Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Nesakumar (2019)
Title Transmitted HIV-1 Drug Resistance in a Treatment-Naive Cohort of Recently Infected Individuals from Chennai, India.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 47
NumPts 47
Subtype C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
NAB002 NAB002 None None   V35T, E36A, T39D, S48T, V60I, K101KR, D121Y, K122E, I135IT, S162A, T165TI, K173AT, D177E, T200A, Q207E, R211RK, V245Q  
NAB003 NAB003 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, D123E, I135T, S162H, T165I, K166R, K173A, D177E, Q197K, T200A, Q207E, R211K, V245Q  
NAB005 NAB005 None None   K32E, V35K, E36A, T39D, S48T, V60I, D121Y, K122E, I135R, K173A, D177E, V179I, T200A, Q207E, V245Q  
NAB006 NAB006 None None   V35T, E36EA, T39D, S48T, V60I, D121HY, K122E, D123DE, I135R, K173A, Q174QK, D177E, T200A, Q207E, V245Q  
NAB007 NAB007 None None  K101E V35T, E36A, T39D, S48T, V60I, D121Y, K122E, S162N, K166R, K173IT, D177E, T200A, E204EK, Q207E, R211K, V245Q  
NAB009 NAB009 None None   K20R, T27P, V35T, E36A, T39D, V60I, T69TS, D121HY, K122E, I135R, S162A, K173A, D177E, T200A, Q207E, V245Q  
NAB011 NAB011 None None   V35T, E36A, T39DE, S48T, V60I, D121Y, K122E, I135T, S162A, K173A, D177E, Q197K, T200A, Q207E, R211G, V245K  
NAB0118 NAB0118 None None   V35M, E36A, T39D, S48T, V60I, D121Y, K122E, I135V, E169EK, K173L, Q174K, D177E, T200A, Q207E, R211K, V245Q  
NAB012 NAB012 None None   V35T, E36EA, T39DN, S48T, V60I, D121Y, K122E, I135RT, S162A, K173AT, D177E, T200AEV, Q207E, R211K, V245Q  
NAB014 NAB014 None None   K32KE, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135R, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, R211K, V245Q  
NAB018 NAB018 None None   V8I, V35T, E36A, T39E, S48T, V60I, R83K, D121Y, K122E, I135T, K173I, Q174K, D177E, T200A, Q207E, R211K, V245Q  
NAB021 NAB021 None None   T27S, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, S162Y, K166KR, K173T, D177E, T200A, Q207E, R211RK, V245Q  
NAB022 NAB022 None None   V35T, T39DN, S48T, V60I, K122E, I135T, S162H, K166R, K173T, Q174R, D177E, T200A, Q207E, R211K, V245Q  
NAB025 NAB025 None None   V35T, E36A, T39D, S48T, V60I, D121H, K122E, I135V, I142V, T165TI, K173A, D177E, I178L, Q197QK, T200A, Q207AG, R211K, V245Q K32A 
NAB026 NAB026 None None   V35T, E36A, T39D, S48T, V60I, D123E, I135V, S162A, K173A, Q174R, D177E, T200A, Q207E, R211K, V245Q  
NAB027 NAB027 None None   V35T, E36A, T39D, S48T, V60I, K122P, K173AT, D177E, I178L, T200A, E204K, Q207D, R211RK, E248ED  
NAB028 NAB028 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, S162A, K166KR, K173A, D177E, T200A, Q207E, V245Q  
NAB029 NAB029 None None   V35KT, T39D, S48T, V60I, D121H, K122E, K173A, D177E, T200A, Q207E, R211K, V245Q  
NAB030 NAB030 None None   V35T, E36A, T39E, S48T, V60I, D121Y, K122E, K166KR, K173A, D177E, T200A, I202IV, Q207E, V245Q I135GR 
NAB031 NAB031 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135V, A158AS, I159IV, S162A, K173AT, D177E, T200A, Q207EG, R211RK, D237N, V245Q  
NAB032 NAB032 None None   V35M, E36A, T39D, S48T, V60I, D121Y, K122E, A158AS, K173A, D177E, T200A, Q207G, V245Q  
NAB034 NAB034 None None   V35T, E36EA, T39D, S48T, V60I, K122KE, K166R, K173A, D177E, T200A, Q207E, R211RK, V245Q Y183YDH 
NAB037 NAB037 None None   V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135T, T165I, K173A, Q174R, D177E, I178L, T200V, Q207E, R211K, F214L, V245Q  
NAB038 NAB038 None None   V35T, E36A, T39D, S48T, E53ED, V60I, D121Y, K122E, I135IT, S162A, K173A, D177E, T200A, Q207E, R211K, V245Q  
NAB041 NAB041 None None   K11KT, V35T, T39E, S48T, D121H, K122E, I135IR, S162SC, T165TI, K173A, D177E, T200A, I202IV, Q207DE, V245X  
NAB042 NAB042 None None   K20R, V35T, E36A, T39D, S48T, V60I, K82R, W88S, D121Y, K122E, D123E, I135R, S162H, K166R, K173A, Q174R, D177E, T200A, Q207E, R211K, F214L, V245Q  
NAB043 NAB043 None None  K101KE, V179VD V8I, K20R, V35T, E36A, T39D, V60I, K102KQ, K104KR, D121DY, K122E, I135X, K166KR, K173AV, Q174KR, D177E, Q197LP, T200A, Q207E, V245Q  
NAB044 NAB044 None None   T27S, V35T, E36A, T39D, S48T, V60I, K102Q, D121Y, K122E, I135T, S162Y, T165I, K166R, K173I, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q  
NAB045 NAB045 None None   V35T, E36EA, T39E, S48T, V60I, D121Y, K122E, I135T, S162C, K173T, Q174K, D177E, I178L, T200E, Q207E, R211K, V245Q  
NAB047 NAB047 None None  E138A V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135T, S162C, K173A, D177E, T200A, Q207E, R211K, V245Q  
NAB050 NAB050 None None   V8I, K20R, V35T, T39DN, K49R, V60I, K101KQ, D121Y, K122E, I135K, S162C, K166KR, K173A, D177E, T200L, R211K, V245Q  
NAB053 NAB053 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, S162A, K173A, Q197L, T200A, Q207D, R211K, V245Q  
NAB055 NAB055 None None   V35T, E36EA, T39DE, S48T, V60I, D121HY, K122E, K166R, K173AT, D177E, I178IM, T200A, E204EK, Q207A, R211K, V245Q  
NAB057 NAB057 None None  E138A V35T, T39N, S48T, E53D, V60I, K104R, V118VI, D121Y, K122E, S162A, K173E, V179VI, Q197K, T200A, Q207E, R211K, F214L, V245H  
NAB058 NAB058 None None   V35T, E36EA, T39DN, S48T, V60I, D121H, K122E, I135R, K166KR, K173A, D177E, I178M, T200A, Q207E, R211K, V245Q  
NAB064 NAB064 None None   K32E, V35T, E36A, T39N, S48T, V60I, D121Y, K122E, I135R, S162A, K173A, D177E, T200A, Q207E, V245Q  
NAB067 NAB067 None None  Y188YC V35T, E36EA, T39D, S48T, V60I, K173EG, Q174K, I178L, T200A, Q207EK, R211K, V245Q  
NAB068 NAB068 None None   V35T, E36A, T39E, S48T, V60I, K102Q, D121Y, K122E, I135V, K166KR, E169D, K173A, D177E, T200A, Q207GV, R211K, V245Q  
NAB070 NAB070 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135R, S162A, K173A, D177E, T200E, E204K, V245Q  
NAB076 NAB076 None None   K32Q, V35T, E36A, T39E, S48T, V60I, K122E, D123S, I135R, K173A, D177E, T200A, Q207E, V245Q  
NAB077 NAB077 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, S162A, K173T, D177EG, T200A, Q207G, V245Q  
NAB078 NAB078 None None   V35T, T39E, S48T, E53ED, V60I, K122E, D123S, I135R, S162A, K173T, D177E, T200A, Q207E, V245Q  
NAB080 NAB080 None None   K32E, V35T, E36A, T39E, S48T, V60I, D121H, K122E, D123E, I135R, K166R, K173A, Q174E, D177E, T200A, I202IV, Q207A, V245Q  
NAB081 NAB081 None None   K20R, V35T, T39E, S48ST, V60I, D121Y, K122E, I135K, S162H, K166R, K173A, D177E, T200L, Q207E, V245H  
NAB082 NAB082 None None   K20R, V35T, E36EK, T39E, S48T, I50IV, V60I, D121Y, K122E, I135K, S162H, K166R, K173A, D177E, G196K, Q197E, T200A, Q207E, R211RK, V245H  
NAB083 NAB083 None None   V8I, V35T, E36A, T39E, S48T, V60I, D121Y, K122E, D123E, I135T, K173T, Q174R, D177E, T200A, Q207E, R211K, V245Q  
NAB084 NAB084 None None   V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135V, S162A, K173S, D177E, T200A, Q207E, R211K, V245Q