Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Monleau (2011)
Title Antiretroviral drug resistance in HIV-1 infected patients receiving antiretroviral treatment in routine clinics in Cotonou, Benin
Citation J. AIDS HIV Res
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 31
NumPts 31
Subtype CRF02_AG, CRF45_cpx, CRF06_cpx, A, G, B

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
B001 B001 RTI RTI   V35T, E36A, T39E, S68G, D123E, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, P243H, V245Q, K281R, T286A, E291D, V292I, I293V, P294V, E297K, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, T403M, E432D, I434H, E438D V435N 
B002 B002 RTI RTI   V35T, T39A, D123KT, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211RS, V245K, T286A, E291D, V292I, I293V, P294T, K311KR, S322A, I326V, I329V, G335D, R356K, M357K, G359S, A371V, I375V, A376S, T377TI, S379C, K390R, A400AT, T403TM, E432D  
B004 B004 RTI RTI M184V K103N, P225H E6EK, V35T, E36D, V90I, K122E, D123DN, I135V, S162A, K173A, Q174K, D177E, T200A, Q207A, R211T, V245Q, E248N, T286A, E291D, V292I, I293V, P294T, E297D, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, A376ST, T386A, K390R, E399ED, A400T, T403M  
B005 B005 RTI RTI M184V K103N, M230L K32KQ, V35I, T39A, K122E, I135L, I142V, S162A, K173T, Q174E, D177E, I178V, T200A, Q207N, R211K, H221L, V245Q  
B008 B008 RTI RTI D67DN, K70R, M184V A98AG, K103N, K238T, N348NI V35T, T39K, K43E, I135T, Q174R, D177E, I202V, Q207K, R211Q, V245Q, E248D, D250E, A272S, T286A, E291D, V292I, I293V, P313T, V317A, G335D, P345Q, F346Y, M357V, G359S, K366R, A376T, T377M, S379C, T386TA, K390R, A400T, E404D, E432D  
B011 B011 RTI RTI M41L, D67G, K70R, L74I, M184V, K219E A98G, K103N, P225H V35T, V60I, S68G, K122E, I135L, S162A, K173T, D177E, I202V, Q207E, L210M, P243Q, V245Q, T286A, E291D, V292I, I293V, S322T, I329V, G335D, R356K, M357R, G359S, A371V, I375V, A376S, T377Q, K390R, A400T, T403M, E432D  
B013 B013 RTI RTI M184V K103N, Y181C, H221Y, P225PH V35T, T39A, E40D, V60I, K122E, D123E, I135V, S162A, M164ML, K173S, D177E, T200A, Q207A, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357R, G359S, A371V, A376S, K390R, A400T, T403M, E404D  
B015 B015 RTI RTI M41L, D67DN, K70KR, M184V, T215Y K103N V35T, V60I, D123E, I135V, S162A, Q174E, D177E, T200A, I202V, Q207A, R211K, V245Q, A272P, T286A, I293V, P294T, S322T, G335D, R356K, M357R, G359S, A371V, I375V, I382V, E399D, A400V, E432D  
B020 B020 RTI RTI M184V  E6D, V35T, V60I, K122P, I135V, A158S, S162A, K173T, Q174K, D177E, T200V, Q207N, V245Q  
B024 B024 RTI RTI M41L, V75I, M184V, L210W, T215Y G190A K11T, V35T, T39N, V60I, V118VI, D121H, K122E, D123S, I132L, I135IT, K173A, Q174K, D177E, I178F, E194ED, T200A, Q207A, R211S, V245Q, E291D, V292I, I293V, P294T, L295M, E297R, S322T, I326IV, G335D, M357K, G359S, K366R, T369V, A371V, I375V, K390R, A400T, E432D N54NK 
B034 B034 RTI RTI M41L, D67DG, K70R, L74V, M184V, K219Q A98G, L100I, K103N K20R, V35T, T39K, K43E, V60I, T69N, R78RK, V118I, K122E, K173T, Q174K, D177E, I178M, T200A, E203K, Q207E, F214L, L228R, V245Q, E248D, D250E, S251D, A272P, T286A, E291D, V292I, I293V, E297A, L301M, I329V, Q334L, G335D, F346Y, K350KR, M357R, R358G, G359S, A371V  
B044 B044 RTI RTI M41L, D67N, M184I, L210W, T215Y, K219R V106M, V108I, V179E, F227L, N348I K20R, V35T, E36D, T39I, K43E, E44A, V60I, V90I, T107S, L109I, V118I, K122P, I135V, I159L, S162A, S163A, K173T, Q174K, D177E, V189I, T200A, I202V, E203K, Q207E, K223E, V245Q, A272P, T286A, E291ED, V292VI, I293V, P294T, S322T, G335D, G352R, R356K, M357K, R358G, A360S, H361P, A371V, I375V, T386I, K390R, T403R L282Q, G359F, T362H, N363NK, K388K* 
B050 B050 RTI RTI M184V K101KE, K103N E28EK, V35T, T39TI, V60I, K64R, K122E, I135V, S162C, Q174K, D177E, I178M, T200A, Q207E, R211K, V245K, A272P, K281R, E291D, V292I, I293V, E297A, S322A, I329V, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, K366R, A371V, A376C, T377L, T386I, Q394R, A400V, K431T  
B054 B054 RTI RTI M184V K103N, V108I V21I, K32R, V35T, T39M, E53D, V60I, R78RK, K122P, K126R, I135T, S162A, K173M, Q174K, D177E, G196E, T200A, Q207E, V245K, D250E, S251D, T286A, A288T, E291D, V292I, I293V, E297A, K311R, F346H, N348T, M357T, R358K, G359S, A376S, T377L, K385KR, K390R, I393M, E399D, A400T, T403M  
B059 B059 RTI RTI M184V, K219HN K103N, Y181C E29ED, V35T, K49R, V60I, K122P, I135V, S162A, K173I, Q174K, D177E, T200A, Q207E, F214L, L228R, V245Q, K277R, T286A, E291D, V292I, I293V, P294T, R307K, S322T, G335D, R356K, M357R, G359S, T369A, A371V, I375V, A376S, K390R, K395R, A400T, T403M, E404D  
B064 B064 RTI RTI M184V, T215F K103N, M230L V35T, D121DH, S162A, K173T, Q174R, D177E, T200A, Q207K, R211E, V245Q, L283I, E291D, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359S, V365I, T369V, A371V, I375V, A376S, T377I, K390R, T403M V118VF, R125RI 
B067 B067 RTI RTI M184V V179E, Y188L V35T, E36D, T39I, V60I, V90I, D123E, I135V, S162A, K173T, Q174K, D177E, T200A, E203ED, Q207DN, R211K, F214FL, V245Q, E248D, D250X, S251H, A272P, T286A, E291D, V292I, I293V, P294T, S322T, E328D, G335D, R356K, M357K, G359S, A371V, I375V, A376S, T377I, K390R, A400T, E432D V381C, I382N, W383M 
B078 B078 RTI RTI M184V, L210LW Y181C K20R, V35T, T39M, V90I, K101R, D121Y, K122E, I135T, T139TR, S162C, K173T, Q174K, D177E, I178L, V179I, Q207E, R211K, F214FL, L228LQR, V245Q, D250E, S251N, K281R, T286A, A288T, E291D, V292I, I293V, V317A, F346Y, M357V, G359S, A376AS, K390R, A400T, E404D  
B081 B081 RTI RTI  K103N E28G, V35T, E36ED, V60I, S68G, V90I, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, Y232H, V245E, A272P, K281R, T286A, E291D, V292I, I293V, P294T, S322T, G335D, F346L, R356K, M357K, G359S, K366KR, T369A, A371V, I375V, A376V, K390R, A400T, T403V, E432D, V435A  
B089 B089 RTI RTI   V35T, E36D, T39L, D123E, S162A, T165I, K173T, Q174N, D177E, I178M, G196E, T200A, Q207E, V245Q, E248V, K281R, T286A, E291D, V292I, I293V, P294T, S322T, I326IV, G335D, R356K, M357R, G359S, A371V, I375V, K390R, I393ILV, E399D, T403M, E432D  
B097 B097 RTI RTI  K103N, P225H V35T, T39M, R78RK, I135L, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, S322A, I326V, G335D, R356K, M357K, G359S, K366R, T369A, E370D, A371V, A376V, V381I, K390R, A400T, T403A, T409N  
B100 B100 RTI RTI M184V K103NS, V106A, V108VI E29EK, V35T, T39A, K102R, K122P, I135V, I142V, A158AS, S162A, K173A, Q174R, D177E, T200A, Q207E, R211K, V245Q, E248D, A272P, K275R, V276I, T286A, E291D, V292I, I293V, P294T, V317VA, S322T, I326V, G335D, R356K, M357K, G359S, T369V, A371V, I375A, K390R, K395R, E399D, T403M, E432D  
B103 B103 RTI RTI   V35T, V60I, K122AV, I135T, S162A, D177EG, T200A, Q207E, R211K, V245K, K281R, E291D, V292I, I293V, P294AT, S322T, G335D, R356K, M357R, G359S, V381I, K390R, K395R, A400T, T403M, E432D  
B107 B107 RTI RTI M184V K101E, G190A V35T, K49R, V60I, D121Y, K122E, S162A, K173T, Q174R, D177E, I178M, T200A, Q207E, R211K, P243T, V245Q, A272P, T286A, I293V, R356K, M357G, A360T, A376S, T377M, T386I, K390R, E399D, A400T  
B108 B108 RTI RTI L74LV, M184V K101KE, Y181C, G190A K11A, I31X, V35T, T39Q, K173T, Q174K, G196E, T200A, E203EK, Q207E, V245Q, D250E, T286A, V292I, I293V, K311R, E328D, F346Y, M357V, G359S, I375V, V381I, K390R, A400T K30T 
B110 B110 RTI RTI M184V Y181YC, H221HY, F227FL, M230ML K20R, V35T, E36ED, T39M, K49R, V60I, K104KR, P119PS, I135V, S162AT, K173A, Q174K, D177E, I178M, T200A, Q207D, T215X, V245E, V276VI, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357K, G359S, K366R, I375V, T377L, K390R, T403M, E432D S117SL 
B113 B113 RTI RTI  K103N K11H, V35T, E36T, S68G, K122E, D123N, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245E, A272AP, V276VI, K281R, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357R, G359S, A371V, I375V, A376T, V381I, K390R, A400T, T403M, E432D  
B115 B115 RTI RTI M184MV K101KE, Y181C E6K, K11T, T27S, V35T, E36A, T39K, K43E, K122E, D123S, I135T, I142V, S162D, K173S, D177E, V179I, T200A, Q207A, R211RK, V245Q, K281R, T286A, E291D, I293V, P294T, E312D, G335D, R356K, M357K, G359S, T369V, A371V, I375V, A376X, I380V, K390R, A400T, T403M, W410CY, E432D  
B118 B118 RTI RTI M184V V108I, G190A K22R, V35T, T39L, V118I, K122V, S134R, I135T, T165L, K173A, Q174K, D177E, I178V, T200A, Q207E, R211K, F214L, V245H, E248N, A272S, T286A, E291D, V292I, I293V, E297A, G335D, F346Y, R356K, M357R, G359S, A376S, T377M, K390R, A400T, K431T V254VA 
B120 B120 RTI RTI M184V, T215Y A98G, K103N K20R, R78RK, K101KQ, I135IM, A158S, S162A, K173T, Q174K, D177E, I178IM, T200A, Q207E, V245E, V276I, Q278E, T286A, E291D, V292I, I293V, P294T, S322A, G335D, R356K, M357K, G359S, K366R, V381I, K390R, K395R, E399D, A400T, P420L, P421L A33AT 
B121 B121 RTI RTI  K101E V21I, K32R, V35T, T39M, V60I, I135T, S162Y, K173Q, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D