Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Reis (2017)
Title Characterization of HIV-1 CRF90_BF1 and putative novel CRFs_BF1 in Central West, North and Northeast Brazilian regions.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 11
NumPts 11
Subtype B

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
BRG04141 BRG04141 Unknown Unknown   K20R, V35T, E40D, K49R, V60I, D123E, D177E, Q207D, R211K, V245I, K277R, T286A, V292I, E297K, T386I, K390R, A400T, T403I, L452LS, S468P, A554S  
BRGO3027 BRGO3027 Unknown Unknown  K103N K20R, T27P, V35I, V90I, K122E, I135T, A158T, G196E, T200A, Q207E, R211K, V245M, L295M, A376S, V381I, T386I, K390R, T403V, S468P, H483Y, I506L, A534S, A554S  
BRGO3047 BRGO3047 Unknown Unknown M184V K103N V35T, V60I, K102R, I135V, I178M, Q207E, R211K, V292I, G335N, M357T, A376T, T386I, A400T, H483Q, Q509H, K527N, A554S  
BRGO3059 BRGO3059 Unknown Unknown   V35T, T39Q, E40D, I135V, K173E, Q207K, R211T, V245T, V292I, K311R, I329L, M357V, A376S, I380V, T386I, T403I, L452S, A554S  
BRGO3145 BRGO3145 Unknown Unknown   K20R, V35T, E40D, K122E, I178L, Q207A, V245M, P294T, V317T, Q334L, K366R, A376T, S379C, T386I, L517V, S519N, K527Q, A554S  
BRGO4188 BRGO4188 Unknown Unknown M184V E138A K20R, V35I, S48T, K82R, A98S, I135L, T200A, Q207E, R211K, A272Q, K277R, V292I, I293V, K350R, A371V, T377S, T386I, S468P, H483N, K512Q, K528R, E529K, G541R, V548I, A554S  
BRGO6043 BRGO6043 Unknown Unknown   K20R, V35T, D123E, I135V, K166R, D177E, Q207E, R211K, V245M, I293V, H315Q, V317M, I329V, Q334L, T386I, V435I, L517I, S519N, K527Q, A554S  
BRGO6048 BRGO6048 Unknown Unknown   K20R, I135T, Q174H, Q207D, R211K, V245M, D250E, A272P, K275Q, V276I, V292I, D324E, Y339F, I341V, T369A, Q373N, T377M, V381I, T386I, A400V, T403M, H483N, S519N  
BRGOAP801 BRGOAP801 Unknown Unknown M41L, T215S  K20R, V35T, V60I, V90I, K122E, K166R, E169D, Q207E, R211K, V245M, K277R, V292I, I293V, P294T, E297A, K347KR, R358K, V381I, T386I, K390R, Q394K, T470A, H483Y, L517I, K527N, A554S  
BRMT508 BRMT508 Unknown Unknown   K20R, V35T, E44D, W88C, V118I, I142V, T165V, I202V, Q207E, R211K, E248D, A272P, V292I, I329V, Y339F, T386I, T403V, T470A, D471E, L491S, A508S, L517W, S519N, V531I, A554S  
BRTO10_66 BRTO10_66 Unknown Unknown   K20R, V35T, K49R, V60VI, D123E, I135T, S162A, D177E, Q207E, R211K, V245E, S251N, K277R, T286A, V292I, T377L, S379G, T386I, W401C, W402G, T403A, T470NS, D471N, A554S  

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