Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Barabona (2019)
Title Pre-treatment and acquired HIV drug resistance in Dar es Salaam, Tanzania in the era of tenofovir and routine viral load monitoring.
Citation J Antimicrob Chemother
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 159
NumPts 159
Subtype A, C, D, B, CRF10_CD, CRF35_AD, CRF02_AG

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 159 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
V24_PRRT V24_PRRT None    M36I, R41K, H69K, L89M, I93L  
V25_PRRT V25_PRRT None    L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63V, H69R, I72V, L89M  
V26_PRRT V26_PRRT None    I13V, K14R, K20R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
V27_PRRT V27_PRRT None    I15V, G16A, M36I, N37K, R41N, K45R, H69K, I93L  
V35_PRRT V35_PRRT None    L10V, L19T, M36I, R41K, H69K, L89M, I93L  
V36_PRRT V36_PRRT None    I15V, L19I, M36I, R41K, Y59F, L63P, H69K, I93L  
V37_PRRT V37_PRRT None    M36MI, R41K, I62V, L63A, H69K, A71T  
V38_PRRT V38_PRRT None    I13V, Q18R, R41K, I62V, L63A, H69K, A71T  
V39_PRRT V39_PRRT Unknown      
V40_PRRT V40_PRRT None    L5LI, I13V, E35D, M36I, R41K, K45R, L63T, H69K, L89M A22AD, W42W* 
V43_PRRT V43_PRRT None    T12PS, I15V, L19T, M36I, R41K, Q61E, L63P, H69K, T74A, L89M, I93L  
V44_PRRT V44_PRRT None    P1PL, T4TI, L5LI, I13V, G17E, L23LV, E35D, M36I, L38LF, R41K, K43KN, K45R, L63A, H69R, L89M A22AD 
V45_PRRT V45_PRRT None    T12PS, I15V, L19T, M36I, R41K, Q61E, L63P, H69K, T74A, L89M, I93L  
V46_PRRT V46_PRRT None    E35D, M36I, R41K, H69K, L89M W6W* 
V47_PRRT V47_PRRT None    L10V, I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
V48_PRRT V48_PRRT None    I13V, L19I, E35D, M36I, R41K, R57K, L63P, H69K, I72M, L89M  
V49_PRRT V49_PRRT None    I15V, L19IV, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M  
V50_PRRT V50_PRRT None    T12S, I15V, G16A, L19V, E35D, M36I, N37E, R41K, R57K, D60E, H69K, L89M, I93L G40G* 
V51_PRRT V51_PRRT None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
V52_PRRT V52_PRRT None    I13IV, K14R, L33V, M36MI, R41K, R57RK, I64V  
V53_PRRT V53_PRRT None    T12S, I15V, L19I, E35D, M36I, R41K, D60E, Q61E, L63P, I64IM, H69K, L89M, I93L  
V54_PRRT V54_PRRT None    I13V, E35D, M36L, N37D, R41K, L63Q, V75I  
V55_PRRT V55_PRRT None    I13V, G16A, L19I, E35D, M36I, R41K, K45R, K55KR, R57K, H69K, L89M  
V56_PRRT V56_PRRT None    K14R, E35D, M36I, P39T, R41K, R57K, I62V, L63T, H69K, K70R, L89M  
V58_PRRT V58_PRRT None    K14R, I15V, L19V, M36I, N37K, R41N, H69K, L89M, I93L  
V59_PRRT V59_PRRT None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
V60_PRRT V60_PRRT None    I13V, I15IV, K20R, E35D, M36I, R41K, R57K, L63V, H69K, V82I, L89M  
X100_PRRT X100_PRRT None    T12S, I15V, L19V, K20KR, N37K, R41N, I62V, L63P, H69K, T74S, V77I, V82I, L89M, I93L  
X102_PRRT X102_PRRT None    L10I, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69Q, K70R, I72V, L89M  
X104_PRRT X104_PRRT None    L10I, I13V, I15IV, G16E, E35D, M36I, R41K, L63T, H69Q, L89M  
X105_PRRT X105_PRRT None    I13V, M36I, R41K, L63V, I64V, H69K  
X106_PRRT X106_PRRT None    I13V, K14KR, I15V, E35D, M36I, R41K, K43KR, R57K, D60DE, L63X, H69K, L89M  
X109_PRRT X109_PRRT None    I13V, K14R, I15V, E35D, M36I, R41K, R57K, L63T, I64V, H69K  
X110_PRRT X110_PRRT None    I13V, E35D, M36I, K45R, R57K, L63P, H69K, L89M  
X111_PRRT X111_PRRT PI    L10V, T12S, I15V, G16E, L19T, M36I, R41K, K45R, L63H, H69K, L89M, I93L  
X114_PRRT X114_PRRT PI  M46I, I84V, L90M L10F, F53L, N88D, L89V V11L, I13V, K14R, K20I, L33I, E35N, M36I, N37D, R41K, K45R, K55R, R57K, Y59F, Q61E, L63P, H69K, A71V, T74K, T91S  
X115_PRRT X115_PRRT None    L5LF, T12S, I15V, L19T, M36I, R41K, I62V, L63S, I64V, H69HR, I72IT, I93L  
X116_PRRT X116_PRRT None    L10V, I13V, K14KR, G16E, E35D, M36I, R41K, R57K, H69K, L89M  
X117_PRRT X117_PRRT None    I13V, G16E, K20R, E35D, M36I, P39PS, R41K, K45R, R57K, H69K, I72IV, L89M  
X119_PRRT X119_PRRT PI    T12S, L19I, M36I, R41RK, K45R, L63PS, H69K, L89M, I93L  
X120_PRRT X120_PRRT None    T12S, I15V, L19V, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
X121_PRRT X121_PRRT None    I13V, K14R, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
X122_PRRT X122_PRRT None    T12TS, L19T, M36I, R41K, Q61H, L63S, H69K, I93L  
X123_PRRT X123_PRRT PI    I13IV, K20R, E35D, M36I, R41K, K43KR, R57K, L63P, E65D, H69K, K70R, L89M  
X126_PRRT X126_PRRT None    R8RG, L10V, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70KR, I72V, L89M  
X128_PRRT X128_PRRT None    L10I, I13V, G16E, L19I, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89M  
X129_PRRT X129_PRRT None    T12S, I15V, G16E, L19V, M36I, L63C, H69K, V82VI, L89LM, I93L  
X131_PRRT X131_PRRT None    T12S, L19I, K20R, M36I, R41K, R57K, L63S, H69K  
X132_PRRT X132_PRRT None    I13V, G16E, M36I, R41K, Q58QK, L63A, H69K, L89M  
X133_PRRT X133_PRRT None    I13V, E35D, M36I, R41K, R57K, I62IV, L63V, I64M, H69K, L89M  
X134_PRRT X134_PRRT PI    L10I, I13V, K14R, G16E, E35D, M36I, R41K, L63V, H69K, L89M G40GV 
X138_PRRT X138_PRRT None    K14KR, E35D, M36I, R41K, R57K, L63A, H69K, L89M  
X139_PRRT X139_PRRT None    T12S, I15V, L19V, M36I, R41K, L63P, H69K, V82I, I93L  
X140_PRRT X140_PRRT None    E35D, M36I, N37K, R41I, K45R, R57RK, L63P, H69K, L89M, I93L M46MR 
X142_PRRT X142_PRRT None    L10I, I13V, G16E, E35D, M36I, R41K, R57K, L63T, H69K, K70R, L89M  
X144_PRRT X144_PRRT None    L10I, I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63A, H69K, L89M  
X148_PRRT X148_PRRT None    T12S, L19V, M36I, R41K, D60E, Q61E, L63P, H69K, K70KR, L89M, I93L  
X149_PRRT X149_PRRT None    T12S, I15V, G16E, L19I, R41K, L63T, H69K, T74TA, V77I, L89M, I93L  
X150_PRRT X150_PRRT None    T4TI, L19T, M36I, L63Q, I64V  
X151_PRRT X151_PRRT None    I13V, K20I, E35D, M36I, R41K, R57K, H69K, K70R, T74S, L89M  
X152_PRRT X152_PRRT None    I13V, G16E, E35D, M36I, R41K, K45R, K55R, L63A, H69K, L89M  
X153_PRRT X153_PRRT None    L10I, I13V, G16E, L19Q, E35D, M36I, L63S, H69K, K70R, L89M  
X154_PRRT X154_PRRT None    P1PL, T4TI, L5LI, T12S, I15V, L19I, M36I, R41K, W42X, L63P, H69K, L89M, I93L  
X155_PRRT X155_PRRT None    G16E, P39S, I62V, L63P, H69K, A71T  
X156_PRRT X156_PRRT None    L10I, I13V, G16E, L19P, E35D, I62V, L63T, I64V, H69K, A71T, V77VI  
X158_PRRT X158_PRRT None    L10I, I13V, E35D, M36I, R41K, R57K, L63A, H69Q, L89M  
X160_PRRT X160_PRRT None    I13V, K14KR, K20KR, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M  
X161_PRRT X161_PRRT PI    K14R, I15V, L19T, M36I, N37D, R41K, R57K, L63A, H69K, I93L  
X163_PRRT X163_PRRT None    I13V, E35D, M36I, R41K, R57K, L63P, H69K, V77I, L89M  
X165_PRRT X165_PRRT PI    L10I, T12A, I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63S, H69K, L89M  
X167_PRRT X167_PRRT None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
X53_PRRT X53_PRRT None    P1PL, T4TI, L5LI, R8RQ, I13V, L19LQ, E35D, M36I, R41K, K45R, L63S, H69K, K70R, L89M A22AD, A28T, W42W* 
X55_PRRT X55_PRRT None    I13V, G16GE, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
X56_PRRT X56_PRRT None    P1PL, T4TI, L5LI, T12TA, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M P9PR, W42W* 
X58_PRRT X58_PRRT None    I15V, E35D, M36I, R41K, K45R, R57K, L63V, I64M, H69K, K70KR, L89M, I93L  
X59_PRRT X59_PRRT None    I15V, G16E, L19I, E35D, M36I, R41K, D60E, L63S, H69K, I93L  
X61_PRRT X61_PRRT None    T12S, I15V, L19T, K20R, M36I, N37D, R57K, H69K, I93L  
X62_PRRT X62_PRRT None    I13V, K14R, L19V, L33V, R41K, L63V, I64V, E65D, H69K  
X64_PRRT X64_PRRT None    I13V, K14R, M36I, R41K, D60E, I62V, L63P, I64V  
X66_PRRT X66_PRRT None    T12S, I15V, L19I, K20KR, E35D, M36I, R41K, D60DE, Q61QE, H69K, L89M, I93L  
X67_PRRT X67_PRRT None    L10V, I13V, G16E, G17D, E35D, M36I, K45R, R57K, L63S, H69K, L89M  
X68_PRRT X68_PRRT None    L10I, I13V, K14N, G16E, M36I, L63T, I64V, E65D, I72V  
X71_PRRT X71_PRRT PI  M46I, L76V, I84V L10FI, Q58E V11L, I13AV, L19LI, K20KR, A22AV, E35D, M36I, K55KR, R57K, I62V, L63P, H69KR, L89I, T91S  
X72_PRRT X72_PRRT None    L10LV, I13V, G16GE, E35D, M36I, R41K, K45R, L63T, H69K, L89M  
X73_PRRT X73_PRRT None    P1PL, T4TI, L5LI, L10I, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69Q, L89M A22AD, W42W* 
X75_PRRT X75_PRRT None    I15V, G16A, M36I, N37K, R41N, L63ST, H69K, I93L  
X76_PRRT X76_PRRT None    L10V, I13V, K14X, I15V, G16E, E35D, M36I, K45R, R57K, I62V, L63H, H69K, L89M  
X77_PRRT X77_PRRT None    I15IV, G16E, E35D, M36I, P39PS, R41K, K45R, R57K, L63T, H69K, I72IT, L89LM  
X80_PRRT X80_PRRT None    M36I, R41K, L63Q, I64V G48GW 
X81_PRRT X81_PRRT PI  M46I, L76V  L10V, T12S, I13V, I15V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M L19IKN 
X82_PRRT X82_PRRT None    T12S, I15V, L19I, M36I, N37K, R41N, L63T, H69K, I93L  
X83_PRRT X83_PRRT None    P1PL, T4TI, L5LI, I13V, L23LV, T31TA, E35D, M36I, L38X, P39PL, R41K, K45R, R57K, L63S, H69K, L89M P9PR, A22AD, D25DV, T26TA, D29DE, G40GA, W42WR, K43K* 
X85_PRRT X85_PRRT None    L10I, I13V, E35D, M36I, R57K, H69K, L89M  
X86_PRRT X86_PRRT None    I15V, L19T, K20R, M36I, P39T, R57K, D60E, L63P, H69K, L89M, I93L  
X87_PRRT X87_PRRT PI    P1PL, T4TI, L5LI, I13V, K20R, E35D, M36I, R41K, K45R, R57K, L63T, I64M, H69K, L89M W42W* 
X88_PRRT X88_PRRT None    T12S, I15V, L19I, M36I, R41K, L63H, H69K, I72V, L89M, I93L  
X92_PRRT X92_PRRT PI    I13V, R41K, L63P, H69Y, I72E  
X95_PRRT X95_PRRT None    L10V, I13V, K14R, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89M  
X97_PRRT X97_PRRT None    L10I, I13IV, G16A, E35D, M36I, R41K, R57K, H69K, L89M  
X99_PRRT X99_PRRT PI  M46I L23I L19V, E35D, M36I, N37D, R57K, L63Q, H69K, L89M  

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