Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Telele (2019)
Title A viral genome wide association study and genotypic resistance testing in patients failing first line antiretroviral therapy in the first large countrywide Ethiopian HIV cohort.
Citation BMC Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 76
NumPts 76
Subtype C

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
ETHM06001 ETHM06001 None    I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHM06002 ETHM06002 None    T12S, I15V, L19T, K20R, M36I, R41K, Q61E, L63T, H69K, K70Q, L89M, I93L  
ETHM06003 ETHM06003 None    I13V, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
ETHM06004 ETHM06004 None    I15V, G16E, M36I, R41K, H69K, I93L  
ETHM06006 ETHM06006 None    T12A, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHM06007 ETHM06007 None    T12S, I15V, L19V, M36I, R41K, L63S, H69K, I93L  
ETHM06008 ETHM06008 None    I15V, L19T, M36I, R41K, L63P, H69K, L89M, I93L  
ETHM06009 ETHM06009 None    I15V, L19I, M36I, R41K, L63S, H69K, I93L  
ETHM06010 ETHM06010 None    I15V, M36I, N37D, R41K, D60E, L63P, H69K, I72M, L89M, I93L  
ETHM06011 ETHM06011 None    T12S, I15V, L19V, M36I, R41K, L63S, H69K, L89M  
ETHM06012 ETHM06012 None    T12S, I15V, G16E, L19I, M36I, L63A, H69K, I93L  
ETHM06013 ETHM06013 None    G16E, K20R, M36I, R57K, L63T, I64M, H69K, L89M, I93L  
ETHM06014 ETHM06014 None    T12A, K14R, I15V, L19I, M36I, R41K, L63P, H69Q, I93L  
ETHM06015 ETHM06015 None    I15V, M36I, R41K, Q61E, L63P, H69K, I93L  
ETHM06016 ETHM06016 None    I15V, M36I, R41K, Q61QE, H69K, I93L  
ETHM06017 ETHM06017 None    T12S, I15V, L19T, M36I, N37D, D60E, L63Q, I64L, H69K, L89M, I93L  
ETHM06018 ETHM06018 None    I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHM06019 ETHM06019 None    I15V, M36I, H69K, L89M, I93L  
ETHM06020 ETHM06020 None    K14R, I15V, G16E, M36I, R41K, H69K, L89M, I93L  
ETHM06021 ETHM06021 None    I15V, G16E, M36I, P39A, R41K, H69K, L89M, I93L  
ETHM06022 ETHM06022 None    I15V, L19I, M36I, R41K, L63H, H69K, L89M, I93L  
ETHM06023 ETHM06023 None    T12P, K14R, I15V, L19E, K20M, M36I, L63S, H69K, T74A, L89M, I93L  
ETHM06024 ETHM06024 None    K14R, I15V, M36I, R41K, H69K, L89M, I93L  
ETHM06025 ETHM06025 None    T12S, I15V, K20R, M36I, R41K, Q61E, L63C, H69K, L89M, I93L  
ETHM06026 ETHM06026 None    I15V, M36I, H69K, L89M, I93L  
ETHM06027 ETHM06027 None    I15V, L19E, K20R, M36I, R41K, H69K, I93L  
ETHM06028 ETHM06028 None    I15V, G16E, E35D, M36I, R41K, L63T, H69K, I93L  
ETHM06029 ETHM06029 None    I13M, I15V, G16E, E35D, M36I, R41K, L63T, H69K, Q92R, I93L  
ETHM06030 ETHM06030 None    T4I, L5F, L10V, G16A, M36I, R41K, R57G, H69K, T74S, L89M, I93L  
ETHM06031 ETHM06031 None    I15V, G16E, E35D, M36I, R41K, K45R, L63V, H69K, R87RK, I93L  
ETHM06032 ETHM06032 None    I15V, L19T, M36I, R41K, L63P, H69K, L89M, I93L  
ETHM06033 ETHM06033 None    T12S, I15V, L19I, M36I, H69K, L89M, I93L  
ETHM06034 ETHM06034 None    L19I, M36I, R41K, D60DE, L63LV, H69K, V82VI, L89M, I93L  
ETHM06035 ETHM06035 None    I15V, G16E, K20R, M36I, R41K, H69K, L89M, I93L  
ETHM06036 ETHM06036 None    L19I, M36I, R41K, L63LV, H69K, V82VI, L89M, I93L  
ETHM06037 ETHM06037 None    L10V, K14R, I15V, G16E, M36I, R41K, L63A, H69K, I93L  
ETHM06038 ETHM06038 None    K20R, M36I, N37D, R41K, H69K, V82I, L89M, I93L  
ETHM06039 ETHM06039 None    I3F, W6S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHM06041 ETHM06041 None    T12S, I13V, I15V, K20R, M36I, R41K, L63P, H69K, L89M, I93L  
ETHM06042 ETHM06042 None    T12S, K14KR, L19T, K20R, M36I, R41K, H69K, L89M, I93L  
ETHM06043 ETHM06043 None    I15V, E35D, M36I, R41K, H69K, L89M  
ETHM06044 ETHM06044 None    T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
ETHM06045 ETHM06045 None    T12TS, L19I, M36I, N37ND, R41K, L63IT, H69K, V82VI, L89M, I93L  
ETHM06046 ETHM06046 None    K14R, I15V, G16E, M36I, R41K, L63V, H69K, I93L  
ETHM06197 ETHM06197 None    T12S, I15V, G16GE, K20R, M36I, R41K, I62V, L63A, H69K, I93L  
ETHM06347 ETHM06347 None    I15V, G16E, K20R, M36I, R41K, I62V, L63G, H69K, I93L  
ETHM12002 ETHM12002 None    T12S, I15V, L19T, K20R, M36I, R41K, Q61E, L63T, E65D, H69K, K70Q, L89M, I93L  
ETHM12003 ETHM12003 None    I13V, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
ETHM12004 ETHM12004 None    I15V, G16E, M36I, R41K, H69K, L89M, I93L  
ETHM12005 ETHM12005 None    T12S, I15V, L19I, E35D, M36I, R41K, K45KR, D60E, L63S, I64V, H69K, I93L  
ETHM12006 ETHM12006 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHM12009 ETHM12009 None    I15V, L19I, M36I, R41K, L63S, H69K, I93L  
ETHM12011 ETHM12011 None    T12S, I15V, L19V, M36I, R41K, L63PS, H69K, L89M, I93IL  
ETHM12012 ETHM12012 None    T12S, I15V, G16E, L19I, M36I, L63A, H69K, I93L  
ETHM12013 ETHM12013 None    T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L  
ETHM12016 ETHM12016 None    I15V, M36I, R41K, L63S, H69K, L89M, I93L  
ETHM12018 ETHM12018 None    I15V, M36I, R41K, L63LP, H69K, L89M, I93L  
ETHM12019 ETHM12019 None    I15V, L19I, M36I, R41RK, H69K, L89M, I93L  
ETHM12023 ETHM12023 None    T12P, K14R, I15V, L19E, K20M, M36I, L63S, H69K, T74A, L89M, I93L  
ETHM12024 ETHM12024 None    K14R, I15V, M36I, R41K, H69K, L89M, I93L  
ETHM12037 ETHM12037 None    L10V, I15V, G16E, M36I, R41K, L63AE, H69K, I93L  
ETHM12038 ETHM12038 None    K20R, M36I, N37D, R41K, H69K, V82I, L89M, I93L  
ETHM12043 ETHM12043 None    I15V, E35D, M36I, R41K, L63LP, H69K, I72IT, L89M, I93IL  
ETHM12045 ETHM12045 None    T12S, L19I, M36I, R41K, Q61QE, L63T, H69K, L89M, I93L  
ETHM12048 ETHM12048 None    I15V, L19V, E35D, M36I, R41K, H69K, L89M, I93L  
ETHM12049 ETHM12049 None    I15V, M36I, R41K, H69K, L89M, I93L  
ETHM12050 ETHM12050 None    T12S, I15V, L19IT, M36I, P39PS, R41K, Q61N, L63T, H69K, T74S, L89M, I93L  
ETHM12051 ETHM12051 None    I13V, I15V, L19I, K20R, M36I, R41K, L63S, H69K, V82VI, L89M, I93L  
ETHM12052 ETHM12052 None    L10V, K14R, I15V, M36I, N37D, R41K, L63V, E65D, H69K, T74S, L89M, I93L  
ETHM12053 ETHM12053 None    T4P, W6R, R8G, T12S, D29N, E34K, E35K, M36I, R41K, D60E, L63T, H69K, L89M, I93L L5T, P9Y, V11D 
ETHM12054 ETHM12054 None    T12S, I15V, G16A, L19I, M36T, L63S, H69K, L89M, I93L  
ETHM12056 ETHM12056 None    K14R, I15V, M36I, R41K, H69K, L89M, I93L  
ETHM12057 ETHM12057 None    I15V, L19T, K20R, M36I, R41K, R57K, L63Q, H69K, K70R, L89M, I93L  
ETHM12058 ETHM12058 None    T12S, K14R, G16A, M36I, R41K, Q61E, H69K, L89M, I93L  
ETHM12213 ETHM12213 None    I15V, M36I, R41K, L63P, H69K, K70R, I93L  
ETHM12338 ETHM12338 None    K14R, I15V, M36I, R41K, L63Q, H69K, L89M, I93L  

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