Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Arimide (2018)
Title HIV-genetic diversity and drug resistance transmission clusters in Gondar, Northern Ethiopia, 2003-2013.
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 67
NumPts 67
Subtype C, A, B

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
ETHTDRGON001 ETHTDRGON001 None    T12S, I15V, L19I, E35D, M36I, N37D, R41K, K45R, R57K, L63P, E65ED, H69K, L89M, I93L  
ETHTDRGON010 ETHTDRGON010 None    I15V, L19IV, M36I, R41K, H69K, T74S, L89M, I93L  
ETHTDRGON011 ETHTDRGON011 None   K20T I15V, L19Q, M36I, R41K, R57K, H69K, L89M  
ETHTDRGON015 ETHTDRGON015 None    R41K, R57K, L63S, H69K, L89M, I93L L38L_SL 
ETHTDRGON016 ETHTDRGON016 None    T12S, I15V, L19T, K20R, M36I, R41K, R57K, H69K, L89LM, I93L  
ETHTDRGON018 ETHTDRGON018 None    T12A, L19I, M36I, R41K, L63T, H69K, A71T, I93L  
ETHTDRGON029 ETHTDRGON029 None    K14R, I15V, M36I, R41K, H69K, T74S, L89M, I93L  
ETHTDRGON030 ETHTDRGON030 None    K14R, I15V, L19LI, M36I, N37D, R41K, I62V, L63AS, H69K, A71AT, I72IM, I93L  
ETHTDRGON038 ETHTDRGON038 None    M36I, R41K, L63T, H69K, L89M  
ETHTDRGON039 ETHTDRGON039 None    I15V, L19T, M36I, R41K, L63P, H69K, I93L  
ETHTDRGON043 ETHTDRGON043 None    T12S, I15V, L19V, M36I, R41K, L63V, I64L, H69K, L89M, I93L  
ETHTDRGON044 ETHTDRGON044 None    T12A, I15V, G16E, E35D, M36L, R41K, L63A, H69K, L89M, I93L  
ETHTDRGON045 ETHTDRGON045 None    K14KE, I15V, L19I, M36I, R41K, Q61N, L63T, H69K, I93L  
ETHTDRGON047 ETHTDRGON047 None    M36I, R41K, L63S, I64L, H69K, L89M, I93L  
ETHTDRGON048 ETHTDRGON048 None    I13IV, I15V, L19I, K20R, M36I, R41K, R57K, L63T, H69K, L89M, I93L  
ETHTDRGON049 ETHTDRGON049 None    T12S, I15V, L19I, E35D, M36I, R41RK, R57RK, L63V, H69K, T74TA, L89M, I93L  
ETHTDRGON050 ETHTDRGON050 None    I15V, M36I, R41K, L63LV, H69K, T74A, L89M, I93L  
ETHTDRGON052 ETHTDRGON052 None    T12S, I15V, G16E, L19I, M36I, R41K, K43KR, Q61QHR, L63Q, H69K, I72EK, V82I, L89IM, I93L  
ETHTDRGON053 ETHTDRGON053 None    T12S, I15V, L19I, M36I, R41K, I64IL, H69K, T74S, L89M, I93L  
ETHTDRGON055 ETHTDRGON055 None    T12TS, I15IV, K20KR, M36MIL, N37NS, R41RK, L63LI, H69X, L89LM, I93IL  
ETHTDRGON056 ETHTDRGON056 None    I15V, M36I, R41K, H69K, V82I, L89M, I93L  
ETHTDRGON058 ETHTDRGON058 None    T12S, L19V, M36I, R41K, H69K, L89M  
ETHTDRGON059 ETHTDRGON059 None    K14KR, I15V, L19I, M36I, R41K, L63T, H69K, P79PA, V82VI, L89M, I93L  
ETHTDRGON060 ETHTDRGON060 None    L19T, M36I, N37ND, R41K, D60DE, L63P, H69K, I93L  
ETHTDRGON061 ETHTDRGON061 None    K14KR, I15V, Q18L, L19I, M36I, N37D, R41K, L63P, H69K, L89M, I93L P39I 
ETHTDRGON062 ETHTDRGON062 None    T12PS, I15V, L19I, M36I, R41K, L63H, H69K, K70E, A71T, I93L  
ETHTDRGON063 ETHTDRGON063 None    T12TS, I15V, K20R, E35D, M36I, R41K, L63S, H69K, L89M, I93L  
ETHTDRGON064 ETHTDRGON064 None    I13V, E35D, M36I, R41K, R57K, H69K, K70R, L89M  
ETHTDRGON066 ETHTDRGON066 None    T12S, G17D, L19I, M36I, K45KR, R57K, L63Q, H69K, A71T, I93L  
ETHTDRGON068 ETHTDRGON068 None    K14R, I15V, M36I, R41K, L63T, I64M, H69K, L89M, I93L  
ETHTDRGON069 ETHTDRGON069 None    I15V, L19T, M36I, N37D, L63S, H69K, T74A, L89M, I93L  
ETHTDRGON070 ETHTDRGON070 None    T12TS, G16GE, L19LQ, M36I, H69K, L89M, I93L  
ETHTDRGON071 ETHTDRGON071 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I72IL, L89M, I93L  
ETHTDRGON072 ETHTDRGON072 None    I15V, M36I, R41K, H69K, L89M, I93L  
ETHTDRGON073 ETHTDRGON073 None    I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
ETHTDRGON075 ETHTDRGON075 None    T12S, I15V, L19I, M36I, R41K, Q61H, L63S, H69K, K70R, V82I, L89M, I93L  
ETHTDRGON077 ETHTDRGON077 None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, D60E, L63T, H69K, V82I, L89M, I93L  
ETHTDRGON078 ETHTDRGON078 None    I15V, M36I, I62V, L63P, H69K, L89M, I93L  
ETHTDRGON079 ETHTDRGON079 None    L19T, M36I, R41K, D60E, Q61N, L63S, H69K, I93L  
ETHTDRGON080 ETHTDRGON080 None    L10M, E35D, M36I, P39S, R41K, L63LP, H69K, L89M, I93L  
ETHTDRGON081 ETHTDRGON081 None    T12S, I15V, G16E, L19I, M36I, L63V, H69K, L89M, I93L  
ETHTDRGON082 ETHTDRGON082 None    I15V, E35D, M36I, R41K, R57K, L63P, I64L, H69K, L89M, I93L  
ETHTDRGON083 ETHTDRGON083 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHTDRGON084 ETHTDRGON084 None    I15V, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
ETHTDRGON085 ETHTDRGON085 None    T12P, I15V, G16E, M36I, R41K, L63LH, H69K, L89M, I93L  
ETHTDRGON086 ETHTDRGON086 None    K14R, I15V, M36I, R41K, C67E, H69K, L89M, I93L  
ETHTDRGON087 ETHTDRGON087 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHTDRGON088 ETHTDRGON088 None    T12S, I15V, K20R, M36I, R41K, R57K, H69K, L89M, I93L  
ETHTDRGON089 ETHTDRGON089 None    I15V, L19T, M36I, R41K, L63Q, I64L, H69K, V82I, L89M, I93L  
ETHTDRGON091 ETHTDRGON091 None    T12S, G16A, L19I, N37S, R41K, H69K, V77I, L89M, I93L  
ETHTDRGON092 ETHTDRGON092 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
ETHTDRGON094 ETHTDRGON094 None    I15V, M36I, N37D, R41K, L63S, I64V, H69K, K70KR, I93L  
ETHTDRGON507 ETHTDRGON507 None    T12N, K20R, M36I, R41K, H69K, L89M, I93L  
ETHTDRGON508 ETHTDRGON508 None    I15V, G17E, K20R, M36I, R41K, L63V, E65D, H69K, I72V, L89M, I93L  
ETHTDRGON510 ETHTDRGON510 None    I13V, I15V, K20R, M36I, R41K, L63T, H69K, V82I, L89M, I93L  
ETHTDRGON511 ETHTDRGON511 None    T12PS, K14KR, I15V, L19Q, M36I, R41K, L63P, H69K, I93L  
ETHTDRGON513 ETHTDRGON513 None    T12S, K14R, I15V, M36I, R41K, H69K, L89M, I93L  
ETHTDRGON514 ETHTDRGON514 None    K14R, I15V, L19I, M36I, N37D, R41K, H69K, L89M, I93L  
ETHTDRGON516 ETHTDRGON516 None    T12S, I15V, L19I, M36I, R41K, L63T, H69K, L89M, I93L  
ETHTDRGON518 ETHTDRGON518 None    T12S, I15V, L19IV, M36I, R41K, L63S, H69K, I93L  
ETHTDRGON519 ETHTDRGON519 None    L10I, L19T, M36I, R41K, H69Q, L89M, I93L  
ETHTDRGON520 ETHTDRGON520 None    T12S, G16E, L19I, M36I, R41K, I62IV, L63ST, H69K, L89M, I93L  
ETHTDRGON522 ETHTDRGON522 None    T12S, I15V, L19I, M36I, R41K, L63ST, H69K, L89M, I93L  
ETHTDRGON526 ETHTDRGON526 None    K14R, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ETHTDRGON527 ETHTDRGON527 None    M36I, R41K, H69Q, L89M, I93L  
ETHTDRGON528 ETHTDRGON528 None    T12S, I15V, L19I, M36I, R41K, D60E, Q61N, L63V, E65D, H69K, L89M, I93L G17S 
GONDORHIVDR051 GONDORHIVDR051 None    K14KR, G16E, K20R, M36I, P39S, R41K, L63S, I64M, H69K, L89M, I93L