Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kostaki (2019)
Title Spatiotemporal Characteristics of the Largest HIV-1 CRF02_AG Outbreak in Spain: Evidence for Onward Transmissions.
Citation Front Microbiol
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 390
NumPts 390
Subtype CRF02_AG, CRF63_02A1, CRF36_cpx, A, CRF06_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 390 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
01_008809 01_008809 None    I13V, K14KR, G16E, L19I, K20I, E35D, M36I, R41K, L63LIM, I64M, H69K, K70R, L89M  
01_867797 01_867797 None    I13A, K14R, K20I, M36I, R41K, I64V, H69K, L89IM  
ABES730718F ABES730718F None    I13V, K14R, G17E, K20I, M36I, R41K, L63P, H69K, K70R, L89M  
ABXX880821M ABXX880821M None    T12TI, I13V, K14R, G17E, K20I, E35D, M36I, L63S, H69K, L89M  
AGSU891020M AGSU891020M None    T12I, I13V, K14R, K20I, M36I, R41K, L63S, H69K, L89M  
ANMO811108F ANMO811108F None    I13A, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
BAXX710609M BAXX710609M None    I13V, K14R, G16X, G17E, K20I, E34EK, M36I, R41K, I64IM, H69K, K70R, L89M  
BENG580129F BENG580129F None    I13V, G17E, K20I, M36I, R41K, L63C, H69K  
BOCU590214M BOCU590214M None    W6L, I13A, K14R, K20I, M36I, R41K, L63P, H69K, K70R, L89I, I93IV  
CACA701106M CACA701106M None    T12IV, I13V, K14R, K20I, M36I, R41K, L63S, H69K, L89M  
CAXX780101F CAXX780101F None    I13V, K14R, K20I, M36I, R41K, L63LP, H69K, L89M  
COFE710624M COFE710624M None    I13V, K14R, G17E, K20I, M36I, R41K, H69K, K70R, L89M  
COSA720530M COSA720530M None    I13V, K14R, K20I, M36I, R41K, L63S, H69K, L89M  
COXX881129F COXX881129F None    I13V, K14R, K20I, E34ED, M36I, R41K, I64M, H69K, L89M  
CRRO640329M CRRO640329M None  M46MI  T12Q, I13V, K14R, G17E, Q18E, K20I, E35D, M36I, K43R, L63P, H69K, L89M  
DEGI661124M DEGI661124M None    I13V, K14R, G17E, K20I, E35ED, M36I, L63S, H69K, L89M  
DIXX800425M DIXX800425M None    V11I, I13V, K14R, K20I, N37R, R41K, K43R, H69K, L89M M36IN, L38S 
DOXX800902M DOXX800902M None    I13V, K14R, L19LI, K20I, M36I, R41K, L63LP, G68E, H69R, L89M  
EHXX790622M EHXX790622M None    I13V, K20I, M36I, R41K, H69K, V82VI, L89M  
ES02_01075 ES02_01075 None   N88ND K20I, E34EG, M36MI, R41RK, L63P, H69K, I72IV, L89I D60DG 
ES02_012660 ES02_012660 None    L10V, I13V, L19P, K20I, M36I, R41K, H69K, L89M  
ES02_069972 ES02_069972 None    T12TP, I13IV, K20I, E35K, M36I, N37D, R41K, R57K, H69K, K70R, L89M  
ES02_08295 ES02_08295 None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, L89M  
ES02_203403 ES02_203403 None    I13V, K14R, L19P, K20I, M36I, P39S, R41K, L63P, H69K, L89M  
ES02_245288 ES02_245288 None    I13V, K14R, G16A, M36I, N37E, R41K, H69K, K70R, L89M  
ES02_271560 ES02_271560 None    L10I, T12A, I13V, K14R, K20I, E35D, M36I, R41K, C67Y, H69K, K70R, L89M  
ES02_36204 ES02_36204 None    I13V, K14KR, L19P, K20I, M36I, N37D, R41K, I64IM, H69K, K70KR, L89M  
ES02_364623 ES02_364623 None    L10V, I13V, G16E, K20I, M36I, N37S, R41K, H69KQ, K70R, I72R, L89M  
ES02_36553 ES02_36553 None    L10I, I13V, L19P, K20I, M36I, N37D, H69Q, L89M  
ES02_37772 ES02_37772 None    I13V, I15V, K20I, M36I, R41K, I64M, H69K, L89M  
ES02_385595 ES02_385595 None    I13V, K14R, I15V, K20IV, M36I, P39LS, L63P, H69K, L89M  
ES02_395236 ES02_395236 None    L10V, I13V, L19I, M36I, R41K, L63P, H69K, L89M  
ES02_444082 ES02_444082 None    I13V, K14KR, K20I, M36I, R41K, K43R, L63S, H69K, L89M  
ES02_456369 ES02_456369 None    Q7QK, L10I, I13V, I15V, G17E, K20I, M36I, P39LV, L63P, H69Q, L89I  
ES02_47595 ES02_47595 None    I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M  
ES02_487236 ES02_487236 None    L10V, T12TI, I13V, G16E, E35D, M36I, R41K, H69K, L89M  
ES02_50819 ES02_50819 None    T12TA, I13V, K20I, M36I, R41K, R57K, H69K, T74A, L89M  
ES02_519941 ES02_519941 None    T12V, I13V, K14R, K20I, M36I, R41K, L63S, H69K, L89M  
ES02_523931 ES02_523931 None    Q7QE, I13V, G16E, K20I, E35D, M36L, R41K, L63H, I64M, H69K, K70R, V82I, L89M  
ES02_536179 ES02_536179 None    L10LV, V11VI, T12TK, I13V, K14KR, I15IV, K20I, M36I, N37NS, R41K, H69K, K70KR, L89M  
ES02_566306 ES02_566306 None    I13V, K14R, G16GE, K20I, M36I, R41K, H69K, K70KR, L89M  
ES02_575234 ES02_575234 None    I13V, K14R, L19P, K20I, E35D, M36I, R41K, L63P, H69K, L89M  
ES02_58957 ES02_58957 None    T12A, I13V, K20I, M36I, R41K, K43KR, H69K, I72T, L89M  
ES02_594021 ES02_594021 None    I13V, G16E, K20I, E35D, M36I, N37D, L63P, I64IL, H69K, K70R, L89M  
ES02_648039 ES02_648039 None    P9X, I13V, K20I, M36I, R41K, L63PT, G68D, H69R, K70R, L89M  
ES02_67250 ES02_67250 None    I13V, K14R, G16GE, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
ES02_69608 ES02_69608 None    L10V, I13V, K14R, G16E, L19I, K20I, M36I, R41K, Q61H, L63CR, H69K, K70E, I72IT, P79D, L89M  
ES02_69917 ES02_69917 None    I13A, K14R, K20I, E35D, M36I, L38I, R41K, H69K, L89M  
ES02_706116 ES02_706116 None  V82A  I13V, K14R, K20I, M36I, R41K, I64M, H69K, L89M  
ES02_70975 ES02_70975 None    I13V, L19P, K20I, E35D, M36I, R41K, Q61H, I64L, H69K, L89M  
ES02_719600 ES02_719600 None    I13V, K14R, I15V, G16E, K20I, E35N, M36I, R41K, H69K, I72IM, L89M  
ES02_722191 ES02_722191 None    L10I, I13V, G16E, K20I, M36I, R41K, L63S, H69K, K70R, L89M  
ES02_737683 ES02_737683 None    L10V, T12K, I13V, I15V, K20I, M36I, R41K, I64V, C67Y, H69K, V82I, L89M  
ES02_769459 ES02_769459 None    I13A, K20I, E35D, M36I, R41K, I64L, H69K, L89M R87E 
ES02_803316 ES02_803316 None    T12P, K20I, E35K, M36I, N37D, R41K, H69K, K70R, L89M  
ES02_807340 ES02_807340 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M L10L* 
ES02_810986 ES02_810986 None    I13V, K14R, G16E, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
ES02_82281 ES02_82281 None    I13V, K20I, M36I, R41K, I64M, H69K, L89M  
ES02_850531 ES02_850531 None    I13V, K14R, K20I, M36I, R41K, H69K, K70R, L89M  
ES02_862326 ES02_862326 None   M46V I13V, K14R, G17E, K20I, M36I, N37D, R41K, K43KR, H69K, I72IM, L89M  
ES02_872855 ES02_872855 None    I13V, G16E, K20I, M36I, N37D, R41K, L63F, H69K, I72R, L89M K70G 
ES02_878285 ES02_878285 None    I13V, K14R, G16E, K20I, E35D, M36I, N37D, I64M, H69K, I72V, L89M  
ES02_88743 ES02_88743 None    I13V, K14R, K20I, M36I, R41K, I64IM, H69K, L89M  
ES02_897359 ES02_897359 None    L10I, I13V, K14R, G17E, K20I, E35D, M36I, R41K, L63V, I64M, H69K, L89M  
ES02_920404 ES02_920404 None    I13V, L19P, K20I, M36I, R41K, H69K, I72IM, L89M  
ES02_932651 ES02_932651 None    I13V, L19P, K20I, M36I, N37NS, R41K, H69K, L89M  
ES02_972321 ES02_972321 None    I13V, K14R, G17E, K20I, E35N, M36L, N37D, R41RK, H69K, K70R, L89M  
FEHE750917F FEHE750917F None    I13V, G16E, K20I, M36I, R41K, H69K, K70R, L89M  
GAVA670727M GAVA670727M None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
GOGA910521F GOGA910521F None    I13V, K14R, K20I, E35N, M36I, R41N, H69K, K70R, V77VI, L89M P9PLR 
GOVA660512M GOVA660512M None    I13V, K20I, M36I, R41K, L63P, I64L, H69K, L89M  
GOVI800521M GOVI800521M None    W6G, T12I, I13V, K14R, K20I, M36I, R41K, L63S, H69K, L89M  
GUGU640313F GUGU640313F None    I13V, K14R, I15V, K20I, E35N, M36I, R41N, H69K, K70R, V77I, L89M  
GUUC831224F GUUC831224F None    I13V, K14R, G17E, K20I, E35D, M36I, L63S, H69K, L89M, I93IL  
ITAZ810101F ITAZ810101F None    I13V, K14R, L19LP, K20I, M36I, R41K, H69K, L89M  
JILO700212M JILO700212M None    I13V, K14R, K20I, M36I, R41K, L63S, H69K, K70KR, L89M  
JOMU810131M JOMU810131M None    T12I, I13V, K14R, K20I, M36I, R41K, L63S, H69K, L89M  
KUXX780605M KUXX780605M None    I13V, K14R, K20I, M36I, R41K, L63P, H69K, I72IM, L89M K70GR 
LAMA750105M LAMA750105M None    I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, L63S, E65D, H69K, L89M  
MABO770707F MABO770707F None    I13V, L19LP, K20IM, M36I, N37GS, R41K, H69X, L89M  
MAMA770302F MAMA770302F None   L10F I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
MAXX800117M MAXX800117M None  V82VA  I13V, K14R, G16E, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
MBXX870315M MBXX870315M None    I13V, K14R, K20I, E35N, M36I, R41N, H69KR, K70R, V77I, L89M  
MOCA741121M MOCA741121M None    I13V, K14R, K20I, E35EG, M36I, P39PL, R41K, H69K, L89M  
NDAB580427M NDAB580427M None    L10I, I13V, K14KR, G16E, K20I, M36I, R41K, K43X, H69Q, L89M  
NDXX780209F NDXX780209F None    I13V, I15L, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
NUGU600131F NUGU600131F None    L10V, I13V, K14R, I15IV, L19P, K20I, E35D, M36I, N37D, R41K, L63P, I64L, H69K, L89M  
OHXX760616F OHXX760616F None    V11I, T12K, I13V, K14R, K20I, M36I, R41K, L63LP, H69K, L89M  
ONOB790924M ONOB790924M None    I13V, K14R, G16E, K20I, M36I, R57RK, L63P, H69K, L89M  
ONON820517M ONON820517M None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43KR, L63P, H69K, K70KR, I72IV, L89M  
PAAT531106F PAAT531106F None    I13V, G16E, L19V, K20I, M36I, N37D, R41K, H69K, L89M Q18T 
PEFE510415F PEFE510415F None    T4TS, I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, L89M  
RAMA770729M RAMA770729M None    L5LF, I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63X, I64L, E65ED, H69KN, K70R, L89M K55KI, V56VL 
RARU551218F RARU551218F None    I13A, K14R, K20I, M36I, R41K, H69K, V82VI, L89M  
ROBA621127M ROBA621127M None    I13V, I15S, G16R, Q18QK, K20I, M36I, R41K, L63P, H69K, L89M  
ROGA800626M ROGA800626M None    T12TI, I13V, K14R, G17E, K20I, E35D, M36I, L63S, H69K, L89M  
SAMO830603M SAMO830603M None    T12I, I13V, K14R, L19S, K20I, M36I, R41K, L63S, H69K, L89M  
SEMA801117F SEMA801117F None    I13V, K14R, L19P, K20I, M36I, R41K, I62IT, H69K, K70R, L89M  
SUES750606M SUES750606M None    I13A, G17E, K20I, M36I, R41K, H69K, I72V, L89M  
VADE800828M VADE800828M None    I13V, K14R, L19P, K20I, M36I, N37D, R41K, H69K, K70R, L89M