Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Bracho (2014)
Title Emerging trends in CRF02_AG variants transmission among men who have sex with men in Spain.
Citation JAIDS
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 41
NumPts 41
Subtype CRF02_AG, A, D, CRF06_cpx

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
01150434 01150434 Unknown Unknown   V35T, K102R, I135L, S162A, K173T, Q174K, D177E, I178V, G196E, T200A, Q207G, R211N, V245Q, K281R, T286A, I293V, P294T, S322T, G335D  
04133825 04133825 Unknown Unknown  V106I V35T, E36D, T39M, V60I, D123E, I135T, S162A, K173A, Q174K, D177E, I178L, V179I, Q207A, F214L, V245Q, D250E, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D  
11376596 11376596 Unknown Unknown   K20R, V35T, V60I, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, P243H, V245Q, T286A, E291D, V292I, I293V, V317A, S322A, G335D  
14106694 14106694 Unknown Unknown   V35T, E36D, K122E, D123T, I135V, S162A, E169N, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248N, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D  
15052079 15052079 Unknown Unknown   V35IR, V60I, I135L, S162W, V179I, Q207E, R211G, V245Q, R284K, T286A, E291D, I293V  
19750683 19750683 Unknown Unknown   V21I, V35T, V60I, K122Q, S162A, K173A, Q174K, D177E, G196E, T200A, I202V, Q207E, V245Q, T253S, T286A, E291D, V292I, I293V, P294T, S322T, G335D  
20614916 20614916 Unknown Unknown   V35T, E36EK, K43S, I135V, S162A, K173T, Q174K, D177E, G196A, E203Q, Q207E, R211K, V245M, T286A, E291ED, V292I, I293V, P294A, S322A, D324E, I326V, G335D  
21754717 21754717 Unknown Unknown   P4S, V35T, K102R, I135V, S162A, E169Q, K173T, Q174N, D177E, T200A, E203Q, Q207D, R211A, F214L, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, P294T, S322T, I326V, Q334P, G335D  
26618155 26618155 Unknown Unknown   V35T, I135V, S162A, K173A, Q174K, D177E, I178IM, T200A, E203ED, Q207AE, R211KM, V245Q, K249Q, K277Q, T286A, E291D, V292I, I293V, P294V, L310LI, S322T  
26755339 26755339 Unknown Unknown   E6K, K11T, V35T, E36A, T39K, K43E, K122E, D123G, I142V, S162H, K173S, Q174K, D177E, V179I, T200A, Q207D, V245Q, K277T, T286A, E291D, V292I, I293V, E312D, Q334N, G335D  
28130847 28130847 Unknown Unknown   V35A, S162A, K173T, Q174K, D177E, I178M, T200A, Q207D, P243T, V245Q, E248K, D250E, R284K, T286A, E291D, I293V, P294V, S322T, G335D  
28228596 28228596 Unknown Unknown   V35T, E36D, E40D, K122E, D123Q, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, V245T, D250E, K281R, T286A, E291D, V292I, I293V, P294T, R307K, S322T, G335D  
29346294 29346294 Unknown Unknown   E6K, V35T, E36D, T39M, G45E, K49R, D123E, I135V, S162A, K173T, Q174R, D177E, T200A, Q207E, R211K, V245Q, K277R, T286A, K287Q, E291D, V292I, I293V, P294T, S322T, G335D E248Y 
29892406 29892406 Unknown Unknown   V35T, E36ED, K122E, I135V, S162A, K173I, Q174K, D177E, I178M, T200A, Q207E, P243H, V245E, E248D, A272P, K275R, T286A, E291D, V292I, I293V, S322T, I326V, G335D  
31572644 31572644 Unknown Unknown   K32R, V35T, E36EA, V60I, K64R, T69S, K122E, S163ST, Q174K, D177E, I178M, T200V, R211K, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, E297T  
32291679 32291679 Unknown Unknown   V35T, K64KR, T69S, K122E, S162A, K173T, Q174K, D177E, T200A, I202V, Q207N, R211K, F214L, V245Q, E248D, E291D, V292I, I293V, P294T, S322A, D324E, G335D  
33910237 33910237 Unknown Unknown   V35T, T39M, K102R, I135V, S162A, E169Q, K173T, Q174N, D177E, T200A, Q207E, R211A, F214L, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, I326V, Q334P, G335D  
35871153 35871153 Unknown Unknown  V179E V35T, V60I, S68G, D123E, I135R, S162A, K173T, Q174K, D177E, I178IM, T200A, I202V, Q207K, R211H, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, E312Q, S322T, I326V, I329V, Q334P, G335D  
36644558 36644558 Unknown Unknown   V35T, K102Q, D123E, I132IV, I135V, S162A, K173T, Q174K, D177E, I178V, G196E, T200A, Q207G, R211S, V245Q, T286A, I293V, P294T, S322T, I326V, A327V, G335D  
36804498 36804498 Unknown Unknown   K11Q, V35I, E36D, T39A, K122E, D123N, I135L, S162A, K173A, Q174K, D177E, Q207E, R211K, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, S322T, G335D  
46856847 46856847 Unknown Unknown   V35T, T39M, K102R, I135V, S162A, E169Q, K173T, Q174N, D177E, T200A, Q207E, R211A, F214L, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, I326V, Q334P, G335D  
51618287 51618287 Unknown Unknown   V35T, E36D, D123DE, I135V, S162A, K173A, Q174K, D177E, T200A, Q207A, R211K, P243T, V245Q, D250E, K275R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D  
54094266 54094266 Unknown Unknown   V35T, K122T, I135V, S162A, K173V, Q174K, D177E, T200A, Q207N, R211K, V245Q, A272P, T286A, E291ED, I293V, P294T, S322T, I326V, G335D  
55055625 55055625 Unknown Unknown  V108I V35VL, T39A, D123N, I135L, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, L295M, E297K, K311Q, S322T, I326V, G335D  
55259237 55259237 Unknown Unknown   V35I, E36D, T39A, I135L, S162A, K173I, Q174K, D177K, T200A, Q207G, R211Q, V245Q, S251N, K277R, T286A, E291D, V292I, I293V, P294A, S322T, I326V, G335D  
55719263 55719263 Unknown Unknown   V35M, E36D, A62T, A98S, K122E, D123N, S162A, K173T, Q174K, N175NY, T200A, Q207E, V245E, A272P, K275Q, K281R, T286A, E291D, V292I, I293V, S322T, I326V, G335D  
59306954 59306954 Unknown Unknown   V35T, I135V, S162A, K173T, D177E, T200A, Q207E, R211K, F214L, V245E, V261I, K277R, T286A, E291D, I293V, P294T, L310I, S322A, I326V, G335D  
60633833 60633833 Unknown Unknown   V35T, E36D, K122Q, S162A, K173A, Q174R, D177E, T200A, Q207E, V245Q, K281R, T286A, E291D, I293V, P294T, S322A, G335D  
61893839 61893839 Unknown Unknown   V35T, E36D, T39A, D121Y, K122E, I135V, A158S, S162A, K173T, Q174K, P176S, D177E, I178IM, V179VI, T200A, Q207E, R211K, V245E, T286A, E291D, V292I, I293V, P294T, S322T  
66394139 66394139 Unknown Unknown   V35T, E40D, K122P, I135T, S162A, K173T, Q174R, D177E, I178M, T200A, Q207E, V245Q, E248D, A272T, V276I, K281R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D  
67984846 67984846 Unknown Unknown   V35T, T39A, K43N, K101Q, D123E, I135V, I142V, S162A, K173A, Q174N, D177E, T200A, Q207K, L228F, E248D, V276I, T286A, E291D, I293V, P294T, S322T, I326V, G335D  
69834746 69834746 Unknown Unknown   V35T, E36D, K122Q, S162A, K173A, Q174K, D177E, T200V, Q207E, V245Q, K281R, T286A, E291D, I293V, P294T, S322A, G335D  
80292104 80292104 Unknown Unknown   K20R, V35T, T39R, K43E, K122E, D123G, Q145M, S162A, E169D, K173T, Q174K, D177E, V179I, T200A, Q207E, R211K, F214L, V245Q, E248DN, T286A, E291D, V292I, I293V, P294T, E297D, S322A, L325I, I326V, G335D  
82500314 82500314 Unknown Unknown   K20R, V35T, T39AV, E40ED, V60I, D121Y, K122E, I135L, S162A, P170H, K173V, Q174K, D177E, I178M, T200A, Q207E, R211K, V245E, K249R, T286A, E291D, V292I, I293V, S322T  
84364598 84364598 Unknown Unknown  V179E V35T, E40D, V60I, D123E, I135K, S162A, K173T, Q174R, D177E, T200A, I202V, Q207E, R211H, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, E312Q, S322T, I326V, I329V, Q334P, G335D  
84486142 84486142 Unknown Unknown A62V  V35T, V60I, D123E, I135K, S162A, K173T, Q174K, D177E, T200A, I202V, Q207K, R211H, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, E312Q, S322T, I326V, I329V, Q334P, G335D  
84760994 84760994 Unknown Unknown   V35T, V60I, D123E, I135K, S162A, K173T, Q174KR, D177E, T200A, I202V, Q207E, R211H, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, E312Q, S322T, I326V, Q334P, G335D  
86811743 86811743 Unknown Unknown   V35T, T39M, V60I, V90I, S162A, K173T, Q174N, D177EQ, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, S322T, A327V, G335D  
92610735 92610735 Unknown Unknown   V35T, E36D, T39TI, K49R, I50IV, V60I, K122E, I135T, D177E, I178V, Q207E, F214L, V245K, P247A, D250E, A272Q, T286A, E297K, I329V  
94360234 94360234 Unknown Unknown   V35T, K49R, I50V, V60I, I135T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, P243Q, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, S322T, E328D, G335D  
99751427 99751427 Unknown Unknown   V35T, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, S251N, T286A, E291D, V292I, I293V, P294PT, S322T, I326V  

Database

Resources

Team