Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Omooja (2019)
Title Rates of HIV-1 virological suppression and patterns of acquired drug resistance among fisherfolk on first-line antiretroviral therapy in Uganda.
Citation J Antimicrob Chemother
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 97
NumPts 97
Subtype A, D, C, G, B


Clinical PR Isolates

V18_08_201 V18_08_201 None    I13V, K20R, M36I, R41K, R57K, L63C, I64V, H69K, K70R  
V18_08_202 V18_08_202 None    I13V, I15V, G16E, M36L, N37NS, R41K, R57K, I62V, L63H, I64V, E65ED E35D_TN 
V18_08_203 V18_08_203 None    I13V, E35D, M36I, R41K, R57K, I62IV, L63LP, H69K, L89M  
V18_08_204 V18_08_204 None    I13V, K14R, R41K, I64V, H69Y  
V18_08_205 V18_08_205 None    I13V, I15V, K20R, E35D, M36I, N37D, R41K, K43R, R57K, H69K, L89M  
V18_08_206 V18_08_206 None    I13V, G17D, E35D, M36I, N37D, R57K, H69K, L89M  
V18_08_207 V18_08_207 None    I13V, E35D, M36I, R41K, H69K, L89M  
V18_08_208 V18_08_208 None    I13V, E35D, M36I, R41K, H69K, L89M  
V18_08_209 V18_08_209 None    I13V, K14KR, M36I, R41K, I64V  
V18_08_210 V18_08_210 None    L10I, I13V, M36I, R41K, L63P, H69KQ, L89M  
V18_08_211 V18_08_211 None    I13V, E35D, M36I, R41K, R57K, H69K, K70R, L89M  
V18_08_212 V18_08_212 None    L10V, T12K, I13V, K14R, L19Q, L33V, R41K, K43R, L63Q, I64V, V77I  
V18_08_213 V18_08_213 None    I13V, K14R, I15V, M36I, N37D, R41K, D60E, I62V, I64V, T74TA  
V18_08_214 V18_08_214 None    K14KR, M36I, R41K, L63T, I64V, I72T  
V18_08_215 V18_08_215 None    L10LI, I13V, R41K, L63Q, I64V, V77I  
V18_08_216 V18_08_216 None    L10V, I13V, K14R, I15V, G16E, K20R, E21D, E35D, M36I, R41K, K43R, R57K, L63T, H69K  
V18_08_217 V18_08_217 None    I13V, I15V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
V18_08_218 V18_08_218 None    T12TS, I13IV, L19I, R41K, L63S, I64V, E65D, V77I  
V18_08_219 V18_08_219 None    I13V, K14R, I15V, E35D, M36I, R41K, R57K, D60E, I62V, L63P, H69K, L89M  
V18_08_220 V18_08_220 None    L10LI, K20R, E35D, M36I, N37D, R57RK, L63S, H69K, L89M  
V18_08_221 V18_08_221 None    L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63T, H69K, I72IM, L89M  
V18_08_223 V18_08_223 None    I13V, G16E, E35D, R41K, I62V, L63P  
V18_08_224 V18_08_224 None    I13V, E35D, M36I, R41K, K45R, H69K, L89M  
V18_08_225 V18_08_225 None    I13V, M36I, R41K, I62V, L63H, I64V  
V18_08_226 V18_08_226 None    I13V, L33LV, R41K, L63LP, I64V, H69Y, I72V  
V18_08_227 V18_08_227 None    L10V, I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M  
V18_08_228 V18_08_228 None    L10I, I13V, R41K, L63N, I64V, H69Y, I72V, V77I, I93L  
V18_08_229 V18_08_229 None    L19I, E35D, M36I, R41K, L63LP, I64V  
V18_08_230 V18_08_230 None    I13V, K20R, M36I, R41K, I64V, I72V  
V18_08_231 V18_08_231 None    L10I, I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
V18_08_232 V18_08_232 None    I13V, E35D, R41K, K43R, D60E, L63P, I64V, H69Y, V77I  
V18_08_233 V18_08_233 None    I13V, K14R, K20I, E35N, M36I, R41K, L63X, H69K, L89M  
V18_08_234 V18_08_234 None    L10V, I13V, K14KR, G16E, K20R, E35D, M36I, N37ND, R41K, K45R, R57K, I62IV, L63S, I64V, H69K, L89M  
V18_08_235 V18_08_235 None    T12TP, I13V, G16E, L19LV, E35D, M36I, P39T, R41K, R57K, I62V, L63S, H69K, L89M  
V18_08_236 V18_08_236 None    M36I, R41K, D60E, I62V, L63P, I64V  
V18_08_237 V18_08_237 None    I13V, M36I, P39S, R41K, Q61N, L63S, I64V, E65D  
V18_08_238 V18_08_238 None    I13V, K14R, G17E, E35D, M36I, R41K, K45R, R57K, L63LP, H69K, L89M  
V18_08_239 V18_08_239 None    I13V, K14R, I15IV, K20R, E35D, M36I, N37D, R41K, R57K, H69K, L89M  
V18_08_240 V18_08_240 None    I13V, K20R, M36I, R41K, R57K, I64V, I72V  
V18_09_001 V18_09_001 None    L10M, T12S, L19I, M36I, R41K, L63V, H69Q, I72IV, L89M, I93L  
V18_09_002 V18_09_002 None    T12S, I15V, L19I, M36I, N37K, R41N, I62V, L63I, H69K, T74TS, V82I, L89M, I93L  
V18_09_003 V18_09_003 None    I13V, I15V, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
V18_09_004 V18_09_004 None    I13V, E35D, M36I, R41K, H69K, L89M  
V18_09_005 V18_09_005 None    I13V, M36I, R41K, I64V, I72V  
V18_09_006 V18_09_006 None    E35D, M36I, R41K, L63LH, I64IV, H69X, L89LM  
V18_09_007 V18_09_007 None    I13V, G17E, M36I, R41K, D60E, I62V, L63P, L89M  
V18_09_008 V18_09_008 None    I13V, E35D, M36I, N37D, R41K, L63S, H69K, L89M  
V18_09_009 V18_09_009 None    I13V, E35D, M36I, N37D, R41RK, R57RK, H69R, L89M  
V18_09_010 V18_09_010 None    L10LI, I13V, L19LI, E35D, M36I, R41K, K45KR, R57K, I62IV, C67CY, H69K, L89M  
V18_09_011 V18_09_011 None    I13V, N37A, R41K, R57RK, D60DE, I62IV, L63EQ, I64V, E65D, H69HY, I72T, V77I  
V18_09_012 V18_09_012 None    L10LV, L19I, E35D, M36I, R41K, R57K, H69K, L89M  
V18_09_013 V18_09_013 None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
V18_09_014 V18_09_014 None    I13V, K14R, L33V, M36I, R41K, I64V, E65D  
V18_09_015 V18_09_015 None    K14KR, I15V, M36I, R41K, D60E, I64V, H69Q  
V18_09_016 V18_09_016 None    L10V, I13V, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M  
V18_09_017 V18_09_017 None    N37C, L63Q, I64V, E65D, V77I  
V18_09_018 V18_09_018 None    I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
V18_09_019 V18_09_019 None    L10V, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63T, H69K, I72M, L89M  
V18_09_020 V18_09_020 None    I13V, K20R, M36I, R41K, R57K, L63P, H69K, L89M  
V18_09_021 V18_09_021 None    K14KR, I15V, M36I, N37D, R41K, L63T  
V18_09_022 V18_09_022 None    I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M  
V18_09_023 V18_09_023 None    I13V, I15V, K20R, E35D, M36I, R41K, R57K, L63A, H69K, L89M  
V18_09_024 V18_09_024 None    T12P, I13V, K14R, K20R, M36I, R41K, Q61E, I64V, K70R  
V18_10_001 V18_10_001 None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
V18_10_002 V18_10_002 None    I13V, G16A, E35D, M36I, R41K, R57K, D60E, H69K, L89M  
V18_10_003 V18_10_003 None    I13V, K14R, E35D, M36I, R41K, K45R, L63S, H69K, L89M  
V18_10_004 V18_10_004 None    L10IV, I13V, K14R, G16E, E35D, M36I, R41K, L63T, H69K, K70R, L89M  
V18_10_005 V18_10_005 None    I13V, R41K, R57K, D60E, L63P, I64V, V77I  
V18_10_006 V18_10_006 None    I13V, I15V, E35D, M36I, R41K, Q61E, L63M, I64IL, H69K, L89M  
V18_10_007 V18_10_007 None    I13V, R41K, L63P, I64V, H69Y, I72V, V77I  
V18_10_008 V18_10_008 None    I13V, R41K, L63P, I64V  
V18_10_009 V18_10_009 None    T12TA, I13V, I15V, M36I, N37D, R41K, L63T, I64V, I72V  
V18_10_010 V18_10_010 None    L10I, E35D, M36I, R41K, L63PT, H69Q, L89M, I93L  
V18_10_011 V18_10_011 None    L10V, I13V, G16E, E35D, M36I, R41K, I62V, L63S, I64V, E65D  
V18_10_012 V18_10_012 None    I13V, K14N, E35D, M36I, R41K, K45R, R57RK, L63P, I64V, I72V  
V18_10_013 V18_10_013 None    I13V, K14R, I15V, K20R, E35D, M36I, N37E, R41K, R57K, H69K, L89M  
V18_10_014 V18_10_014 None    I13V, K14R, K20KR, M36I, R41K, L63LP, I64V  
V18_10_015 V18_10_015 None    I13V, I15IV, G16GE, M36I, R41K, I62IV, L63X, I64V, E65ED, H69HY  
V18_10_016 V18_10_016 None    I13V, K14R, K20R, M36I, R41K, Q61E, I64V, K70R  
V18_10_017 V18_10_017 None    L10LI, I13V, E35D, M36I, R41RK, K43R, R57K, Q61H, L63S, H69K, L89M  
V18_10_018 V18_10_018 None    I13V, G16A, E35D, M36I, R41K, R57K, I62V, C67W, H69K, K70R, L89M  
V18_10_019 V18_10_019 None    I13V, G16E, K20I, E35N, M36I, R41K, H69K, V77I, L89M  
V18_10_020 V18_10_020 None    I13V, K20R, M36I, R41K, I62V, L63A, I64V  
V18_10_021 V18_10_021 None    G16E, K20M, E35D, M36I, R41K  
V18_10_022 V18_10_022 None    I13V, K20R, M36I, R41K, I62V, L63A, I64V, H69Y, I72V  
V18_10_023 V18_10_023 None    L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
V18_10_024 V18_10_024 None    I13V, E35D, M36I, N37D, R41K, R57K, I64L, H69R, L89M  
V18_10_025 V18_10_025 None    I13V, R41K, I64V, H69Y, V77I  
V18_11_037 V18_11_037 None    I13V, K14R, K20R, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M  
V18_11_038 V18_11_038 None    I13V, G16E, E35D, M36I, P39S, K45R, R57K, L63H, H69K, L89M  
V18_11_039 V18_11_039 None    I13V, E35D, M36I, R41K, R57K, D60E, H69K, L89M  
V18_11_040 V18_11_040 None    L10V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, R57K, L63T, H69K, K70R, L89M  
V18_11_041 V18_11_041 None    M36I, P39PS, R41K, D60E, L63P, I64V, I72V  
V18_11_042 V18_11_042 None    I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
V18_11_043 V18_11_043 None    I13V, I15V, E35D, M36I, R41K, K45KR, R57K, H69K, L89M  
V18_11_044 V18_11_044 None    L10I, I13V, E35D, M36I, R41K, R57K, H69K, L89M  
V18_11_045 V18_11_045 None    I13V, K14KR, M36I, R41K, Q61N, L63P, I72T