Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Yabar (2012)
Title New subtypes and genetic recombination in HIV type 1-infecting patients with highly active antiretroviral therapy in Peru (2008-2010).
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 244
NumPts 244
Subtype B, A, H, CRF12_BF, C, CRF17_BF

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 244 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
011431010-200110MAB 011431010-200110MAB PI  M46I, I54V, V82A L10F, L24I, L33F T12P, I13V, L19Q, M36MT, R41K, I62V, L63H, I64V, E65D, V77I, T91S  
011431110-200110MAB 011431110-200110MAB PI  L90LM  L10I, N37T, R41K, D60E, Q61E, I62V, L63P, C67S, I72V, V77I, I93L  
011789310-040210MAB 011789310-040210MAB PI  D30N N88D L10I, V11T, K14R, L19I, N37T, R41K, K45KR, Q61E, I62V, L63P, A71AT, V77I, I93L  
011789410-040210MAB 011789410-040210MAB PI  M46I, L90M  L10I, V11T, L19I, K20I, N37T, R41K, K55R, D60E, Q61E, I62V, L63P, I64V, V77I, I93L  
011804010-040210MAB 011804010-040210MAB PI    T12N, R41K, Q61D, L63P, V77I, P79A, I93L  
011895310-040210MAB 011895310-040210MAB PI    T12P, I13V, G16E, M36I, R41K, I62V, L63S, I64V, E65D  
012180010-040210MAB 012180010-040210MAB PI    E35D, M36I, R57K, Q61E, I62V, L63P, I64L, I93L  
017616610-200110MAB 017616610-200110MAB PI    L19IV, R41K, D60E, L63S, I64LV, I72V  
020515010-250210CY 020515010-250210CY PI    T12S, L19T, R41RK, R57RK, D60E, Q61E, I62V, L63P, A71V, V77I, P79S, I93L  
021146510-250210CY 021146510-250210CY PI  L90M  R57K, L63P, V77VI, I93L  
021146610-250210CY 021146610-250210CY PI    T12S, L19Q, M36MI, R41K, L63P, E65D  
021151610-250210CY 021151610-250210CY PI    K14KR, Q18QH, M36I, Q61E, I62V, L63P, I64L, A71V, I72V, V77I, P79S, I93L  
021151810-250210CY 021151810-250210CY PI    M36I, R57K, Q61E, I62IV, L63P, I64L, A71V, I72EV, V77IT, I93L  
021703710-090310MAB 021703710-090310MAB PI    T12I, Q61E, I62V, L63P, K70Q, I72K, T91I, I93L  
021919710-090310MAB 021919710-090310MAB PI    T4S, G16E, L19I, L63S, I72T, Q92K  
030122110-090310MAB 030122110-090310MAB PI  G48V, I54V, V82A, L90M  L10I, K14R, R41K, Q61E, I62V, L63P, I64M, A71V, V77I, I93L  
030169010-260310CY 030169010-260310CY PI  M46I, I50V, I54V, V82A  K14R, K20R, E35D, M36I, R57K, Q61E, L63P, A71V, I72V, I93L  
030530210-260310CY 030530210-260310CY PI    L10I, M36I, Q61E, I62V, L63P, I64L, I93L Y59Y* 
030756410-260310CY 030756410-260310CY PI  M46I, N88S L10F T12P, L19Q, K20I, R41K, I62M, L63P, K70KR, A71T  
031138310-260310CY 031138310-260310CY PI    T12S, I15V, L19I, N37C, R57K, D60E, L63P, I72T, P79DH, V82I  
031138410-290310CY 031138410-290310CY PI  D30N L10F, N88D I13IV, R41K, K45R, L63T, H69Y, A71V, I72T, V77I, I93L  
031138510-290310CY 031138510-290310CY PI    L10I, Q61E, I62V, L63A, E65D, A71T, V77I, I93L  
031138610-290310CY 031138610-290310CY PI    N37S, Q61EK, I62V, L63P, I64L, V77I, I93L  
031138710-290310CY 031138710-290310CY PI  D30N L10F, N88D I13V, R41K, K45KR, Q61DN, L63PQ, I64IV, V77I, I93L  
031138810-290310CY 031138810-290310CY PI   L33F T12P, I13V, I62IV, L63X, V77I, L89M, I93L  
031304710-190410MAB 031304710-190410MAB PI  M46I, I54V, V82A L24I, F53L, G73S L10I, I15V, L19Q, K20M, M36A, I62V, L63P, A71V, I72T  
031859810-290410MAB 031859810-290410MAB PI    I15IV, M36I, R41K, D60E, Q61E, I62V, L63P, V82I, I93L  
040528410-290410MAB 040528410-290410MAB PI    T12TA, G16GE, L63T, I72V, V77I  
040568810-290410MAB 040568810-290410MAB PI  D30N L10F, N88D T12X, I13V, L19I, Q61D, I62V, L63P, A71T, I72T, V77I, I93L  
040741910-290410MAB 040741910-290410MAB PI  L90M  L10I, V11I, I13V, K20I, D60E, Q61E, I62V, L63P, A71T, V77I, Q92QR  
040770710-060510CY 040770710-060510CY PI    Q7H, K14R, L19IT, R41RK, L63A, A71T, V77I, I93L  
041142510-060510CY 041142510-060510CY PI    T12P, K14R, E35D, N37E, L63P, V82I, L89LM, I93L  
041142610-060510CY 041142610-060510CY PI  M46MI, N88S  L10I, K20I, N37D, K45KR, L63T, E65D, I72V, V77I, L89M  
041154710-060510CY 041154710-060510CY PI  D30N N88D I13V, K20I, L33V, K45R, L63A, A71T, I72T, I93L  
041810410-060510CY 041810410-060510CY PI    L10I, V11A, K14KR, E35D, M36I, Q61E, I62V, L63P, I64L, A71V, I93L  
050311310-010610MAB 050311310-010610MAB PI    T12TP, K14R, Q61E, I62V, L63P, E65D, A71V, I72IV, V77I, I93L  
050311410-250610CY 050311410-250610CY PI  M46I, I47V, I50V, L76V, V82A  L10V, I13V, K14R, G16A, L19V, K20M, E35G, M36I, R41K, K55R, L63P, T74S, L89I L33L_L 
050820910-010610MAB 050820910-010610MAB PI    E35D, M36I, R41K, D60E, Q61E, I62V, L63P, I93L  
050829010-010610MAB 050829010-010610MAB PI    N37D, Q61H, L63N  
051273110-160610MAB 051273110-160610MAB PI    L10I, R41K, L63P, I72M, I93L  
051279110-160610MAB 051279110-160610MAB PI    W6WG, L10I, V11T, Q61E, I62V, L63P, I64L, A71V, I72S, V77I, P79S, T91TI, I93L  
051279210-080610MAB 051279210-080610MAB PI    K14KR, E35D, M36I, R41K, D60E, Q61DE, I62V, L63P, I72IV, V77I, I93L  
051279310-030610MAB 051279310-030610MAB PI  D30N K20T, N88D L10I, K14R, I15V, M36I, R41K, Q61E, I62V, L63P, E65D, A71T, I72V, V77I, I93L  
051279410-030610MAB 051279410-030610MAB PI    L5X, L10IV, V11IT, D60E, Q61E, I62IV, L63P, A71V, I72V, V77I, P79A, I93L  
051281910-030610MAB 051281910-030610MAB PI  I54V, V82A, L90M Q58E, G73S L10I, V11I, K20R, M36I, R41K, D60E, Q61E, I62V, L63P, A71V, I72K  
051284310-030610MAB 051284310-030610MAB PI  D30N N88D P39Q, Q61E, I62V, L63PS, I64M, A71V, I72T, V77I, I93L  
051284410-030610MAB 051284410-030610MAB PI    K14R, M36I, W42Y, Q61E, I62V, L63S, I64M, K70T, A71V, I93L  
051284510-030610MAB 051284510-030610MAB PI    Q61DE, I62V, L63S, I64L, V82I, I93L  
051830710-250610CY 051830710-250610CY PI    L10I, I13V, E35D, M36I, R41K, H69K, L89M  
060979310-080710MAB 060979310-080710MAB PI    T12P, K14R, M36I, R41K, D60E, Q61E, I62V, L63P, A71T, I72V, I93L  
061110210-080710MAB 061110210-080710MAB PI    T12A, R41K, D60E, Q61E, I62V, L63P, C67Y, A71V, V77I, P79S, I93L  
061110310-080710MAB 061110310-080710MAB PI    N37T, Q61E, I62V, L63S, I64L, V77I, V82I, I93L  
061131210-130710MAB 061131210-130710MAB PI    L10I, V11T, E35D, N37D, Q61DE, I62V, L63T, I64L, C67S, A71V, I72T, V77I, I93L  
061131310-130710MAB 061131310-130710MAB PI    T12P, K14R, Q61E, I62V, L63P, I64L, C67S, V77I, I93L  
070372210-030810CY 070372210-030810CY PI  D30N L10F, K20T, N88ND I13V, M36I, N37ND, L63E, I64V, A71AT, V75I  
070447510-030810CY 070447510-030810CY PI    K14R, I15V, M36I, N37D, R41K, D60E, Q61D, I62V, L63P, I72V, V77T  
070998310-090810CY 070998310-090810CY PI  D30N, M46MI L10LF, N88D I13V, K14R, N37ND, R41RK, I62V, L63P, I64V, T74S, V75I, V77VI, P79A, I93L  
071171710-030810CY 071171710-030810CY PI    L10V, T12P, K14R, G16E, P39T, R41RK, R57K, Q61D, L63S, E65D, A71T, I72V, V77I, I93L  
071596510-030810CY 071596510-030810CY PI    R57RK, Q61E, L63P, I64L, A71T, V77I, I93L  
071901310-260810MAB 071901310-260810MAB PI    L19I, M36I, R41K, D60E, Q61E, I62V, L63P, V77I, I93L  
080267210-260810MAB 080267210-260810MAB PI    T12S, K14KR, L63P, I72T, V77I  
080316010-260810MAB 080316010-260810MAB PI  D30N, L90LM N88D L10I, V11T, I13V, K14R, K45R, Q61E, I62V, L63P, A71V, V77I, I93L  
081196710-260810MAB 081196710-260810MAB PI  D30N, L90M N88D L10LI, I13IV, E35G, M36I, R57K, I62V, L63P, A71AV, P79D, I93L  
081208810-260810MAB 081208810-260810MAB PI  M46I, L90M G73S L10I, I13V, K20M, R41K, K55KR, D60E, Q61E, I62V, L63P, A71T, I72T, V77I, I93L  
081208910-010910MAB 081208910-010910MAB PI  D30N N88D I13V, E35D, M36I, N37D, K45R, R57K, I62V, L63A, A71T, V82I  
081209010-010910MAB 081209010-010910MAB PI    T12P, K14R, N37H, R41K, Q61E, I62V, L63S, I64L, A71T, V77I, I93L  
081209110-010910MAB 081209110-010910MAB PI  L90M  L10I, N37H, R41K, Q61E, I62V, L63P, I64L, A71V, P79Q, I85IV, I93L  
081225110-010910MAB 081225110-010910MAB PI  I50L, V82VA Q58E, G73S L10I, V11I, T12TP, I13IL, L19I, N37T, K45R, D60E, Q61E, I62V, L63P, A71IV, I72V, V77VI, I93L  
081569810-270910CY 081569810-270910CY PI    E35D, N37S, I62IV, L63P, H69Q, I72V, N98NK  
090443010-270910CY 090443010-270910CY PI    L10I, T12P, I13V, L19I, K43R, L63V, C67Y, A71V, I72M, I93L  
090490610-270910CY 090490610-270910CY PI    T12TA, K14KR, I15V, R57K, D60E, Q61E, I62V, L63P, V77I, I93L  
090491810-270910CY 090491810-270910CY PI    T4S, N37C, R41K, D60E, I62V, L63A  
090491910-270910CY 090491910-270910CY PI    L10I, I15V, E35D, P39Q, L63P, I93L  
090494210-270910CY 090494210-270910CY PI    L10I, T12I, R57K, L63P, V77VI, L89LM, I93L  
100221110-211010CY 100221110-211010CY PI    I3L, L10I, T12TP, L33I, R41K, K45R, D60E, Q61E, I62V, L63P, C67S, V77I, V82I, I93L  
100547110-151010MAB 100547110-151010MAB PI    I13V, Q61E, I62V, L63P, I64M, A71T, I72MV, V77VI, I93L  
100550810-211010CY 100550810-211010CY PI    I13V, Q61E, I62V, L63P, I64M, A71T, I72IMV, V77VI, I93L  
100556710-021110CY 100556710-021110CY PI    T12P, L19I, P39S, R41K, D60E, Q61E, I62V, L63P, I64V, E65ED, A71T, V77I, P79D, I93L  
100705610-021110CY 100705610-021110CY PI    R41K, D60E, Q61E, I62V, L63P, E65D, A71V, I72V, V77I  
100705710-021110CY 100705710-021110CY PI    L10I, V11I, I13IV, L19V, R57K, Q61E, I62V, L63S, I64M, A71V, I72T, P79S, I93L  
100753310-051110CY 100753310-051110CY PI    L19IV, Q61H, L63T, H69Q, I72T, V77I  
100763410-231110MAB 100763410-231110MAB PI    N37S, P39PS, R41K, L63PS, V77I, I93L  
100763610-051110CY 100763610-051110CY PI    L10I, V11A, N37C, Q61E, I62V, L63S, I64M, C67S, A71V, I72T, V77I, V82I, I93L  
100763710-051110CY 100763710-051110CY PI    L10I, V11IT, K14R, Q61D, I62V, L63P, I64L, I72V, V77I, V82I, I93L  
102055310-021210CY 102055310-021210CY PI  M46I, I54IV, V82AT, I84IV F53FL, Q58QE L10I, L19I, K20KR, M36MI, D60DE, Q61DE, I62V, L63P, A71V, I72V, T74TA, V77VI, P79PS, I85IV, I93L  
110216810-021210CY 110216810-021210CY PI    I13V, K14R, I15V, E35D, M36I, R41K, I62V, L63D, H69K, K70R, I72T, V75I, V82I, L89M  
110216910-231210CY 110216910-231210CY PI    K14R, Q61E, I62V, L63S, I64L, A71V, I72V, V77I, P79S, I93L  
110217010-231110MAB 110217010-231110MAB PI    G17E, Q61D, L63P, I64L, I72V, V77I, I93L  
110217110-231110MAB 110217110-231110MAB PI    L10V, G16E, L33V, N37S, P39S, D60E, L63P, L89M  
110246510-251110MAB 110246510-251110MAB PI  M46I, L90M T74P L10I, K20I, P39Q, R41K, D60E, Q61E, I62V, L63P, A71V, V77I, I93L  
110649810-251110MAB 110649810-251110MAB PI    L10V, I13V, G16E, E35D, R57K, L63G, V77I, L89I  
110657910-251110MAB 110657910-251110MAB PI    Q7D, I62IV, L63S, I64IL, I72V, V82I  
110658010-231210CY 110658010-231210CY PI    L10I, V11A, T12P, K14R, R41K, Q61E, I62V, L63P, I64L, G68D, A71V, I72V, I93L  
110949210-271210CY 110949210-271210CY PI  I54V, V82T, N88S  L10I, T12P, I13V, K20I, E35D, M36I, N37E, R57K, D60E, I62V, L63P, I66F, A71I  
111277910-271210CY 111277910-271210CY PI  V32I, I47V, I54L, I84V, L90M L10F, L33F, K43T, G73C, T74P I13V, I15V, Q18L, K20R, E34Q, E35D, M36I, R41K, I62V, L63P, C67CY, I85L  
111523009 111523009 PI    L10I, V11T, R41K, D60E, Q61E, I62V, L63P, I72V, V77I, I93L  
11603610 11603610 PI   Q58E L10I, M36I, R41K, D60E, Q61E, I62V, L63P, P79DN, I93L  
120663010-271210CY 120663010-271210CY PI    L10I, V11T, E35D, Q61E, I62V, L63S, I64L, A71V, I72T, V82I, I93L  
120690910-271210CY 120690910-271210CY PI    T12E, K14R, L19T, I62V, L63P, I64L, T74S, I93L  
50828910 50828910 PI    I13V, E35D, M36MIV, N37D, I62V, L63A, A71V, I72V, T74S, V77I, I93L