Q  E6D, V35T, T39D, K122E, D123S, K173R, Q174R, D177E, Q207A, R211S, K238R, V245E, A272P, K275R, T286A, E291D, V292I, I293V, A304E, E312T, V314M, I326V, I329V, G335D, M357K, G359S, K366R, A371V, S379G, T386I, A400T, T403M, E432D, N447S, E449D, L452Q, T470N, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_230 BLL_230 None None  V179F K20R, E28K, K32E, V35T, T39K, S48A, E53K, T69S, V106L, D110N, D113N, D121N, D123N, R125K, R143K, V148G, A158P, S163T, T165I, E169N, R172K, K173L, Q174K, D177K, E194K, G196K, H198P, R199K, E203K, E204K, R206K, Q207A, R211S, F214L, V245E, K275Q, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, D364N, K366R, T369A, E370D, A371V, K390R, K395R, A400T, E404D, E432D, V435I, A446T, L452I, D460N, D471E, E478K, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S G93E, V111G, M184R, H221P 
BLL_231 BLL_231 None None   E6D, K11S, V35T, T39N, V60I, K122E, D123N, I142V, E169D, K173T, Q174K, D177E, I178M, Q207A, R211S, V245E, E248D, I293V, P294T, E312N, V317A, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, K390R, E399D, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517I, S519N, Q524E, A534S, Q547K, A554S  
BLL_234 BLL_234 None None   E6D, V35T, T39K, K122E, I135V, V179I, I195L, T200K, Q207A, R211S, V245E, K249Q, V292I, I293V, E312N, I326V, M357K, G359S, K366R, T369A, A371V, A376V, K390R, E399D, A400T, Q428H, E432D, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, Q547K, A554S K43L 
BLL_236 BLL_236 None None   E6D, K32T, V35T, T39K, K102R, K122E, D123N, T165I, K173N, Q174K, D177E, V179I, T200K, I202V, Q207A, R211S, V245E, A272P, I293V, E312N, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, K390R, E399D, A400T, E432D, N447S, D471E, Q480H, L491S, K512R, L517I, S519N, Q524E, A534S, Q547K, A554S Q428S 
BLL_237 BLL_237 None None T215S  E6D, K11T, V21I, V35T, T39K, K43E, V60I, W88S, V118I, K122E, D123S, I135L, S162Y, K173I, Q174K, D177E, I178V, V179I, I202V, Q207A, R211K, V245E, L283I, E291D, V292I, I293V, E312T, I329V, G335D, M357K, G359S, K366R, A371V, V381I, K390R, A400T, E404D, E432D, V435I, D460N, Q464K, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_238 BLL_238 None None   E6D, V8I, K11S, V35T, T39N, K122E, D123N, I135T, I142V, K173M, Q174K, D177E, V179I, I202V, Q207A, R211S, V245Q, I293V, E312N, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Y, L491S, E492K, K512R, L517V, S519N, Q524E, A534S, Q547K, A554S Q500L 
BLL_239 BLL_239 None None   K20R, E28K, K32E, V35T, T39K, T69S, K122E, D123N, S162C, K173L, Q174K, D177E, T200E, I202V, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, K311R, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, E370D, A371V, K390R, A400T, E404D, E432D, V435I, L452I, D460N, Q464E, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
BLL_240 BLL_240 None None  E138G E6D, V8I, K11S, V35T, T39N, K122E, D123N, I135T, I142V, K173M, Q174K, V179I, I202V, Q207A, R211S, V245Q, I293V, E312N, I326V, I329V, G335D, M357K, K366R, A371V, A376V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Y, L491S, E492K, K512R, L517V, S519N, Q524E, A534S, Q547K, A554S G359Y 
BLL_241 BLL_241 None None   I5V, E6D, V35T, T39A, V111I, G112A, K122E, I135K, S163T, K173I, Q174K, D177E, I178M, T200A, Q207T, L210S, R211S, K238R, V245Q, T286A, V292I, I293V, E297K, A304E, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, E432D, V435I, N447S, K454R, D471E, Q480H, L491P, K512R, L517I, S519N, Q524E, A534S, A554S E430A, K530E 
BLL_249 BLL_249 None None   E6D, K11T, K20R, V35T, T39K, K43E, V60I, D86E, K122E, D123N, K166R, K173I, Q174K, D177E, T200I, Q207A, R211S, V245D, E291D, V292I, I293V, E312T, I326V, I329V, G335D, R356K, M357K, G359S, K366R, A371V, T386I, K388R, K390R, E399D, A400T, T403M, E432D, N447S, D471E, Q480H, I482L, H483Y, L491S, K512R, L517V, S519N, Q524E, E529D, A534S, A554S  
BLL_250 BLL_250 None None   E6D, V35T, T39A, R83K, K122E, D123N, T165I, K173G, Q174K, D177E, V179I, G196E, T200K, I202V, Q207A, R211S, V245E, A272P, I274V, V292I, I293V, E312T, I329V, G335D, M357K, G359S, K366R, A371V, A376V, E399D, A400T, E432D, N447S, D471E, Q480H, L491S, L517V, S519N, Q524E, A534S, Q547K, A554S Q428S 

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