Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Chimukangara (2016)
Title HIV drug resistance testing among patients failing second line antiretroviral therapy. Comparison of in-house and commercial sequencing.
Citation J Virol Methods
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 25
NumPts 25
Subtype C


Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
NC1 NC1 AZT, 3TC, ABC NVP M41L, M184V, T215F A98G, K103N, E138A P4T, V8I, K20R, V35T, T39E, V118I, K122E, D123S, I135L, S162C, K173A, Q174K, D177E, I178L, T200A, Q207E, R211K, F214L  
NC10 NC10 AZT, 3TC, ABC NVP   K32R, V35T, E36A, T39E, S48T, K122E, D123G, I135T, S162Y, K173A, Q174K, T200A, Q207E  
NC11 NC11 AZT, 3TC, ABC NVP V75M, M184V, T215Y A98G, Y181C, H221Y D17N, K20R, V35T, E36A, T39E, K122E, I135T, K173V, Q174K, D177E, T200A, Q207E, R211K  
NC12 NC12 TDF, 3TC, AZT EFV K65R, M184V L100I, K103N V35T, E36A, T39E, S48T, K122E, D123N, I142IV, K173A, Q174K, T200E, Q207N  
NC13 NC13 ABC, 3TC, TDF NVP K65R, Y115F V106M, E138A, H221Y, F227L K20R, K22R, V35T, T39E, S68N, W88C, V118I, K122E, S162A, T165I, E169Q, K173T, Q174K, N175Y, I178L, T200A, Q207E, R211K, F214L  
NC14 NC14 ABC, 3TC NVP  A98G, V106M, Y181C, G190A E6K, K20R, V35M, T39E, S48T, K122E, D123N, S162A, K173T, Q174K, D177E, I178V, V179I, T200A, I202V, E204D, Q207E, R211K  
NC15 NC15 TDF, FTC, 3TC None D67N, T69D, K70R, M184V, T215F, K219E K103S, Y181C, G190A V35K, E36A, T39E, S48T, V60I, K102R, V118I, K122E, D123G, S162N, K173T, D177E, V179I, T200A, I202V, R206K, Q207E, R211K, F214L, L228H  
NC16 NC16 AZT, 3TC, TDF NVP M41L, V75M, F77L, M184V, T215F K103S, G190A V35T, T39E, S48T, K122E, K173T, Q174K, D177E, V179I, T200E, I202V, Q207K, R211Q, L228R  
NC17 NC17 3TC, D4T, TDF NVP M41L, M184V, T215F K103S, G190A V35T, T39A, E40D, S48T, V60I, K122E, I135L, K173A, T200A, Q207E, R211K  
NC19 NC19 AZT, 3TC, TDF NVP   K20KR, V35T, T39E, E53ED, V60VI, K122E, D123NS, K173IT, Q174K, T200A, Q207E, R211K, F214L  
NC20 NC20 AZT, 3TC, TDF NVP  Y181C V35T, T39E, S48T, V60I, K122E, T139R, K173A, D177E, V179I, G196E, T200A, I202V, Q207A, R211K, L228R H208Q 
NC22 NC22 AZT, 3TC, TDF NVP  G190A V35T, E36A, T39E, S48T, K122E, D123N, K173T, Q174K, D177E, T200A, Q207E  
NC23 NC23 3TC, D4T, TDF NVP  E138A P4T, V35T, T39E, S48T, V118I, K122E, K173T, Q174K, I178V, T200A, Q207E, F214L  
NC25 NC25 TDF, 3TC NVP   V35T, T39E, S48T, K122E, D123N, K173A, D177E, T200A, E203D, Q207E, R211K  
NC27 NC27 TDF, FTC, 3TC None   V35T, T39E, S48T, K122E, D123N, S162C, K173T, Q174R, D177E, I178L, T200A, Q207D, R211K  
NC28 NC28 3TC, D4T, ABC EFV M184V K103N, Y181C, Y188L, H221Y V35L, T39E, S48T, E53D, V90I, K101R, S162N, K173A, I195L, G196E, T200A, I202V, Q207E, L228R  
NC29 NC29 AZT, 3TC, TDF EFV  A98G E28K, K32Q, V35T, T39E, K122E, K173A, D177E, I178M, T200A, E204K, Q207E, R211K  
NC3 NC3 AZT, 3TC, TDF NVP   V35T, E36A, T39E, V60I, K122E, K173A, D177E, T200A, Q207E  
NC30 NC30 AZT, 3TC, ABC NVP  Y181C, H221Y V35R, T39E, S48T, K122E, D123S, S162C, K173A, D177E, I178L, T200A, Q207A, R211K  
NC4 NC4 3TC, D4T, TDF NVP M41L, D67N, V75M, F77L, M184V, L210W, T215Y K103N, E138A K20R, K22R, V35T, T39E, E44D, V60I, W88C, A98S, V118I, K122E, D123N, I135T, I142V, T165L, K173T, V189I, T200A, I202V, Q207E, R211K  
NC5 NC5 AZT, 3TC, TDF NVP   K32KE, V35T, E36A, T39E, S48T, V60I, K122E, D123G, S162A, K173A, Q174K, D177E, I178M, T200A, Q207E, R211K  
NC6 NC6 3TC, D4T, TDF NVP D67N, K70E, V75T, M184V K101E, V106I, E138A, G190A K20R, V35T, E36K, T39E, S48T, K122E, D123N, E169Q, K173T, Q174K, V179I, T200A, I202V, R211K, F214L, L228H  
NC7 NC7 3TC, D4T, TDF NVP D67N, K70R, M184I, K219Q K103N, Y181C P4H, K32R, V35T, T39E, V90I, K122E, D123G, I135T, S162Y, K173A, Q174K, D177E, I178M, G196E, T200A, Q207E, R211K, F214L  
NC8 NC8 AZT, 3TC, ABC, TDF NVP D67S, K70R, M184V, T215F, K219E Y181V, P225H T7A, V35T, E36A, T39D, S48T, V60I, T69N, D121H, K122E, I135T, D177E, V179I, T200A, Q207E, R211K  
NC9 NC9 AZT, 3TC, ABC EFV M41L, A62V, M184V, T215Y A98G, K101E, V106M, Y181C, G190A S3C, V35R, T39D, K43E, S48T, K122E, I167IV, K173A, D177E, V179I, T200A, Q207E, R211K, K223KQ, L228R E44M, S105V