Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Avi (2014)
Title Full-length genome sequences of Estonian HIV-1 CRF06 and Eastern-European subtype A1 recombinant forms.
Citation BMC Infect Dis
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 10
NumPts 10
Subtype CRF06_cpx, CRF02_AG

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
41 41 Unknown    E11D, K14R, R20K, S24N, V31I, L74I, L101I, T112V, T124A, G134N, K136T, R187K, V201I, T206S, T218I, L234I, D256E, D279G  
69 69 Unknown    E11D, K14R, S24N, V31I, I72V, L74I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T206S, T218I, L234V, D256E  
A12 A12 Unknown    S17N, R20K, V31I, E35K, L45Q, L63I, I72T, L74I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, T218I, L234I, D256E, D278N, S283G  
A13 A13 Unknown    S17N, R20K, V31I, L74I, L101I, T112V, T125A, G134N, K136T, V201I, T206S, T218I, L234I, D256E, S283G  
A14 A14 Unknown    K14R, S24N, V31I, L45Q, L63I, L74I, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, K211R, T218I, L234I, S255N, D270E, S283G, D286N  
A19 A19 Unknown    E11D, S24N, V31I, L63I, L74I, L101I, T112V, I113V, S119P, T124S, T125A, G134N, K136T, D167E, V201I, T206S, L234I, S255N  
A21 A21 Unknown    S17N, V31I, L63I, L74I, L101I, T112V, T122I, T124A, T125A, G134N, K136T, V201I, T206S, T218I, L234I  
A45 A45 Unknown    A23V, L45Q, L63I, L74I, L101I, T112V, T125A, G134N, K136T, R187K, V201I, T206S, T218I, L234I, D256E, V281M, D288N  
A48 A48 Unknown    K14R, V32I, S57G, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, I204L, T206S, T218I, L234I, D278E, S283D, D286N  
A49 A49 Unknown    S17N, S24N, V31I, L63I, L74I, L101I, T112A, T124A, T125A, G134N, I135V, K136T, K188R, V201I, T206S, T218I, L234I, S255N