Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Yebra (2018)
Title A high HIV-1 strain variability in London, UK, revealed by full-genome analysis: Results from the ICONIC project.
Citation PLoS ONE
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 251
NumPts 251
Subtype B, C, CRF02_AG, A, D, CRF01_AE, G, CRF06_cpx, F, B + F, Unknown, G + CRF02_AG, CRF13_cpx, CRF18_cpx, CRF03_AB, CRF07_BC, CRF25_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 251 Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
PT13592_1_25.3 ISO13592_1_25.3 Unknown    T206S, L234I, N254Q  
PT13612_1_18.3 ISO13612_1_18.3 Unknown    K14R, I72V, L101I  
PT13612_1_30.3 ISO13612_1_30.3 Unknown    D6E, E10D, D25E, V31I, M50T, L74I, L101I, T112V, S119T, T124G, T125A, K136Q, D167E, V201I, T218I, L234I, R269K  
PT14535_1_20.3 ISO14535_1_20.3 Unknown    E11D, K14R, S24N, V31I, I72V, A91G, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PT14535_1_23.3 ISO14535_1_23.3 Unknown    E10G, K14R, S39C, I72V, L101I, T124A, T125A, G134S, K136T, V201I, T218S, Q221N, L234I  
PT14535_1_33.3 ISO14535_1_33.3 Unknown    V201I, N222K, L234I, S283G  
PT14592_1_55.4 ISO14592_1_55.4 Unknown    V201I, T218I, L234I, D256E, A265V, D278A, S283G, D288N  
PT14592_1_60.3 ISO14592_1_60.3 Unknown    E11D, S119R, S123C, T124A, G193E, D256E  
PT14592_1_62.5 ISO14592_1_62.5 Unknown   E157Q L101I, T112V, T124A, T125A, G134D, I135V, K136T, V150A, K160Q, V201I, T206S, Q216H, L234I  
PT14667_1_10.3 ISO14667_1_10.3 Unknown    D6E, E10D, S17N, L28I, P30A, L101I, S119P, I135V, K136N, D256E  
PT14667_1_16.3 ISO14667_1_16.3 Unknown    K14R, A91E, L101I, S119R, T122I, T124A, K136Q, T206S  
PT14667_1_17.3 ISO14667_1_17.3 Unknown    V201I, T218I, L234I, S255G, R269K, D278A, S283G  
PT14667_1_2.4 ISO14667_1_2.4 Unknown    E11D, K14R, R20K, L28I, S39C, L68E, I72V, L101I, T112I, T124N, G193E, V201I, I220V, S230N, L234I, D286N  
PT14667_1_29.5 ISO14667_1_29.5 Unknown    D6E, E11Q, K14R, S24N, D25E, V31I, L45V, I60V, I84M, F100Y, L101I, T112V, I113L, T124A, T125A, V201I, K215N, T218L, L234I, R269K, D278A, S283G  
PT14667_1_30.3 ISO14667_1_30.3 Unknown    E11D, S24N, D25E, K34R, M50I, I72V, F100Y, L101I, T112V, T125A, K136Q, V201I, T218I, L234I, D278A, S283G  
PT14667_1_31.3 ISO14667_1_31.3 Unknown    D6E, K14R, D25E, K42R, L45Q, I72V, I84M, L101V, T112V, T124A, K136Q, V201I, L234I, M275V, D278A, S283G  
PT14667_1_32.4 ISO14667_1_32.4 Unknown    K14R, D25E, V31I, M50T, F100Y, L101I, G106A, T112V, T124A, T125A, K136H, V201I, K211N, T218I, L234I, N254K, I268L, R269K, D278A, S283G, R284G, D288N  
PT14667_1_34.3 ISO14667_1_34.3 Unknown    E11D, S17C, L45I, S119P, T122I, T124A, R187K, K188R, I220L, N254Q, D256E  
PT14667_1_35.3 ISO14667_1_35.3 Unknown    E11D, S24N, V201I, D232E, D253E  
PT14667_1_36.3 ISO14667_1_36.3 Unknown    E11D, R20K, A23T, D25E, L28I, L101I, G193E, A205T, I208L, T218S, D286N  
PT14667_1_37.3 ISO14667_1_37.3 Unknown    D3E, A38R, L45Q, T115X, S123C, T124N, V201I, K219T, I220L  
PT14667_1_38.4 ISO14667_1_38.4 Unknown    K14R, V31I, M50I, L101I, T112V, T124S, G134D, K136T, V201I, T206S, L234I, D256E, A265V, V281M, S283G  
PT14667_1_39.4 ISO14667_1_39.4 Unknown    E11D, S24N, D25E, V31I, M50T, Q95N, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, T218L, K219Q, L234I, D278A, S283G  
PT14727_1_40.3 ISO14727_1_40.3 Unknown    D6E, E10D, E11D, E13D, L101I, I113V, T124A, T125A, K156N, S230N, D256E  
PT14727_1_41.4 ISO14727_1_41.4 Unknown    K7R, D25E, V31I, M50I, L101I, T112V, T124N, K136Q, V201I, I220L, Y227F, L234I, R269K, D278A, V281M, S283G, D288N  
PT14727_1_42.3 ISO14727_1_42.3 Unknown    D25E, L45Q, M50I, I72V, F100Y, L101I, T112V, S119T, T125A, V201I, L234I, D270H, D278A, S283D  
PT14727_1_44.3 ISO14727_1_44.3 Unknown    V31I, L63I, L74I, T112I, T124A, T125A, G163E, V201I, T206S, L234H, N254K, I267V, R269K  
PT14727_1_45.3 ISO14727_1_45.3 Unknown    K14R, V31I, K42Q, L101I, K111R, T112V, T124A, T125A, G134S, K136Q, V201I, T218I, L234I, S255N, D256E, R269K, D278A, S283G  
PT14727_1_46.4 ISO14727_1_46.4 Unknown    E11D, K14R, S24N, V31I, L63I, L74I, Y99F, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218I, L234I, D256E, S283G  
PT14727_1_49.3 ISO14727_1_49.3 Unknown    V31I, F100Y, L101I, T112V, T124N, T125A, G163E, V201L, I204L, A205T, K215N, T218L, L234I, D270E, D278A, S283G  
PT14727_1_50.3 ISO14727_1_50.3 Unknown    K14R, A21T, V31I, I72V, I84L, T112V, I113V, T124A, T125A, V126F, G134N, I135V, D167E, V201I, K211R, K219N, N222K, S230N, L234I  
PT14727_1_51.3 ISO14727_1_51.3 Unknown    E11D, K14R, A21T, V31I, I72V, I84M, T112V, T124A, T125A, G134N, I135V, D167E, V201I, I208L, L234I, S283G  
PT14727_1_53.3 ISO14727_1_53.3 Unknown    D6S, K7E, E10D, A21S, V31I, V32I, I72V, S119P, T122I, T125A, V201I, T206S, I217T, S255T  
PT14727_1_54.7 ISO14727_1_54.7 Unknown    S17N, D25E, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, A205S, T218I, L234I, D278A, S283G  
PT14727_1_55.3 ISO14727_1_55.3 Unknown    K14R, A21T, V31I, S39N, I72V, T112V, T124N, T125A, V126L, G134N, I135V, K136R, D167E, V201I, T206S, L234I, S283N  
PT14727_1_59.4 ISO14727_1_59.4 Unknown    E11D, V31I, V32I, M50T, K111T, E198Q, V201I, I208L, K211R  
PT14727_1_60.3 ISO14727_1_60.3 Unknown    K14R, A21T, E35Q, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136H, D167E, V201I, L234I, S283G, R284G  
PT14727_1_62.3 ISO14727_1_62.3 Unknown    K7Q, K14R, L101I, T112I, T124A, T125A, K136Q, D167E, V201I, I203M, I220V, L234I, N254K, S255G, S283G  
PT14727_1_63.3 ISO14727_1_63.3 Unknown    E11D, S17T, K34R, I72V, T125A, V126L, I135V, D256E, S283G  
PT14727_1_65.3 ISO14727_1_65.3 Unknown    E11D, S24N, D25E, K34R, M50I, I72V, F100Y, L101I, T112V, T125A, K136Q, V201I, T218I, L234I, D278A, S283G  
PT14727_1_66.3 ISO14727_1_66.3 Unknown    L28I, S39C, L101I, T122I, I135V, F181L, I203M, I208L, A265V  
PT14727_1_67.3 ISO14727_1_67.3 Unknown    K14R, S17N, V31I, L74I, L101I, T112V, S119P, T124A, T125A, K136T, G163E, V201I, T206S, T218I, L234I, S255N, D256E, R269K, D278G, S283G  
PT14727_1_68.6 ISO14727_1_68.6 Unknown    K14R, R20K, V31I, L101I, T112V, S119T, T124A, T125A, G134N, K136T, V201I, T206S, L234I, S283G  
PT14727_1_69.3 ISO14727_1_69.3 Unknown    E11D, K14R, A21T, S24A, L45V, I72V, T218I, L234I  
PT14727_1_70.3 ISO14727_1_70.3 Unknown    D6E, E10D, E11D, A21T, A23V, P90S, A91S, L101I, S119R, T124A, I203M, D256E  
PT14727_1_71.3 ISO14727_1_71.3 Unknown    K14R, V31I, I72V, G106A, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, V201L, K219N, N222K, L234I  
PT14727_1_75.3 ISO14727_1_75.3 Unknown    E11D, L28I, S39C, L101I, T122I, I135V, F181L, I203M, I208L  
PT14727_1_76.3 ISO14727_1_76.3 Unknown    E11D, S24N, M50I, I60V, A98G, L101I, T112I, T124S, K136Q, V201I, K215N, T218I, L234V, L242I, D256E, S283G, D286N  
PT14727_1_77.3 ISO14727_1_77.3 Unknown    E11D, S39C, M50T, L101I, K111Q, T122I, T124N  
PT15171_1_10.3 ISO15171_1_10.3 Unknown    S17N, I72V, S119P, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
PT15171_1_11.3 ISO15171_1_11.3 Unknown   E157Q K14R, S24N, S39C, L101I, T112V, T124A, T125P, G134N, I135V, K136T, V201I, T206S, L234I  
PT15171_1_12.3 ISO15171_1_12.3 Unknown    E10D, I72V, T124A, T125A, V126L, I135V, K219N, N222K  
PT15171_1_13.3 ISO15171_1_13.3 Unknown    E11D, L28I, V37I, S39C, E96D, L101I, T125V, K156N, V201I, T206S, N254K, R284G  
PT15171_1_15.3 ISO15171_1_15.3 Unknown    K14R, A21S, V31I, M50I, I72V, T112V, T124A, T125A, V126M, K136Q, G163A, D167E, G193E, V201I, I208M, L234I, I251L, S255N, S283G, D286N  
PT15171_1_17.3 ISO15171_1_17.3 Unknown    V31I, M50I, L101I, T112I, T124N, G134N, V201I, T206S, L234I, S255N, D256E, A265V, I268L, S283G  
PT15171_1_18.3 ISO15171_1_18.3 Unknown    K14R, L28I, P30S, K34R, D55N, I60V, I72V, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, D256E, M275V, S283G  
PT15171_1_19.3 ISO15171_1_19.3 Unknown    K7Q, E11D, D25E, V31I, V88I, F100Y, L101I, T112V, S119P, T124N, T125A, K136Q, S195T, V201I, T218I, L234I, R269K, D278A, S283G  
PT15171_1_2.3 ISO15171_1_2.3 Unknown    E11D, V31I, V32I, L45V, L101I, T112R, T124G, T125A, G134D, K136Q, G193D, S195C, V201I, I203M, T206S, I208L, T218I, L234V, D256E  
PT15171_1_20.3 ISO15171_1_20.3 Unknown   E157Q E11D, S24N, V31I, L63I, L74I, T112V, T124S, T125A, G134N, K136T, G163E, D167E, V201I, T206S, I220V, L234I, S283G  
PT15171_1_22.3 ISO15171_1_22.3 Unknown    V31I, L45Q, L101I, T112V, T124A, T125A, G134D, K136Q, D167E, V201I, L234I, V249I  
PT15171_1_24.3 ISO15171_1_24.3 Unknown    E11D, E13D, Y99F, L101I, S119P, T122I  
PT15171_1_25.4 ISO15171_1_25.4 Unknown    E11D, V31I, I72V, T122I, T124N, M154L, V201I, Q216R, K219T E92D 
PT15171_1_26.3 ISO15171_1_26.3 Unknown    K14R, V31I, S57G, E96D, L101I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234V, R269K, S283G  
PT15171_1_3.5 ISO15171_1_3.5 Unknown    K14R, R20K, I72V, I113V, T124A, V201I, T206S, T218S, S283G, R284G  
PT15171_1_31.3 ISO15171_1_31.3 Unknown    S39N, S119P, T122I, T124N, T125A, A205S, K219N, N222K  
PT15171_1_32.3 ISO15171_1_32.3 Unknown    S17N, V31I, I72V, K111T, T124S, V201I, T206S, D253E, D256E, S283G  
PT15171_1_33.5 ISO15171_1_33.5 Unknown   G163R E11D, E13D, L28I, V37I, L45I, V54I, I84L, L101I, S119T, T124A, T125A, G134D, K136Q, V201I, K211R, E212L, T218I, L234V, D256E, S283G  
PT15171_1_35.4 ISO15171_1_35.4 Unknown    M50I, A91E, L101I, K111Q, S119R, T122I, T124N, T125A, T206S  
PT15171_1_38.3 ISO15171_1_38.3 Unknown    V31I, M50I, I72V, F100Y, L101I, T112V, S119P, T124A, T125A, K136Q, V201I, T206S, T218L, K219Q, L234I, R269K, D278A, S283G, D288N  
PT15171_1_4.3 ISO15171_1_4.3 Unknown    K14R, A21T, V31I, T112V, S119R, T124N, T125A, G134N, I135V, K136R, M154I, D167E, V201I, I203M, L234I, S283G  
PT15171_1_40.3 ISO15171_1_40.3 Unknown    S17N, L45Q, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I  
PT15171_1_41.3 ISO15171_1_41.3 Unknown   G163R E11D, E13D, L28I, V37I, L45I, V54I, I84L, L101I, S119T, T124A, T125A, K136Q, V201I, K211R, T218I, L234V, D256E, S283G  
PT15171_1_42.3 ISO15171_1_42.3 Unknown    E11D, R20K, M50I, L101I, K111R, T112M, S119P, T125A, I135V, F181L, V201I, T218I, D256E, D279G, R284G  
PT15171_1_43.3 ISO15171_1_43.3 Unknown    E11D, S24N, D25E, V31I, M50I, I72V, F100Y, L101I, T112V, S119P, T125A, K136Q, V201I, T206S, T218I, L234I, R269K, D278A, S283G  
PT15171_1_44.3 ISO15171_1_44.3 Unknown    E11D, A21T, V32I, I72V, T112M, I113V, S119T, T124A, T125A, V126F, G134N, I135V, D167E, V201I, K211R, K219N, N222K, L234I, S283G  
PT15171_1_6.3 ISO15171_1_6.3 Unknown    E11D, A21T, V32I, I72V, K111R, T112M, I113V, S119T, T124A, T125A, V126F, G134N, I135V, D167E, V201I, K211R, K219N, N222K, L234I, S283G  
PT15171_1_7.5 ISO15171_1_7.5 Unknown    K14R, M50I, A91E, L101I, K111Q, S119R, T122I, T124N, T125A, T206S, D256E, S283G  
PT15171_1_8.3 ISO15171_1_8.3 Unknown    D25E, V31I, L101I, T112V, T124A, T125A, K136Q, D167E, T206S, T218I, Q221H, L234I  
PT15228_1_45.4 ISO15228_1_45.4 Unknown    E11D, R20K, L101I, S119P, T124A, V201I, E212T, K215N, D256E  
PT15228_1_46.3 ISO15228_1_46.3 Unknown    D25E, V31I, L101I, T112V, I113L, S119P, T124A, T125A, K136Q, V201I, K215N, Q216K, T218L, K219Q, L234I, D278A  
PT15228_1_50.3 ISO15228_1_50.3 Unknown    L101I, T112V, T125A, G134N, I135V, K136T, V201I, T206S, L234I, R269K, S283G, R284G, D286N  
PT15228_1_51.3 ISO15228_1_51.3 Unknown    S17N, L45M, M50L, I72V, G106A, T112I, I113V, T124A, T125A, V126L, V201I, N222H, L234V, D256E  
PT15228_1_52.3 ISO15228_1_52.3 Unknown    K14R, S17N, L28I, T93N, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, D256E, K273Q, S283G, D288N  
PT15228_1_56.4 ISO15228_1_56.4 Unknown    I72V, I84M, T124A, V201I, K219N, N222K  
PT15228_1_57.3 ISO15228_1_57.3 Unknown    R20K, D25E, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, G163E, V201I, A205S, D207E, L234I, D278A, S283G  
PT15228_1_59.3 ISO15228_1_59.3 Unknown    V31I, I72V, L74I, G106A, T112V, I113V, S119P, T124S, T125A, G134D, K136Q, D167E, F181L, V201I, T218I, L234I, S255N  
PT15228_1_61.3 ISO15228_1_61.3 Unknown    E11D, A21T, I72V, T112V, S119P, T124S, T125A, G134N, I135V, D167E, V201I, L234I, S283G  
PT15228_1_62.3 ISO15228_1_62.3 Unknown    K14R, V31I, L101I, T112V, S119G, T122I, T124A, T125A, K136T, V201I, I203M, T206S, K215N, L234I, S255N, D256E, S283G, D288N  
PT15228_1_67.4 ISO15228_1_67.4 Unknown    E11D, V31I, V37I, I84L, L101I, K111T, S119G, T122I, T124N, I203M, N254S, S255G, D256E, V281M  
PT15228_1_68.4 ISO15228_1_68.4 Unknown    E10D, E11D, S24N, F26Y, V31I, M50I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, D278A, S283D  
PT15228_1_69.3 ISO15228_1_69.3 Unknown    E10D, D25E, V31I, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, A265V, D278A, S283G  
PT15228_1_70.3 ISO15228_1_70.3 Unknown    K14R, V31I, S39C, I72V, L74V, L101I, T112R, S119P, T124A, T125A, G134S, K136T, V201I, T206S, L234I, S283G, R284G  
PT15228_1_71.3 ISO15228_1_71.3 Unknown   T97A K14R, V31I, S57G, I72V, L101I, T112I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, K211R, T218I, L234I, N254K, S283G  
PT15228_1_72.3 ISO15228_1_72.3 Unknown    S17N, M50L, I72V, T112V, I113V, T124A, T125A, V201I, T218I, L234I, D256E, A265V  
PT15228_1_75.4 ISO15228_1_75.4 Unknown    S17N, M50L, I72V, T112I, I113V, T125V, G163A, V201I, T206S, I208L, L234I, D256E  
PT15228_1_76.3 ISO15228_1_76.3 Unknown    S17N, S24N, K111R, T112A, S119T, T124S, T125A, V201I, T218S  
PT15228_1_77.3 ISO15228_1_77.3 Unknown    K14R, V31I, K34R, M50I, I72V, L101I, T112V, T124A, I135V, K136Q, V201I, Y227F, L234I, S255G, D278A, S283G  
PT15228_1_79.3 ISO15228_1_79.3 Unknown    K14R, R20K, M50L, A91S, L101I, T112V, I113V, T124A, T125A, G134N, K136Q, S195T, V201I, K219N, N222K, L234I, D278N, S283G  
PT15228_1_80.3 ISO15228_1_80.3 Unknown    E11D, S24N, D25E, V31I, M50T, L101I, T112V, T122I, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A, V281M  
PT15228_1_83.3 ISO15228_1_83.3 Unknown    K14R, V31I, V32I, S39C, M50I, I72V, L74M, T112V, T124A, T125A, G134D, I135V, V201I, T206S, L234I, N254K, R269K, S283G