Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Takou (2019)
Title HIV-1 drug resistance testing is essential for heavily-treated patients switching from first- to second-line regimens in resource-limited settings: evidence from routine clinical practice in Cameroon.
Citation BMC Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 100
NumPts 100
Subtype CRF02_AG, A, G, CRF11_cpx, F, D, CRF37_cpx, CRF22_01A1, CRF13_cpx, CRF18_cpx, J, G + J, CRF05_DF, C, CRF01_AE

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
10122 10122 None    I13V, K20I, M36I, R41K, I64M, H69K, L89M  
10124 10124 None    L10LV, T12A, I13V, I15V, K20I, E35D, M36I, R41K, K43R, Q61H, L63P, G68E, H69R, K70R, L89M  
1111 1111 None    T12S, I15V, G16E, L19I, E35D, M36MI, P39S, R41K, D60DE, Q61DN, L63H  
1645 1645 None    L10I, V11T, I13V, K14R, K20I, E35D, M36I, N37I, L63P, H69K, A71T, L89I  
2894 2894 None    G16A, E35G, M36I, N37E, R57K, D60E, Q61E, I62V, L63I, C67E, H69K, V77I, L89M  
3071 3071 None    L19P, K20I, M36I, R41K, L63V, H69K, L89M  
3346 3346 None    I13V, K14R, L19P, K20I, L33V, E35G, M36I, N37T, R41K, L63S, H69K, K70R, V77I, L89M  
5150 5150 None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
5272 5272 None    I13V, K20I, M36I, R41K, L63P, H69K, L89M K70S 
5841 5841 None    G16A, K20R, M36I, N37D, D60E, Q61E, L63A, C67E, H69K, V77I, V82I, L89M  
CIRCB-10305 CIRCB-10305 None    I13V, K14R, I15IV, G16E, K20I, M36I, R41K, H69K, K70E, L89I  
CIRCB-10362 CIRCB-10362 None    I13V, G17E, K20I, M36I, L63S, H69K, L89M  
CIRCB-4061 CIRCB-4061 None    I13V, K14R, G17E, Q18H, K20I, E34K, M36I, N37E, P39V, D60E, Q61N, I62M, L63A, C67E, H69K, I72V, V77I, L89M  
CIRCB-4069 CIRCB-4069 None    T12I, I13V, G17E, K20I, E34K, M36I, R57K, Q61N, I62LM, L63N, C67E, H69K, I72T, V77VI, L89M  
CIRCB-7205 CIRCB-7205 None    L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
CIRCB-7759 CIRCB-7759 None    R8RP, L10LI, I13V, L19LV, K20R, E35D, M36I, N37D, R41K, H69K, L89M E21E*, L90LW 
CIRCB-7815 CIRCB-7815 None    I13V, K14KR, G16GE, K20I, E35D, M36I, R41K, K43KR, H69K, K70KR, L89M, I93IM  
CIRCB-7842 CIRCB-7842 None    I13V, I15V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, V77I, L89M  
CIRCB-8995 CIRCB-8995 None    I15IV, K20R, M36I, R41K, L63AV, K70KR, I72IM  
CIRCB-9210 CIRCB-9210 None    I13V, K14R, G16E, K20I, M36MI, N37NS, R41K, I64M, H69K, K70R, L89M  
CIRCB-9281 CIRCB-9281 None    I15V, G16GA, Q18QE, E35D, M36I, N37D, R41RK, R57K, D60E, Q61E, L63A, C67EG, H69K, V77I, L89M  
CIRCB-9626 CIRCB-9626 None    I13IV, K14R, L19LI, K20I, E35N, M36I, R41K, I64M, H69K, L89M  
CIRCB-9936 CIRCB-9936 None    T12A, I13V, K14R, G16E, K20I, M36I, R41K, H69K, I72V, L89M  
CIRCB_10056 CIRCB_10056 None    I13V, K14R, K20I, M36I, R41K, H69K, V82I, L89M  
CIRCB_10061 CIRCB_10061 None    I13V, K14KR, K20I, L33V, E35G, M36IV, P39PS, R41K, K43Q, L63X, H69K, K70R, L89M  
CIRCB_10113 CIRCB_10113 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
CIRCB_10267 CIRCB_10267 None    T12TA, I13V, G16GE, L19LP, K20I, M36I, R41K, L63LP, H69K, K70R, I72IV, L89M  
CIRCB_10310 CIRCB_10310 None    L10V, T12TK, I13V, I15V, G16GE, G17GE, K20I, E35A, M36I, R41K, K45KR, L63FS, H69K, K70KR, L89M K14AT 
CIRCB_10381 CIRCB_10381 None    I13V, K14KR, K20I, M36I, R41K, L63LP, G68E, H69R, L89M  
CIRCB_10417 CIRCB_10417 None    I13V, E35D, M36I, R41K, L63S, H69K, L89M  
CIRCB_10429 CIRCB_10429 None    L10I, I13V, G16E, M36I, R41K, H69K, K70R, L89M  
CIRCB_10729 CIRCB_10729 None    L10V, I13V, K14R, G16E, L19P, K20I, M36I, R41K, K43R, I64M, H69K, K70R, L89M  
CIRCB_11441 CIRCB_11441 None    I13V, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M  
CIRCB_13261 CIRCB_13261 None    I13V, K14R, I15V, G17E, K20I, E35N, M36I, R41K, L63LP, H69K, K70R, L89M  
CIRCB_13678 CIRCB_13678 None    T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
CIRCB_14173 CIRCB_14173 None    I13V, K14R, K20I, E35N, M36I, N37D, R41K, H69K, L89M  
CIRCB_14356 CIRCB_14356 None    T12K, I13IV, K14R, I15V, K20I, M36I, N37D, R41K, H69K, K70R, L89M  
CIRCB_15083 CIRCB_15083 None    I13V, I15V, E35D, M36I, N37D, R41K, L63S, H69K, K70R, L89M  
CIRCB_15100 CIRCB_15100 None    L10I, V11T, T12K, I13V, K14M, I15V, K20I, E35D, M36I, R41K, L63P, I64L, H69K, L89I  
CIRCB_153 CIRCB_153 None    I13V, K20I, E34A, E35D, R41K, H69K, V77I, L89M  
CIRCB_15362 CIRCB_15362 None    I13V, G16GE, K20I, E35G, M36I, P39Q, R41K, H69K, V77I, L89M  
CIRCB_15884 CIRCB_15884 None    T12S, G16A, M36I, D60E, Q61E, I62V, L63T, C67E, H69K, L89M  
CIRCB_15911 CIRCB_15911 None    T12TA, I13V, K14KR, I15V, K20I, E35N, M36I, N37D, R41K, L63P, H69K, L89M  
CIRCB_15984 CIRCB_15984 None    I13V, K14R, G16GE, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
CIRCB_16254 CIRCB_16254 None  M46L, I54V, V82A L10F, G73GS, N83D, L89V T12I, I13A, K20R, A22V, L33I, E35D, M36I, N37D, R41K, I62V, L63P, H69K, T74S  
CIRCB_16693 CIRCB_16693 None    G16A, M36I, N37ND, D60E, Q61E, I62V, L63T, I64M, C67E, H69K, L89M  
CIRCB_17661 CIRCB_17661 None    I13V, K14KR, K20I, E35D, M36I, L38LI, R41K, L63P, H69K, L89M  
CIRCB_18493 CIRCB_18493 None    I13V, K14KR, I15V, K20I, E35N, M36I, N37E, R41K, H69K, L89M  
CIRCB_18938 CIRCB_18938 None    T12S, I15V, L19I, E35ED, M36MI, R41K, L63LP, H69K, T74A, L89M, I93L  
CIRCB_19131 CIRCB_19131 None    I15V, K20R, E35D, M36I, N37D, R41K, K45R, H69Q, V77I, L89M  
CIRCB_19193 CIRCB_19193 None    L10V, I13V, K14R, L19P, K20I, M36I, N37ND, R41K, H69K, K70KR, L89M  
CIRCB_19344 CIRCB_19344 None    I13V, K14R, G16E, L19I, K20I, M36I, R41K, H69K, K70R, I72V, L89M  
CIRCB_19402 CIRCB_19402 None    L10V, I13V, G16E, K20I, M36I, R41K, H69K, P79PS, L89M  
CIRCB_19937 CIRCB_19937 None    I13V, K14R, K20I, M36I, R41K, L63LM, I64M, H69K, L89M  
CIRCB_20014 CIRCB_20014 None   K43KT I13V, K14R, G17E, K20I, E34KQ, M36I, Q61N, I62M, L63N, C67E, H69K, I72T, V77I, L89M, T91V  
CIRCB_20051 CIRCB_20051 None    I13V, K20I, E35N, M36I, R41K, H69K, L89M  
CIRCB_21094 CIRCB_21094 None    L10LI, I13V, K14KR, G17E, K20I, M36I, R41K, I64M, H69K, K70R, L89M  
CIRCB_21152 CIRCB_21152 None    I13V, K20I, M36I, N37S, R41K, I64M, H69K, L89M  
CIRCB_21379 CIRCB_21379 None    L10I, I13V, L19P, K20I, E35D, M36I, N37D, R41K, L63S, H69K, L89M  
CIRCB_21457 CIRCB_21457 None    I13V, I15L, K20I, M36I, R41K, H69K, L89M  
CIRCB_21529 CIRCB_21529 None    I13A, K14KE, I15V, L19M, K20I, M36I, R41K, H69K, L89M  
CIRCB_21827 CIRCB_21827 None    I13V, K14R, I15V, K20I, M36I, R41K, H69K, K70R, L89M  
CIRCB_21859 CIRCB_21859 None    L10V, I13V, K14KR, K20R, M36I, N37D, R41K, H69K, K70R, I72V, L89M  
CIRCB_21869 CIRCB_21869 None    I13V, K20I, M36I, R41K, K43R, H69K, K70KR, L89M R87RQ 
CIRCB_21886 CIRCB_21886 None    I13V, K20I, M36I, R41K, H69K, K70R, L89M  
CIRCB_21901 CIRCB_21901 None    L10V, I13V, G16A, E35D, N37E, D60E, Q61E, C67E, H69K, L89M  
CIRCB_21993 CIRCB_21993 None    I13V, K14R, G17E, K20I, M36I, R41K, K43R, H69K, K70R, L89M  
CIRCB_22066 CIRCB_22066 None    I13V, G16E, K20I, E35D, M36I, R41K, L63M, I64M, H69K, K70R, L89M  
CIRCB_22373 CIRCB_22373 None    I13V, K14R, K20I, M36I, R41K, I64M, H69K, L89M  
CIRCB_22744 CIRCB_22744 None    L10I, I13V, K14R, K20I, E35D, M36I, P39S, R41K, Q61H, L63P, H69K, L89M  
CIRCB_22844 CIRCB_22844 None    I13V, K14KR, K20I, E35D, M36I, R41K, L63LP, H69K, K70KR, L89M  
CIRCB_22946 CIRCB_22946 None    T12TA, I13V, K14R, G16E, K20I, E35N, M36I, R41K, H69K, K70R, L89M  
CIRCB_22971 CIRCB_22971 None    I13V, K20I, E34T, M36I, P39A, R41K, I62V, H69K, V77I, L89M  
CIRCB_2792 CIRCB_2792 None    I13V, K14KR, K20I, M36I, N37S, R41K, H69K, L89M  
CIRCB_3072 CIRCB_3072 None    G16A, N37D, D60E, Q61E, L63T, C67E, H69K, V77I  
CIRCB_3379 CIRCB_3379 None    T12V, I13V, K20I, E35D, M36I, R41K, L63LP, H69K, L89M G16M 
CIRCB_3491 CIRCB_3491 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
CIRCB_3679 CIRCB_3679 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
CIRCB_4485 CIRCB_4485 None    L10V, I13V, K14R, L19LP, K20V, M36I, R41K, I64IL, H69K, L89M  
CIRCB_4649 CIRCB_4649 None    L10I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M  
CIRCB_4661 CIRCB_4661 None    L10I, K20KR, E35D, M36I, R41K, D60E, I62V, L63P, H69Q, I72V  
CIRCB_4925 CIRCB_4925 None    I13V, K14R, G16GE, K20I, M36I, R41K, H69K, L89M  
CIRCB_5504 CIRCB_5504 None    L10M, V11VI, I13V, K14KR, I15IV, L19P, K20I, E35D, M36I, R41K, L63LP, H69K, L89I  
CIRCB_6168 CIRCB_6168 None    L10V, I13V, I15V, L19LI, E35N, M36I, N37D, R41K, K43KR, H69K, L89M, Q92QR  
CIRCB_7657 CIRCB_7657 None    I15V, E35D, M36I, N37D, L63P, Q92QR  
CIRCB_7708 CIRCB_7708 None    L10N, V11I, T12TP, I13V, L19P, K20I, E35D, M36I, R41K, L63LR, H69K, K70R, L89M  
CIRCB_7943 CIRCB_7943 None    I13V, K14KR, K20I, E35Q, M36I, R41K, C67EG, H69K, V82I, L89M  
CIRCB_857 CIRCB_857 None   L33F I13V, E35D, M36I, N37D, R41K, K43R, R57K, H69K, K70R, L89M, T96TA  
CIRCB_8760 CIRCB_8760 None    I13V, K14R, K20I, M36I, R41K, H69K, I72M, L89M  
CIRCB_9243 CIRCB_9243 None    I13V, K14R, K20I, M36I, R41K, I64M, H69K, K70KR, I72IV, L89M  
CIRCB_9285 CIRCB_9285 None    I13A, K14R, I15V, K20I, M36I, R41K, L63LP, H69K  
CIRCB_9347 CIRCB_9347 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
CIRCB_9389 CIRCB_9389 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
CIRCB_9503 CIRCB_9503 None    T12K, I13IV, K20I, E34EK, M36I, N37D, R41K, L63G, H69K, K70KR, I72IV, L89M  
CIRCB_9568 CIRCB_9568 None    I13V, K14R, L19P, K20I, E35EG, M36I, R41K, L63LP, I64L, H69K, K70R, L89M  
CIRCB_9664 CIRCB_9664 None    I15V, G16A, E35D, M36I, R41K, I72T, L89F  
CIRCB_9782 CIRCB_9782 None    L10M, I13V, E35N, M36I, N37D, R41K, K43R, L63T, H69K, L89M  
CIRCB_9830 CIRCB_9830 None    I13V, K14R, G17E, K20I, E35ED, M36I, N37A, L63P, H69K, L89M  
CIRCB_9966 CIRCB_9966 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CRICB-9078 CIRCB-9078 None    L10M, V11VI, I13V, K14KR, I15IV, L19P, K20I, E35D, M36I, R41K, L63LP, H69K, L89I  

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