Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Reynolds (2012)
Title Virologic versus immunologic monitoring and the rate of accumulated genotypic resistance to first-line antiretroviral drugs in Uganda.
Citation BMC Infect Dis
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 103
NumPts 103
Subtype A, D, C, B, CRF10_CD

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 103 Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
365950-P 365950-P NRTI NNRTI   E42G, K66X, K122E, D123DN, K173A, Q174K, D177E, V179I, T200TIM, Q207A, R211S, F214L, V245Q  
367009-B 367009-B NRTI NNRTI   K49R, V60I, K66X, D121Y, K122E, E169D, T200I, Q207E, R211K, V245K  
370420-B 370420-B NRTI NNRTI   K43X, V60I, K66X, D123S, K173L, Q174K, D177E, V179I, T200TA, I202V, Q207A, R211S, V245Q  
373400-Y 373400-Y NRTI NNRTI   K43X, V60I, K66X, D121Y, K122E, D123E, I135T, D177E, T200I, Q207E, R211K, I244V, V245T  
373652-R 373652-R NRTI NNRTI   V60I, K64R, K66X, K122E, D123NS, I135T, K173ST, Q174K, D177E, I178IM, V179I, R199RK, Q207E, R211RS, V245K L209LIM 
376859-E 376859-E NRTI NNRTI   K43X, K66X, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, T200A, Q207A, R211S, V245KQ  
378072-Y 378072-Y NRTI NNRTI   E40D, K43X, V60I, K66X, K122E, D123S, S134SR, I135T, S162A, K173L, Q174K, Q197QH, R199T, I202IV, Q207A, R211S, F214L, V245K  
378462-L 378462-L NRTI NNRTI   K43X, K49R, V60I, K66X, D123S, K173L, Q174K, D177E, V179I, E203Q, R206RK, Q207D, R211K, P243PH, I244V, V245E L209LI, D218HN 
381425-R 381425-R NRTI NNRTI   K43X, S48T, K66X, K104KR, K122E, D123S, I135T, S162A, K173T, Q174K, N175Y, D177E, T200A, Q207E, R211S, V245Q  
411571-F 411571-F NRTI NNRTI M184V L100I, K103N, E138K K49R, V60I, K66X, K122E, D123G, I135V, K173L, Q174K, D177E, V179I, T200A, Q207D, R211K, V245Q  
412584-L 412584-L NRTI NNRTI V75I, M184V Y181C K43X, K49R, V60I, K66X, D121Y, K122E, I132L, I142V, D177E, I178M, Q207E, R211K, T215X, V245E  
415198-C 415198-C NRTI NNRTI  E138A V60I, K66X, T69S, K122E, D123N, I135T, D177E, I178IV, T200A, I202V, Q207X, R211K, V245Q  
416224-F 416224-F NRTI NNRTI   E42G, K66X, K122E, D123S, K173S, Q174K, D177E, V179I, T200A, Q207DE, R211S, F214L, V245H  
419853-T 419853-T NRTI NNRTI M184V V108I, E138A, V179D, Y181C, H221Y K43X, K66X, K101Q, K103R, D121C, K122E, I135IT, I180V, T200A, Q207A, R211S, V245Q  
428157-Y 428157-Y NRTI NNRTI K70R, M184V, T215F, K219Q A98G, K103N, P225H K66X, K122E, D123S, I135T, S162C, K173S, Q174R, D177E, V179I, T200A, Q207A, R211S, F214L, L228K, V245Q  
429748-S 429748-S NRTI NNRTI   E42G, K49R, V60I, K66X, D177E, I178M, G196GE, T200TI, Q207E, R211K, V245K  
430730-Q 430730-Q NRTI NNRTI M184V  K43X, V60I, K66X, K122E, D123X, I135T, I142V, D177E, I178V, Q207E, R211K, V245E  
432842-Z 432842-Z NRTI NNRTI   K66X, K122E, D123N, I142V, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211NS, V245Q  
438002-K 438002-K NRTI NNRTI M184V V106A, E138EK, F227L K66X, K122E, I142IV, A158S, K173S, Q174K, T200A, I202V, Q207A, R211K, V245E  
442087-J 442087-J NRTI NNRTI   K43X, V60I, K66X, D121H, K122E, D123S, D177E, I178IM, T200I, Q207E, R211K, V245K  
442553-K 442553-K NRTI NNRTI   V60I, K66X, K122E, D123S, I135T, K173S, Q174KR, D177E, V179I, R199RT, T200A, Q207E, R211RS, V245E  
447266-H 447266-H NRTI NNRTI M184V Y181C K43X, V60I, K66X, K122E, D123S, I135T, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q I159IK 
450895-T 450895-T NRTI NNRTI   K66X, K122E, D123N, T165I, K173S, D177E, V179I, T200A, I202V, Q207A, R211N, V245Q  
454173-X 454173-X NRTI NNRTI   K49R, V60I, K66X, K102KR, D121Y, K122E, E169D, T200I, Q207E, R211K, V245K  
455877-Q 455877-Q NRTI NNRTI   K43X, K49R, V60I, K66X, D121Y, K122E, I135R, D177A, T200I, Q207G, R211K, V245Q  
461482-L 461482-L NRTI NNRTI   V60I, K64R, K66X, K122E, D123NS, I135T, K173S, Q174K, D177E, I178M, V179I, Q207E, R211RS, V245EK  
461529-D 461529-D NRTI NNRTI   K43X, K49R, V60I, K66X, D121Y, K122E, D123E, I135T, D177E, T200I, Q207E, R211K, I244IV, V245IT N175NS, Y181YN 
461969-G 461969-G NRTI NNRTI   V60I, K66X, K122E, D123S, I135T, K173S, Q174K, D177G, V179I, T200A, Q207A, R211S, F214FL, V245Q  
462979-T 462979-T NRTI NNRTI   K49R, V60I, K66X, K122E, F171Y, I178M, T200I, Q207E, R211K, W239WC, V241VL, V245K H221HD 
464332-Z 464332-Z NRTI NNRTI   K43X, K66X, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q  
467610-A 467610-A NRTI NNRTI   E42G, K49R, V60I, K66X, D121Y, K122E, D123E, D177E, I178M, T200I, Q207E, R211K, V245K  
472465-J 472465-J NRTI NNRTI M184V K103N K66X, K102KR, K122E, D123N, I135IM, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q  
485963-Z 485963-Z NRTI NNRTI M184V Y181C V60I, K66X, K122E, D123S, I135T, T165L, K173A, Q174K, D177E, V179I, I202V, R211S, V245E  
513365-Q 513365-Q NRTI NNRTI M184V Y181C E40D, K43X, K49R, V60I, K65X, D121Y, K122E, Q145C, D177E, I178V, V189I, T200A, I202V, E204K, Q207E, R211K, V245T  
547476-F 547476-F NRTI NNRTI  K103N K43X, K66X, T165I, K173S, D177E, V179I, T200A, Q207A, R211S, V245Q  
551043-A 551043-A NRTI NNRTI Y115F, M184V G190A K43X, V60I, K65X, T69TS, F87FL, K102R, D121Y, K122E, I135T, D177E, L193F, Q207E, R211K, V245T  
560152-P 560152-P NRTI NNRTI   K49R, V60I, K66X, S117P, D121H, K122E, T165I, K166T, D177E, I178M, T200I, Q207E, R211K, V245E  
566968-F 566968-F NRTI NNRTI M184V, T215Y Y181C K43X, V60I, K66X, K122E, D123S, I135T, T165L, K173A, Q174K, D177E, V179I, I202V, R211S, V245Q  
573821-X 573821-X NRTI NNRTI   E42G, S48T, V60I, K66X, K122E, D177E, I178L, V179I, Q207E, R211K, V245E  
573823-P 573823-P NRTI NNRTI   E44X, K66X, S162N, K173S, D177E, V179I, R199RT, I202V, Q207A, R211K, F214L, Q222QH, V245E  
574624-E 574624-E NRTI NNRTI   K43X, K49R, V60I, K66X, D177E, G196K, T200TI, I202V, Q207E, R211K, V245K  
576782-Y 576782-Y NRTI NNRTI  K103N, P225PH K43X, V60I, K66X, D121H, K122E, D123S, I135T, I142V, S162A, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245Q  
581728-T 581728-T NRTI NNRTI M184V, T215F V108I, Y181C, H221Y K43R, E44X, K66X, K122E, I142IV, D177E, I178M, Q207E, R211K, V245K Q242Q* 
592548-K 592548-K NRTI NNRTI K70R, M184V Y181C, H221Y K43X, K49R, V60I, K66X, D121Y, K122E, D123E, I135IT, D177E, E194D, Q207E, R211K, K238R, P243A, V245K  
592553-P 592553-P NRTI NNRTI   K43X, S48T, K66X, K104R, K122E, A158S, K173A, D177E, T200A, Q207E, V245Q  
593867-K 593867-K NRTI NNRTI   E40D, K43X, K66X, V118I, K122E, D123S, K173S, D177E, V179I, Q207A, R211S, F214L, P243A, V245Q  
594832-X 594832-X NRTI NNRTI M184V Y188L K66X, K122E, D123N, I142V, K173S, Q174K, D177E, V179I, T200AE, I202V, Q207A, R211S, V245Q  
612430-Z 612430-Z NRTI NNRTI K70R, M184V, T215V, K219Q A98G, K103N, P225H K64KR, D67X, K101KR, K122E, D123S, I135T, S162C, K173S, Q174R, D177E, V179I, T200A, Q207A, R211S, F214L, L228K, V245Q  
619853-E 619853-E NRTI NNRTI K70R, M184V Y181C, H221Y K43X, K49R, V60I, K66X, D121Y, K122E, D123E, I135IT, D177E, E194D, Q207E, R211K, K238R, P243A, V245K  
624929-G 624929-G NRTI NNRTI K70R, M184V, K219Q K103N E40D, K43X, K49R, I50V, V60I, D67X, D121H, K122E, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245M  
630164-Y 630164-Y NRTI NNRTI M184V K103N V60I, K66X, K122E, D123N, I135T, K173S, Q174K, D177E, T200A, Q207A, R211S, V245K  
637330-H 637330-H NRTI NNRTI   K66X, T69S, K122V, D123N, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, P243S, V245Q  
642621-X 642621-X NRTI NNRTI K70R, M184V G190A K49R, V60I, D67X, D121Y, K122E, I135M, E169D, D177E, I178M, V179I, Q207E, R211K, V245Q  
646166-E 646166-E NRTI NNRTI M184V, T215F Y188L, K238T E42G, V60I, K66X, K122E, D123N, I135T, K173S, Q174K, V179I, T200X, I202V, E203X, Q207E, R211K, L228H, V245Q  
647111-S 647111-S NRTI NNRTI K70R, M184V Y181C E44X, I50V, V60I, K66X, T69N, D123E, A158T, K173S, Q174K, D177E, V179I, I202V, Q207A, F214L, L228R, V245Q  
648367-W 648367-W NRTI NNRTI M184V V108I, Y181C V60I, K66X, K122E, D123S, A158T, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q  
649156-H 649156-H NRTI NNRTI K70R, M184V, T215TI, K219EQ V108I, Y181C E40D, K43X, K49R, V60I, D67X, T69N, D121H, K122E, I135T, I142V, S162N, T200I, Q207E, R211K, Q242K, V245R  
649641-F 649641-F NRTI NNRTI M184V Y181C, H221Y K43X, V60I, K66X, D121Y, K122E, D123E, I135T, I142R, T165I, E169D, Q174L, D177E, I178L, T200A, Q207E, F214L, V245Q  
649788-B 649788-B NRTI NNRTI L74LV, M184V K103N, Y181YC, K238T K43X, K66X, V118I, K122E, D123N, I135T, K173A, Q174K, D177E, V179I, T200A, Q207S, L210M, R211S, F214L, V245Q  
64984OE 64984OE NRTI NNRTI A62V, M184V, T215F Y181C, H221Y K49E, T58I, V60I, K64R, K66X, T69TI, K102R, K122E, I135T, I142V, D177E, V179I, T200IM, I202V, Q207E, R211K, P243H, V245K F61L, P133H 
651755-R 651755-R NRTI NNRTI K70R, M184V, K219Q K101E, E138A, G190A V60I, D67X, K122E, D123N, I135T, K173S, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, V245Q  
654085-B 654085-B NRTI NNRTI M184V, T215F Y181C G45E, V60I, K66X, K104R, K122E, D123N, I135T, I142V, T165L, K173L, Q174K, D177E, V179I, I202V, Q207D, L228R, V245E  
654805-R 654805-R NRTI NNRTI M184V K101E, K103N, E138A, G190A K49R, V60I, K66X, S105T, D121Y, K122E, I135T, D177E, I178L, T200L, Q207G, R211K, V245K  
656178-W 656178-W NRTI NNRTI M184V, T215Y K103N E42G, K49R, V60I, K66X, I135T, E169K, K173E, I178M, T200R, Q207E, R211K, V245K  
659558-B 659558-B NRTI NNRTI M184V E138A, Y181I, H221HY K43X, S48T, G51W, V60VI, K65X, K66E, W88C, K122E, D123N, I135T, A158S, K173A, Q174K, T200A, Q207E, R211RK, F214L, V245Q  
669569-G 669569-G NRTI NNRTI M184V, T215Y K103N, V108VI, E138Q, H221Y K43X, K66X, V75VL, V90VI, K122E, D123S, K173A, Q174K, T200A, I202V, Q207A, V245Q  
670996-Z 670996-Z NRTI NNRTI M184V A98G, G190A, P225H E42G, K66X, K122E, D123S, I135T, K173S, D177E, V179I, T200A, Q207A, R211S, F214L, Q242L, V245Q  
672750-W 672750-W NRTI NNRTI M184V, T215F K101H, G190A K66X, S68G, K122E, D123N, I135T, A158S, K173A, V179I, T200K, Q207A, R211S, V245Q  
673047-Z 673047-Z NRTI NNRTI   K66X, K122E, D123S, K173A, Q174K, D177E, V179T, G196E, E203A, Q207D, R211K, V245Q  
675456-X 675456-X NRTI NNRTI   K43X, I47L, K49R, V60I, K66X, T69A, D121H, K122E, R172RK, D177E, T200I, Q207R, R211K, V245K  
675736-F 675736-F NRTI NNRTI K70KR, M184V, T215F, K219KQ K103N, E138Q E42G, V60I, D67X, K102R, D121Y, K122E, I142V, D177E, I178M, T200I, Q207E, R211K, L228H, Q242H, V245K  
67660-W 67660-W NRTI NNRTI  H221Y K43X, V60I, K65X, S68G, D121Y, K122E, D177E, I178M, T200I, Q207G, R211K, Q222H, V245K N54K, K223L, P225Q 
676606-W 676606-W NRTI NNRTI   K43X, K49R, V60I, K66X, D121Y, K122E, D177E, I178M, Q207E, R211K  
683893-Y 683893-Y NRTI NNRTI V75M, M184V, T215F K103N, E138Q E42G, V60I, D67X, V90I, K122E, D123N, I135T, K173A, Q174K, V179I, D192N, E194K, G196E, T200A, E203K, E204K, R206K, Q207A, R211S, E224K, L228R, E233K, V245E  
686037-B 686037-B NRTI NNRTI M184V, T215Y V108I, Y181C E42G, V60I, K66X, D121Y, K122E, D123E, I135R, S162A, D177E, I178IM, V179I, T200I, Q207E, R211K, L228R, V245E  
692996-G 692996-G NRTI NNRTI M184V, T215Y G190A K43X, V60I, K66X, S68X, V90I, K101Q, K173S, D177E, V179I, T200A, I202V, Q207A, R211K, V245Q  
694502-A 694502-A NRTI NNRTI M184V, T215Y Y181C, H221Y E40D, K43X, K66X, D86E, D123N, I135T, K173S, D177E, V179I, T200A, I202V, Q207V, V241L, V245L  
69512-M 69512-M NRTI NNRTI M184V, T215F K103N, P225H K43X, V60I, K66X, K122E, D123N, D177E, I178M, T200I, Q207E, R211K, Q242H, P243A, V245Q  
695250-Z 695250-Z NRTI NNRTI M184V K103N, P225H I50N, K66X, A98S, K122E, D123S, I135T, K173S, D177E, V179I, T200K, I202V, Q207A, V245Q  
697217-E 697217-E NRTI NNRTI K70R, M184V, T215I, K219E Y181C K49R, V60I, D67X, K122E, I135T, T200L, Q207E, R211K, P243S, V245T  
701104-K 701104-K NRTI NNRTI M184V K103N, V108I S48A, K49R, V60I, K66X, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, Q207A, R211K, V245E  
701595-z 701595-z NRTI NNRTI M184V A98G, L100I I50V, V60I, D67X, K103*, K122E, D123S, I142T, S162D, K173S, Q174K, V179I, T200A, I202V, Q207D, R211G, P236S, K238Q, V245K K82KE, L234V, W239L 
704141-W 704141-W NRTI NNRTI M184V, T215F K101E, Y181C K49KR, K66X, D121H, K122E, T139TI, D177E, Q207E, R211K, V245K  
705552-F 705552-F NRTI NNRTI A62V, V75I, F116Y, Q151M, M184V, K219Q Y181C, H221Y T39A, E40D, K43X, K65X, S68G, T69I, D123DN, A158S, S162ST, K173A, D177E, V179I, T200A, I202V, Q207A, F214L, P243A, V245K E233I 
705554-A 705554-A NRTI NNRTI M184V K103N, H221Y K43X, I50V, V60I, K66X, A98AS, D123S, I135T, I142IV, S162A, K173S, Q174K, D177E, V179I, T200E, I202V, Q207N, R211K, P243A, V245Q  
706463-E 706463-E NRTI NNRTI M184I M230I E44K, I47X, K49R, I50V, G51R, V60I, K66X, W71*, W88C, G93R, G112E, D121H, I135T, I142V, K173S, Q174K, D177E, I178L, V179I, T200A, E204K, R206K, Q207A, R211S, W212*, V245E  
707424-H 707424-H NRTI NNRTI M184V V108I, Y181C, H221Y K43R, K49R, K66X, K122E, D177E, I178L, V179I, E204K, Q207D, R211K, F214L, V245Q  
707985-Z 707985-Z NRTI NNRTI M184V, T215Y K101E, G190A K43X, K49R, V60I, K66X, D121H, K122E, D177E, I178L, E194D, T200M, E203A, Q207E, R211K, V245Q  
734192-Y 734192-Y NRTI NNRTI K70R, M184V, T215F, K219KE Y181C, H221Y E40D, E44X, V60I, K66X, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, K238R, Q242*, V245E  
736013-M 736013-M NRTI NNRTI M184V A98G, K103N K43X, V60I, K66X, D121H, K122Q, I135T, K173Q, Q174K, D177E, V179I, Q207A, R211K  
736513-K 736513-K NRTI NNRTI K70R, M184V, T215TI Y181C, P225H T39R, E40D, M41X, V60I, D67X, T69N, V90I, D121H, K122E, E169D, D177E, I178M, T200A, Q207E, V245K  
736908-X 736908-X NRTI NNRTI M184V, T215Y V106A, F227L E44X, K46R, V60I, K66X, L109I, K122E, D123N, I135M, Q145C, K173S, G196GE, T200A, I202V, Q207A, R211K, V245Q  
741761-H 741761-H NRTI NNRTI M184V K101E, G190A K49R, V60I, K66X, K122E, D123N, K173S, Q174R, D177E, V179I, T200A, Q207A, R211S, P243S, I244L, V245K T240M 
743580-B 743580-B NRTI NNRTI M184V K103N, V108VI, Y181C, H221Y K49R, E53D, V60I, K66X, K101N, D121C, K122E, T139R, S162N, E169D, Q174R, D177E, T200I, Q207E, R211K, V245E K73T, T240M 
744517-P 744517-P NRTI NNRTI M184V G190A K49R, V60I, K66X, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q  
748780-W 748780-W NRTI NNRTI K70R, M184V, T215Y V108VI, Y181V, H221Y K49R, V60I, K66X, K122E, D123S, I135T, K173S, Q174K, D177E, I178V, V179I, Q207A, R211S, P236L, V245Q V241F 
749075-S 749075-S NRTI NNRTI M184V, T215Y Y181V, H221Y K49R, V60I, K66X, K122E, D123S, I135T, K173S, Q174K, D177E, I178V, V179I, Q207A, R211S, P243A, V245E  
750200-X 750200-X NRTI NNRTI L74V, M184V K103N P52A, K66X, K122E, D123N, I142V, K173S, D177E, V179I, T200A, I202V, Q207V, R211E, V245Q  
752422-P 752422-P NRTI NNRTI  G190A E44X, K49R, V60I, K66X, K122E, D123S, K173A, D177E, Q207A, R211S, V245Q  
762355-X 762355-X NRTI NNRTI   K43R, E44X, K49R, V60I, K66X, K122E, I135R, D177E, G196R, Q207E, R211E, V245K L209F