Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Roberts (2015)
Title Structured observations reveal slow HIV-1 CTL escape.
Citation PLoS Genet
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 115
NumPts 115
Subtype B, CRF02_AG, C, A, CRF01_AE, CRF24_BG, CRF06_cpx


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Page 1   listing Isolate 1 to Isolate 100 from Total 115 Clinical PR Isolates

PMB100_POL_0 PMB100_POL_0 None    T31TS, E35D, R57K, L63P, A71T, V77I, I93L  
PMB105_POL_0 PMB105_POL_0 None    I15V, E35D, N37D, L63T  
PMB107_POL_0 PMB107_POL_0 None    I13V, K14R, N37D, L63P  
PMB10_POL_0 PMB10_POL_0 None    E35D, N37H, R41K, V77I  
PMB110_POL_0 PMB110_POL_0 None    I13V, K14R, K20I, E35N, M36I, R41K, R57K, L63P, G68E, H69K, K70R, L89M, Q92K  
PMB111_POL_0 PMB111_POL_0 None    T12P, K14R, E35D, N37S, R57K, I62V, L63H, A71T, I72V  
PMB112_POL_0 PMB112_POL_0 None    G16E, L33I, E35D, N37A, P39T, L63P, I64V, A71V, I93L  
PMB113_POL_0 PMB113_POL_0 None    K14R, I15V, I93IL  
PMB115_POL_0 PMB115_POL_0 None    N37C, P39Q, L63P, I64V  
PMB118_POL_0 PMB118_POL_0 None    E35D, N37D, I62V, L63P, A71T, V77I, I93L  
PMB11_POL_0 PMB11_POL_0 None    E35ED, N37S, L63P, V77I, Q92K  
PMB120_POL_0 PMB120_POL_0 None    L19T, E35D, M36I, R41K, R57K, L63P  
PMB121_POL_0 PMB121_POL_0 None    E35D, N37D, L63P, A71T, Q92R  
PMB122_POL_0 PMB122_POL_0 None    E35D, N37S, R41K, K45R, L63P, I64L, V77I, I93L  
PMB123_POL_0 PMB123_POL_0 None    M36L, N37S, I62V, L63P, V77I  
PMB124_POL_0 PMB124_POL_0 None    E35D, N37S, L63P  
PMB125_POL_0 PMB125_POL_0 None    I15V, L38I, L63P  
PMB126_POL_0 PMB126_POL_0 None    K14R, K20R, N37D, L63P, I93L  
PMB127_POL_0 PMB127_POL_0 None    L10LI, T12TS, K14R, I15V, E35D, L63P, I93L  
PMB129_POL_0 PMB129_POL_0 None    M36I, N37S, I62V, L63S  
PMB12_POL_0 PMB12_POL_0 None    I13V, L19I, P39Q, R41K, L63P, I64V, E65D  
PMB130_POL_0 PMB130_POL_0 None    L10I, K20R, T31P, E35D, I62V, L63S, A71T, I72T, I93L  
PMB131_POL_0 PMB131_POL_0 None    I13V, K14R, G17E, K20I, M36I, N37S, R41K, H69K, L89M  
PMB132_POL_0 PMB132_POL_0 None    L19Q, N37S, Q61N, L63S  
PMB134_POL_0 PMB134_POL_0 None    G17E, R57K, L63P, I93L  
PMB135_POL_0 PMB135_POL_0 None    L10V, K14R, L19V, E35D, M36I, R41K, L63P  
PMB136_POL_0 PMB136_POL_0 None    G17D, L19I, N37K, R41K, L63H  
PMB137_POL_0 PMB137_POL_0 None    I13IV, I15IV, R57K, I62IV, L63P, E65D, V77I  
PMB138_POL_0 PMB138_POL_0 None    T12P, K14R, E35D, P39Q, D60E, L63P, A71T, I93L  
PMB13_POL_0 PMB13_POL_0 None    L10I, L33I, E35D, N37S, R41K, L63T, A71T, V77VI, I93L  
PMB142_POL_0 PMB142_POL_0 None    L10I, L33I, E35D, N37S, R41K, L63T, A71T, I93L  
PMB143_POL_0 PMB143_POL_0 None    T12S, I15V, L19I, M36L, N37S, R41K, L63S, H69K, L89M, I93L  
PMB144_POL_0 PMB144_POL_0 None    E35D, M36I, N37D, I62V, L63P, A71T, V77I, I93L  
PMB145_POL_0 PMB145_POL_0 None    T12PS, I13V, L19I, N37S, I64V D25DY 
PMB146_POL_0 PMB146_POL_0 None    E35D, N37D, R41K, L63P, A71T, Q92R  
PMB147_POL_0 PMB147_POL_0 None    I13V, L19I, R41K, D60E, L63P, I72V, V77I, I93L  
PMB148_POL_0 PMB148_POL_0 None    G17E, L19I, N37S, L63T, E65D, K70R, I72T, V77I  
PMB151_POL_0 PMB151_POL_0 None    Q7H, L10V, K14R, I15V, E35D, R41K, L63P  
PMB152_POL_0 PMB152_POL_0 None    E35D, K43KR, Q61E, L63P, V77I, I93L  
PMB153_POL_0 PMB153_POL_0 None    I62V, L63H, K70E, A71T, V77I, I93IL  
PMB15_POL_0 PMB15_POL_0 None    I15V, L19I, N37S  
PMB16_POL_0 PMB16_POL_0 None    L10LI, K14R, N37S, R41K, L63LP, I64V, V77VI, I93IL  
PMB17_POL_0 PMB17_POL_0 None    K14R, L63Q, H69HQ, V77I  
PMB18_POL_0 PMB18_POL_0 None    I13V, G16E, E34G, M36I, P39Q, R41K, I62V, L63P, I64M, L89M  
PMB1_POL_0 PMB1_POL_0 None    T12S, I15V  
PMB22_POL_0 PMB22_POL_0 None    L63P  
PMB24_POL_0 PMB24_POL_0 None    I15IV, G16E, E35D, L63S, I72IV, Q92K  
PMB25_POL_0 PMB25_POL_0 None    G17E, L19I, E35D, L63T, E65D, H69Y, I72T  
PMB26_POL_0 PMB26_POL_0 None    N37E, Q61L, L63P, I93L  
PMB27_POL_0 PMB27_POL_0 None    T12N, L63P  
PMB28_POL_0 PMB28_POL_0 None    I15V, E35D, N37D, L63T, N98NS  
PMB29_POL_0 PMB29_POL_0 None    T12A, R41K, L63P, I93L  
PMB30_POL_0 PMB30_POL_0 None    G16E, L33I, E35D, N37A, P39T, L63P, I64V, A71V, I93L  
PMB31_POL_0 PMB31_POL_0 None    T12A, E35D, R41K, L63P, A71T, I93L  
PMB32_POL_0 PMB32_POL_0 None    I13V, K20R, M36I, R41K, H69K, L89I  
PMB33_POL_0 PMB33_POL_0 None    I13V, G17D, L19I, E35ED, N37X, R41RK, R57RK, L63H  
PMB35_POL_0 PMB35_POL_0 None    I15V, E35D, N37D, L63T  
PMB36_POL_0 PMB36_POL_0 None    I15V, L19I, E35D, R57K, A71V, I93L  
PMB37_POL_0 PMB37_POL_0 None    K14N, R41K, K45R, Q61D, L63P, I72V, I93L  
PMB40_POL_0 PMB40_POL_0 None    K14R, N37S, R41K, L63P, K70R  
PMB42_POL_0 PMB42_POL_0 None    N37C, L63P  
PMB44_POL_0 PMB44_POL_0 None    I13V, I15V, L63P  
PMB45_POL_0 PMB45_POL_0 None    L10V, I13V, L33V, E35D, N37I, L63S, I64V  
PMB46_POL_0 PMB46_POL_0 None    L10I, L63P, V77I, I93L  
PMB47_POL_0 PMB47_POL_0 None    L10V, I13V, M36I, L63P  
PMB48_POL_0 PMB48_POL_0 None    E35D, M36I, N37D, I62V, I64L, A71V, T91I, I93L  
PMB49_POL_0 PMB49_POL_0 None    N37S, I62V, L63P, V77I, I93L  
PMB50_POL_0 PMB50_POL_0 None    K14R, N37D, D60E, L63C, V82I  
PMB51_POL_0 PMB51_POL_0 None    T12A, I13V, N37D, R41K, D60E, Q61E, L63P  
PMB53_POL_0 PMB53_POL_0 None    T12K, I15V, L19I, K20R, M36I, R41K, R57K, L63HR, H69Q, K70E  
PMB54_POL_0 PMB54_POL_0 None    I13V, G16E, N37S, P39S, D60E, L63P, I64V  
PMB55_POL_0 PMB55_POL_0 None    I13A, G17E, K20I, M36I, R41K, L63P, A71T, I93L  
PMB57_POL_0 PMB57_POL_0 None    I15V, E35D, N37D, L63T  
PMB58_POL_0 PMB58_POL_0 None    E35D, I62V, L63A, A71V, V77I, I93L  
PMB59_POL_0 PMB59_POL_0 None    K20R, E35D, N37D, L63P, K70R, I93L  
PMB5_POL_0 PMB5_POL_0 None    E35D, N37D, L63P, A71T, Q92QR  
PMB60_POL_0 PMB60_POL_0 None    L10V, I13V, K14R, L33V, N37S, R41K, I62V, L63T, I64V, E65D  
PMB64_POL_0 PMB64_POL_0 None    I13V, E35D, N37D, L63P, H69Y, I93L  
PMB66_POL_0 PMB66_POL_0 None    L19I, E35D, N37D, L63P  
PMB67_POL_0 PMB67_POL_0 None    I64V, I72V  
PMB69_POL_0 PMB69_POL_0 None    L10V, K14R, I15V, E35D, N37NS, I62IV, L63P, I64IV  
PMB6_POL_0 PMB6_POL_0 None    E35D, N37S, L63P, I72V, V77I, I93L  
PMB70_POL_0 PMB70_POL_0 None  V82L  N37S, L63P, I93L  
PMB73_POL_0 PMB73_POL_0 None    I15V, L38I, L63P  
PMB74_POL_0 PMB74_POL_0 None    E35D, R41K, L63P, V77VI, I93L  
PMB78_POL_0 PMB78_POL_0 None    T12P, I15V, G16E, L19I, E35D, M36I, R41K, L63A, H69K, I93L  
PMB79_POL_0 PMB79_POL_0 None    L10M, I15V, L19I, M36I, R41K, G68E, H69K, L89M, I93L  
PMB80_POL_0 PMB80_POL_0 None    N37S, I64V, I72M, V77I  
PMB82_POL_0 PMB82_POL_0 None    G17E, N37S, I62V, L63T, E65D, K70R, I72T, V77I  
PMB83_POL_0 PMB83_POL_0 None    I13V, K14R, K20I, M36I, N37D, R41K, I64M, H69K, L89M  
PMB84_POL_0 PMB84_POL_0 None    I13V, N37Q, L63P  
PMB85_POL_0 PMB85_POL_0 None    L10I, M36I, R41K, I62V, E65ED, I93L  
PMB90_POL_0 PMB90_POL_0 None    T12S, I15V, L19I, M36I, N37K, R41N, D60E, I62V, L63P, H69K, I72M, L89M, I93L  
PMB91_POL_0 PMB91_POL_0 None    L10I, I13V, L63P, I93L  
PMB93_POL_0 PMB93_POL_0 None    I13V, M36I, I64V  
PMB94_POL_0 PMB94_POL_0 None    K20R, L33V, M36I, R41K, I62V, L63P  
PMB95_POL_0 PMB95_POL_0 None    L10V, I13V, E35D, M36I, R41K, Q61N, L63P, C67Y, A71T, V77I, I93L  
PMB98_POL_0 PMB98_POL_0 None    T12A, I13V, K14R, D60E, L63P  
PMB99_POL_0 PMB99_POL_0 None    T12P, L19V, N37S, L63T, H69Y, I93L  
PMB9_POL_0 PMB9_POL_0 None    L10I, L19I, K20R, R57K, L63P, V77I, F99L