Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Raugi (2019)
Title Direct Submission.
Citation Unpublished
SelectedGene IN
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 20
NumPts 15
Host Human

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
H2A003 H2A003-S1 RAL    S39T, I172M, L220F, D256E E6EK, I28L, N30K, I133A, I180V, S197A, I201V, D222N, H280N 
H2A010 H2A010-S1 None    S39T, I172M, I210V, A215S, L250I, M275V, G278S V19I, R34K, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
H2A026 H2A026-S3 None    L2I, S23T, S39T, I72V, I172V, D222T, E246D, L250I, T255G N30K, A41P, S93T, I133V, I180V, L281V 
H2A057 H2A057-S1 None    S39T, I172V, T206A, E246D, L250I, R269K, G278S N30K, A41T, T60I, I133V, E167D, I180V, S197A, K221Q, D222N, T255A, I259V, I260V 
H2A077 H2A077-S2 None  S138T  S39T, I72V, I172V, T206A, D222K, E246D, L250I V19I, A41P, S93T, I133A, I180V, K221Q, T255S, I259V, I260V, M275L, H280N 
H2A099 H2A099-S2 RAL  S138T  N30Q, S39T, A41S, I72V, I84V, I172V, T206A, I210V, L220F, L250I, T255N, G278S I28L, S93T, I180V, S197A, D222N, I259V, M275L, S279P, H280N 
  H2A099-S3 RAL  S138T  N30Q, S39T, A41S, E69EK, I72V, I84V, S163SN, I172V, T206A, I210V, L220F, L250I, T255N, G278S I28L, S93T, I180V, S197A, D222N, I259V, M275L, S279P, H280N 
H2A108 H2A108-S1 None    S39T, I72V, I172V, L220F, E246D, L250I, G278S I28L, N30K, A41T, V129A, I133V, I180V, S197A, I201V, I210L, D222N, T255S, I259V, M275L, S279P, H280N 
H2A109 H2A109-S1 RAL    S39T, I72V, A119T, I172V, I180A, Q214H, E246D, L250I, G278S L2LP, I28L, N30K, N55D, S93T, Q96H, I133V, S197A, D222N, I259V, M275L, S279P, H280N 
H2A124 H2A124-S1 None    K14R, S23T, N30Q, S39T, T60V, I72V, A119P, S163N, I172V, A215R, K219N, L220F, R224Q, E246D, L250I R34K, A56T, L58I, S93T, I133V, I180V, S197A, D222N, F227Y, T255A, I259V, I260V, E274G, M275L 
  H2A124-S2 None    S23T, N30Q, S39T, T60V, I72V, S163N, I172V, A215R, K219N, L220F, R224Q, E246D, L250I I28L, R34K, A56AT, L58I, S93T, A119PS, I133V, I180V, S197A, D222N, F227Y, T255A, I259V, I260V, E274G, M275L 
H2A145 H2A145-S1 EVG, RAL 27   S39T, I72V, I84V, I172V, E246D, L250I, R269K V19I, N30K, N55D, I133V, I180V, D222N, T255A, I259V, I260V, S279P 
H2A178 H2A178-S1 None  S138T  E3G, S39T, I175V, A215T, L220F, E246D, L250I V19I, N30K, N55D, L58V, E125D, I133V, I180T, S197A, D222N, I259V, I260V, M275L, S279P 
  H2A178-S2 None  S138T  S39T, I175V, A215T, L220F, E246D, L250I V19I, N30K, N55D, L58V, E125D, I133V, I180T, S197A, D222N, I259V, I260V, M275L, S279P 
  H2A178-S3 RAL S138T  S39T, I175V, A215T, L220F, E246D, L250I V19I, N30K, N55D, L58V, E125D, I133V, I180T, S197A, D222N, I259V, I260V, M275L, S279P, G283S 
H2AZ569 H2AZ569-S1 None    S23V, N30Q, S39T, I72V, I133T, I172M, A215S I28L, R34K, A41T, E57D, S93T, A153S, I180V, S197A, I201M, D222N, T255A, I259V, I260V, M275L 
H2AZ677 H2AZ677-S1 None     A153G, I180V, D222N 
H2AZ751 H2AZ751-S1 None  S138T  S17T, S39T, M154MI, A169AT, A215S, Y226F S23C, I28L, N30T, L58I, A105AT, W132W*, I180V, S197A, F212Y, D222N, T255S, I259V, I260V, M275L 
STRB23 STRB23-S1 EVG 38 S138T  S39T, G70E, I72V, I172V, T206A, E246D, V249I, L250I I28L, N30K, A41P, I133V, E167K, I180T, M183I, D222N, I260V, E274D, M275L, H280N 
  STRB23-S2 EVG 52 G140S, Q148R  E3G, S23T, N30Q, S39T, T60V, S163N, I172V, T206A, A215R, K219N, L220F, R224Q, L250I, G278S, R284G V19I, L58V, A119S, H156L, I180V, S197A, D222N, F227Y, I259V, I260V, E274G, M275L, S279P