Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kostaki (2018)
Title Molecular Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Infected Individuals in a Network-Based Intervention (Transmission Reduction Intervention Project): Phylogenetics Identify HIV-1-Infected Individuals With Social Links.
Citation J Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 117
NumPts 117
Subtype G, CRF35_AD, B, A, B + CRF02_AG

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 117 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
TRIP_1006 TRIP_1006 None    T12E, K14R, I15V, E35D, R41K, R57K, D60E, L63P  
TRIP_1031 TRIP_1031 None    L10I, I13V, I15ILV, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1038 TRIP_1038 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_1050 TRIP_1050 None    T12A, K14R, I15V, E35D, R41K, R57K, D60E, L63P  
TRIP_1055 TRIP_1055 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, L63P, H69K, V82I, L89M  
TRIP_1071 TRIP_1071 None    T12P, I13V, K20R, E35D, M36I, R41K, R57K, D60E, C67Y, G68E, H69K, L89M  
TRIP_1079 TRIP_1079 None    T12A, K14R, I15V, E35D, R41K, R57K, D60E, L63P, C67CY, I85IV  
TRIP_1122 TRIP_1122 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, R57RK, H69K, V82I, L89M  
TRIP_1179 TRIP_1179 None    L10I, V11I, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
TRIP_1212 TRIP_1212 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1215 TRIP_1215 None    E34D, E35D, R41K, R57K, D60E, L63P, V77I  
TRIP_1227 TRIP_1227 None    L10I, I13V, I15LV, K20I, E35D, M36I, R41K, H69K, V82I, L89M, T91X  
TRIP_1234 TRIP_1234 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1278 TRIP_1278 None    L10I, I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1281 TRIP_1281 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1332 TRIP_1332 None    I13IV, E35D, M36I, R41K, H69K, L89M, I93L  
TRIP_1351 TRIP_1351 None    T12X, K14R, I15V, E35D, M36MI, R41K, R57K, D60E, Q61QK, I62IV, L63PS, E65D  
TRIP_1358 TRIP_1358 None    T12P, I13V, L19Q, K20R, E35N, M36I, R41K, R57K, C67Y, H69K, L89M, T91IV  
TRIP_1371 TRIP_1371 None    L10I, V11L, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70KR, L89M  
TRIP_1428 TRIP_1428 None    L10I, I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1429 TRIP_1429 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1446 TRIP_1446 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, R57RK, I64IM, H69K, V82I, L89M  
TRIP_1449 TRIP_1449 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_1482 TRIP_1482 None    T12AE, K14R, I15IV, E35D, R41K, R57K, D60E, L63P  
TRIP_1485 TRIP_1485 None    L10I, E35D, R41K, R57K, D60E, L63P, C67S, V77I  
TRIP_1498 TRIP_1498 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1502 TRIP_1502 None    L10I, I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1517 TRIP_1517 None    T12PS, I13V, L19Q, K20R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
TRIP_1541 TRIP_1541 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1542 TRIP_1542 None    L10I, I13V, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1546 TRIP_1546 None    L10I, I13V, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1562 TRIP_1562 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1578 TRIP_1578 None    I13V, K14R, E35D, M36I, N37D, R41K, H69K, K70R, L89M  
TRIP_1585 TRIP_1585 None    L10I, I13V, I15IL, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1616 TRIP_1616 None    I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M  
TRIP_1617 TRIP_1617 None    L10V, I13V, E35D, N37T, R41K, D60E, L63P, V77I  
TRIP_1621 TRIP_1621 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_1627 TRIP_1627 None    I13V, I15V, G16GE, K20I, E34EK, E35D, M36I, R41K, L63X, C67CY, H69K, V82I, L89M  
TRIP_1633 TRIP_1633 None    L10I, I13V, I15IL, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1638 TRIP_1638 None   Q58E K14KR, E34D, E35D, R41K, R57K, D60E, L63P, V77I  
TRIP_1650 TRIP_1650 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_1652 TRIP_1652 None    T12E, K14R, I15V, E35D, R41K, R57K, D60E, Q61H, L63P, E65D, V77I  
TRIP_1672 TRIP_1672 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1696 TRIP_1696 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, K45KR, R57K, L63LP, H69K, L89M  
TRIP_1700 TRIP_1700 None    T12A, K14R, I15V, E35D, R41K, R57K, D60E, L63P  
TRIP_1706 TRIP_1706 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1711 TRIP_1711 None    L10V, I13V, I15V, E35D, M36I, R41K, R57K, L63T, E65D, H69K, L89M  
TRIP_1716 TRIP_1716 None    L10I, I13V, I15L, K20I, E34EK, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1754 TRIP_1754 None    T12E, K14R, I15V, E35D, R41K, R57K, D60E, L63P  
TRIP_1759 TRIP_1759 None    L10I, I13V, K14G, G16E, K20I, M36I, R41K, L63S, C67Y, H69K, K70R, L89M  
TRIP_1764 TRIP_1764 None    L10I, I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1778 TRIP_1778 None    L10I, I13V, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1814 TRIP_1814 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1825 TRIP_1825 None    I13V, K14R, E35D, M36I, N37S, R41K, K45R, R57K, L63T, H69K, L89M  
TRIP_1834 TRIP_1834 None    L10I, I13V, I15IV, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_1902 TRIP_1902 None    E34D, E35D, R41K, R57K, D60E, L63P, V77I  
TRIP_2033 TRIP_2033 None    L10I, I13V, I15ILV, K20I, E35D, M36I, R41K, L63LV, H69K, V82I, L89M  
TRIP_2038 TRIP_2038 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, L63LP, C67X, H69K, L89M  
TRIP_2173 TRIP_2173 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_2334 TRIP_2334 None    T12TP, I13V, I15IL, L19LQ, K20IMR, E35D, M36I, R41K, K43KR, R57RK, C67CY, H69K, V82VI, L89M  
TRIP_2609 TRIP_2609 None    L10I, V11I, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
TRIP_2692 TRIP_2692 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M, T91S  
TRIP_2728 TRIP_2728 None    T12TP, I13V, I15IV, L19LQ, K20X, E35D, M36I, R41K, R57RK, C67CY, H69K, V82VI, L89M  
TRIP_2950 TRIP_2950 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, K45KR, R57K, I62IV, C67HY, H69K, L89M  
TRIP_3509 TRIP_3509 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_3712 TRIP_3712 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_4232 TRIP_4232 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, L89M  
TRIP_4244 TRIP_4244 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_4341 TRIP_4341 None    T12A, K14R, I15V, E35D, R41K, R57K, D60E, L63P  
TRIP_4600 TRIP_4600 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_4682 TRIP_4682 None    T12E, K14R, I15V, L19I, E35D, R41K, R57K, D60E, I62IV, L63P, C67S, V77I  
TRIP_5108 TRIP_5108 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, L63P, C67HY, H69K, L89M  
TRIP_5328 TRIP_5328 None    I13V, I15IV, E35D, M36I, R41K, L63P, H69K, V77I, L89M  
TRIP_5363 TRIP_5363 None    L10I, I13V, I15IL, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_5405 TRIP_5405 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_5619 TRIP_5619 None    L10I, V11L, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
TRIP_5783 TRIP_5783 None    T12P, I13V, L19Q, K20R, E35N, M36I, R41K, R57K, C67Y, H69K, L89M, T91V  
TRIP_6025 TRIP_6025 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, V82I, L89M H69E 
TRIP_6065 TRIP_6065 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_6477 TRIP_6477 None    L10I, V11VI, T12TI, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
TRIP_6573 TRIP_6573 None    T12TP, I13IV, K14KI, Q18QE, L19LQ, K20KR, E35D, M36MI, R41RK, R57RK, I62IV, L63LP, E65ED, C67CY, H69X, A71AT, I72IV, L89M  
TRIP_6695 TRIP_6695 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, L63LP, C67CY, H69K, L89M  
TRIP_7020 TRIP_7020 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_7329 TRIP_7329 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_7441 TRIP_7441 None    T12TA, K14KR, I15LV, K20KIM, E35D, M36MI, R41K, R57RK, D60DE, L63LP, H69X, V82VI, L89M  
TRIP_7734 TRIP_7734 None    T12P, I13V, L19Q, K20R, E35DN, M36I, R41K, K45KR, R57K, C67Y, H69K, L89M  
TRIP_7810 TRIP_7810 None    L10I, I13V, I15L, K20I, E21Q, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_8226 TRIP_8226 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, R57K, H69K, V82I, L89M  
TRIP_8309 TRIP_8309 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_8352 TRIP_8352 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_8390 TRIP_8390 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_8634 TRIP_8634 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_8663 TRIP_8663 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M, T91S P81PL 
TRIP_8846 TRIP_8846 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_8952 TRIP_8952 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57RK, L63LP, H69K, V82VI, L89M  
TRIP_9222 TRIP_9222 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, C67Y, H69K, L89M  
TRIP_9321 TRIP_9321 None    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, R57K, L63LP, C67CY, H69K, L89M  
TRIP_9398 TRIP_9398 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_9726 TRIP_9726 None    L10I, I13V, I15L, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TRIP_9795 TRIP_9795 None    L10I, V11L, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M