Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Salvana (2014)
Title The changing molecular epidemiology of HIV in the Philippines.
Citation Int J Infect Dis.
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 81
NumPts 81
Subtype CRF01_AE, B, B + CRF01_AE, C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
NIHA_1 NIHA_1 None None   E6D, K11T, V35T, T39K, K43E, V60I, S68G, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, V245E, T286A, E291D, I293V, E297K, A304E, E312T, I326V, I329V, G335D  
NIHA_10 NIHA_10 None None   E6D, V35T, T39K, K43E, V60I, K102R, K122E, D123N, S162C, K173N, Q174K, D177E, T200V, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_11 NIHA_11 None None   V111I, S162A, K166R, V179I, I195P, G196E, Q197K, A272P, V276I, I293V, E312K, S322L, I326V  
NIHA_12 NIHA_12 None None   E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173T, Q174K, D177E, V179I, T200A, Q207A, R211S, K238R, V245E, E291D, V292I, I293V, E312T, I329V, G335D  
NIHA_13 NIHA_13 None None   E6D, V35T, T39K, E40D, K43E, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, T200V, Q207N, R211S  
NIHA_14 NIHA_14 None None   E6D, V35T, T39K, K43E, K122E, D123S, I135T, F160X, Q161X, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, L210F, R211S, K238R, V245E, T286A, E291D, I293V, T296X, E298K, E300K, L303I, A304G, E308K, E312T, D320G, S322T, I329V, G335D E305Q, N306K 
NIHA_15 NIHA_15 None None   E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, Q207A, R211S, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_16 NIHA_16 None None   E6D, V21I, V35T, T39K, K43E, K49R, V60I, K102R, K122E, D123S, K173I, Q174K, D177E, V179I, T200A, E204Q, Q207A, R211S, K238R, V245K, A272G, T286A, E291D, V292I, I293V, P294T, E312T, I326V, I329V, G335D  
NIHA_17 NIHA_17 None None   E6D, V8I, K11T, V21I, V35T, T39K, K43E, V60I, K122E, D123N, K173I, Q174K, D177E, V179I, T200A, E204Q, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_18 NIHA_18 None None   E6D, E28A, V35T, T39K, K43E, V60I, K122E, D123S, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312N, I326V, I329V, G335D  
NIHA_19 NIHA_19 None None  E138G E6D, K11T, V21I, T27S, V35T, T39K, K43E, V60I, K122E, D123N, I135V, K173I, Q174K, D177E, I178M, T200V, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D S105P 
NIHA_2 NIHA_2 None None   V8I, V21I, V35T, T39K, K43E, V60I, K122E, D123S, I135T, S162C, K173I, Q174K, V179I, T200A, E204Q, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_20 NIHA_20 None None   E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173R, Q174K, D177E, I195L, T200A, Q207D, L210M, R211K, K238R, V245E, K275Q, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_21 NIHA_21 None None   E6D, V8I, K11T, V21I, V35T, T39K, V60I, K104R, K122E, D123S, I135T, K173I, Q174K, D177E, V179I, T200A, E204Q, Q207A, R211S, K238R, V245E, A272S, V276I, T286A, E291D, I293V, E312T, I326V, I329V, G335D  
NIHA_22 NIHA_22 None None   E6D, V35T, T39K, K43E, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200V, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_23 NIHA_23 None None   K173E, I195L, G196E, Q197K, S251N, A272S, I293V, E312K  
NIHA_24 NIHA_24 None None   E6D, V35T, T39K, K43E, V60I, S68G, K122E, D123S, K166R, K173I, Q174K, D177E, I178M, T200A, E203D, Q207A, R211S, V245E, A272P, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D T290K, Y339H 
NIHA_25 NIHA_25 None None   E6D, K11T, V35T, T39K, K43E, V60I, S68G, W88C, K102M, K122E, D123N, K173I, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, K238R, V245E, K275Q, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D Y339H 
NIHA_26 NIHA_26 None None   V35I, S105A, K122E, K173E, I195P, G196E, Q197K, Q207E, S251N, A272S, I293V, E312K, S322L, I326V  
NIHA_27 NIHA_27 None None   K102R, S162C, V179I, I195L, G196E, Q197K, Q207R, R211G, S251N, A272S, I293V, E312K, S322L, I326V  
NIHA_28 NIHA_28 None None   E6K, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, A272P, V276I, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_29 NIHA_29 None None   E6D, V35T, T39K, K43E, K104R, K122E, D123S, T165I, K173I, Q174K, D177E, I178M, T200V, Q207A, R211S, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_3 NIHA_3 None None   E6D, V35T, T39K, K43E, V60I, K122E, D123S, I142V, K173I, Q174K, D177E, I178M, T200V, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_30 NIHA_30 None None   E6D, K11S, V35T, T39K, K43E, K122E, D123N, K173I, Q174K, D177E, T200I, Q207A, R211S, K238R, V245E, K281R, L283I, T286A, V292I, I293V, E312T, D324E, I326V, I329V  
NIHA_31 NIHA_31 None None M184V  E6D, V35T, T39K, K43E, G99X, K104R, K122E, D123S, I135K, S162C, K173I, Q174K, D177E, V179I, T200A, Q207A, R211S, K238R, V245E, A272P, T286A, A288G, E291D, V292I, I293V, P294T, E312T, I329V, G335D  
NIHA_32 NIHA_32 None None   E6D, V21I, V35T, T39K, K43E, V60I, K122E, D123N, K173I, Q174K, D177E, I178M, V179I, T200V, Q207A, R211S, K238R, V245E, A272P, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_33 NIHA_33 None None   E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, Q207A, R211S, K238R, V245E, A272P, T286A, A288G, E291D, V292I, I293V, P294T, E312T, I326V, I329V, G335D  
NIHA_34 NIHA_34 None None   E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, L310I, E312T, I326V, I329V, G335D  
NIHA_35 NIHA_35 None None   E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_36 NIHA_36 None None   K166R, K173E, V179I, I195L, G196E, Q197K, I202V, S251N, A272S, V276I, I293V, E312K, I326V  
NIHA_37 NIHA_37 None None   E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, Q197H, T200A, Q207D, R211K, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_38 NIHA_38 None None   E6D, V35T, T39K, K43E, K104R, K122E, D123S, I135R, S162C, K173I, Q174K, D177E, V179I, T200A, Q207A, R211S, K238R, V245E, A272P, T286A, A288G, E291D, V292I, I293V, P294T, E312T, I329V, G335D  
NIHA_39 NIHA_39 None None   E6G, V35T, T39K, K43E, K122E, D123E, S162C, K173I, Q174K, D177E, T200A, E203D, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, R307K, E312T, I326V, I329V, G335D  
NIHA_4 NIHA_4 None None   V60I, Q91H, T107P, P119S, I135T, V179I, I195P, G196E, Q197K, I244V, S251N, A272S, I293V, E312K, D324R, I326V K73R, R125Q 
NIHA_40 NIHA_40 None None   E6D, V35T, T39K, K43E, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200V, Q207A, R211S, K238R, V245E, A272P, T286A, E291D, V292I, I293V, P294Q, E312T, I326V, I329V, G335D Q340K 
NIHA_41 NIHA_41 None None   E6D, K11T, V21I, V35T, T39K, K43E, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_42 NIHA_42 None None   E6D, V35T, T39K, K43E, D123E, K173I, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, P294Q, L310LI, E312T, I326V, I329V, G335D  
NIHA_43 NIHA_43 None None   E6D, V8I, K11T, V21I, V35T, T39K, K43E, V60I, K122E, D123N, K173I, Q174K, D177E, V179I, T200A, E204Q, Q207A, R211S, V245E, A272S, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_44 NIHA_44 None None   E6D, K20R, V35T, T39K, K43E, K49*, N57Y, K102R, K122E, D123S, S162A, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, P294Q, E312T, I326V, I329V, G335D K46I 
NIHA_45 NIHA_45 None None   E6D, V21I, V35T, T39K, K43E, V60I, K122E, D123S, T165I, K173R, Q174K, D177E, I178M, G196E, T200A, E204Q, Q207A, R211S, K238R, V245E, T286A, I293V, E312T, I326V, I329V, G335D  
NIHA_46 NIHA_46 None None   E6D, E28A, V35T, T39K, K43E, K101R, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_47 NIHA_47 None None   E6D, K11T, V21I, V35T, T39R, K43E, V60I, S68G, W88C, T107S, K122E, D123S, R172K, K173I, Q174K, D177E, V179I, T200A, Q207A, R211S, K238R, V245E, T286A, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_48 NIHA_48 None None   V8I, K104R, K173E, V179I, I195L, G196E, Q197K, Q207K, S251N, A272S, I293V, E312K, S322L, Q334L  
NIHA_49 NIHA_49 None None   E6D, K11T, E28Q, V35T, T39K, K43E, V60I, S68G, K122E, D123N, K173T, Q174K, D177E, T200A, Q207A, R211S, K238R, V245E, K275Q, K277R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_5 NIHA_5 None None   K22R, V35T, K122E, D123N, D177E, T200A, I202V, Q207E, F214L, V245Q, A272P, R284K, I293V, E297T, D324E  
NIHA_50 NIHA_50 None None   V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D Q340K 
NIHA_51 NIHA_51 None None   K166R, K173E, V179I, I195L, G196E, Q197K, S251E, A272S, I293V, E312K, I326V  
NIHA_52 NIHA_52 None None   E6D, K11T, V21I, V35T, T39K, K43E, V60I, D121H, K122E, I142V, K173I, Q174N, D177E, I178M, T200A, E204K, Q207A, R211S, K238R, V245E, T286A, V292I, I293V, E297K, E312T, I326V, I329V, Q332P, G335D  
NIHA_53 NIHA_53 None None   S162A, T200I, V245K, I257L, A272P, K277R, T286A, I293V, E297A, R307K, P313S, V317A, G333E, G335S  
NIHA_54 NIHA_54 None None   E6D, K20R, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, G196R, T200A, Q207A, L210M, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_55 NIHA_55 None None   V35T, V60I, K173E, Q174R, I195L, G196E, Q197K, S251N, A272S, E312T, S322L, I326V  
NIHA_56 NIHA_56 None None   E6D, K11T, V35T, T39EK, V60I, S68T, K122E, D123S, K173I, Q174K, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_57 NIHA_57 None None   E6D, V8I, K11T, V35T, T39K, K43E, K122E, D123S, I135V, K173I, Q174K, D177E, I178M, T200V, Q207A, R211S, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_58 NIHA_58 None None  E138G E6D, K11T, V21I, V35T, T39K, K43E, V60I, K122E, D123N, I135V, K173I, Q174K, D177E, V179I, T200E, Q207A, R211S, K238R, V245E, T286A, E312T, I326V, I329V, Q334E, G335D  
NIHA_59 NIHA_59 None None   E6D, K11S, V21I, V35T, T39K, K43E, V60I, V90I, K122E, D123S, K173L, Q174K, D177E, I178M, T200A, Q207A, R211S, K238R, I244V, V245E, K277R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_6 NIHA_6 None None   V35T, V60I, I195L, G196E, Q197K, S251N, A272S, E312K, I326V  
NIHA_60 NIHA_60 None None   K122E, D123S, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, R211S, A272S, V292I, I293V, L310I, E312K, I326V, G333E, Q334H  
NIHA_61 NIHA_61 None None   E6D, V35T, T39K, K43E, V60I, D121H, K122E, D123N, S162A, T200I, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_62 NIHA_62 None None   E6K, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, A272P, V276I, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_63 NIHA_63 None None   E6D, K11T, V35T, T39K, K43E, V60I, S68G, D123N, K173I, Q174K, D177E, I178M, V179I, Q207A, R211S, V245E, T286A, E291D, V292I, I293V, P294T, E312T, I326V, I329V, G335D  
NIHA_64 NIHA_64 None None   E6D, V21I, V35T, T39K, K43E, V60I, K104R, K122E, D123S, S162C, K173T, Q174K, D177E, T200V, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, V317A, I329V, G335D  
NIHA_65 NIHA_65 None None   K11R, K173E, Q174R, I195L, G196E, Q197K, T200A, V245M, A272S, V292I, I293V, E312K, I326V, G335D  
NIHA_66 NIHA_66 None None   K11T, V21I, V35T, T39K, K43E, V60I, D121H, K122E, D123S, K173I, Q174K, D177E, I178M, T200A, Q207A, K238R, V245D, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_67 NIHA_67 None None   K20R, V35T, E36A, T39E, S48T, V60I, K122E, D123S, S162G, K173A, Q174K, D177E, G196E, T200A, Q207E, R211K, V245E, A272P, K277R, E291D, V292I, I293V, Q334K, G335D  
NIHA_68 NIHA_68 None None   K173E, V179I, I195L, Q197K, R211K, S251N, A272S, I293V, E312K, I326V  
NIHA_69 NIHA_69 None None   V35I, D86E, I195P, G196E, Q197K, L210F, I244V, A272S, I293V, E312R, S322L, I326V, G333E  
NIHA_7 NIHA_7 None None   V35T, V60I, D123N, K173I, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, K238R, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_70 NIHA_70 None None   K122E, Q174H, T200E, Q207E, R211K, A272P, K275R, I293V, Q334L  
NIHA_71 NIHA_71 None None   E6D, V35T, T39E, K43E, V60I, K64R, K122E, D123N, K173T, Q174K, D177E, V179I, T200A, E204Q, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_72 NIHA_72 None None   E6D, V35T, T39K, K43E, V60I, V118X, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200V, Q207A, R211S, K238R, V245E, A272P, T286A, E291D, V292I, E312T, I326V, I329V, G335D S117Q 
NIHA_73 NIHA_73 None None  E138G E6D, V35T, T39K, K43E, V60I, K122E, D123S, I135V, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_74 NIHA_74 None None   E6D, V35T, T39K, K43E, K49R, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200V, Q207A, R211S, K238R, V245E, A272P, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_75 NIHA_75 None None  V106I E6D, K11T, V21I, V35T, T39E, V60I, K122E, D123S, K173I, Q174K, D177E, T200V, I202V, Q207N, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_76 NIHA_76 None None   E6D, V35T, T39K, K43E, K122E, S162C, K173I, Q174K, D177E, I178L, T200A, Q207N, R211K, K238R, V245E, A272P, E291D, I293V, E312N, G335D  
NIHA_77 NIHA_77 None None   E6D, V35T, T39K, E40D, K43E, V60I, K122E, D123S, K173I, Q174K, D177E, T200V, E203D, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_78 NIHA_78 None None   E6D, V8I, K11T, V21I, V35T, T39K, K43E, V60I, K122E, D123S  
NIHA_79 NIHA_79 None None   E6D, V21I, E28A, V35T, T39K, K43E, V60I, K102Q, K122E, D123S, S162C, K173I, Q174K, D177E, I195L, T200A, Q207A, R211S, K238R, V245D, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_8 NIHA_8 None None  V106I E6D, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, E203D, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_80 NIHA_80 None None   E6D, K11T, V35T, T39K, K43E, V60I, S68G, V90I, K122E, D123S, K173I, Q174K, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_81 NIHA_81 None None   E6D, V8I, K11T, V21I, V35T, T39K, K43E, V60I, T69P, K122E, D123N, I142V, K173I, Q174K, D177E, V179I, T200A, E204Q, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D  
NIHA_9 NIHA_9 None None   V35I, V179I, I195P, G196E, Q197K, S251N, A272S, I293V, E312K, S322L, I326V  

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