Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Dauwe (2015)
Title Characteristics and spread to the native population of HIV-1 non-B subtypes in two European countries with high migration rate.
Citation BMC Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 410
NumPts 410
Subtype CRF02_AG, CRF01_AE, A, C, G, F, D, CRF09_cpx, CRF45_cpx, CRF18_cpx, B, CRF38_BF, H, CRF12_BF, J, CRF50_A1D, B + F, CRF49_cpx

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 410 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
12_08086 12_08086 None    I15V, E35D, M36I, R41K, R57K, Q61N, E65D, H69Y, I72T  
14_01_73 14_01_73 None    I13V, K14KR, K20I, E35D, M36I, R41K, H69K, V82I, L89M W6W* 
A1_01_71 A1_01_71 None    I13V, I15IV, L23LV, V32VA, E35D, M36I, R41K, H69K, L89M  
A1_02015 A1_02015 None   L89LMV I13V, K14R, E35D, M36I, R41K, I64IV, H69K, I93L  
A1_03057 A1_03057 None    L10V, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63Q, H69K, L89M  
A1_05024 A1_05024 None    I13V, K14R, G16GE, E35D, M36I, R41K, C67CY, H69K, V77I, L89M, I93L  
A1_07103 A1_07103 None    L10I, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M G86GE 
A1_07234 A1_07234 None    L10I, I13V, K14R, E35D, M36I, N37E, R41K, K45R, R57K, H69K, L89M  
A1_08002 A1_08002 None    E35D, M36I, R41K, H69K, L89M, Q92QK, I93IL  
A1_09040 A1_09040 None    I13V, I15IV, G16GE, E35D, M36I, R41K, K45R, H69K, L89M  
A1_10007 A1_10007 None    L10M, I13V, I15V, E35D, M36I, N37D, R41K, R57K, I62V, H69K, L89M  
A1_10035 A1_10035 None    I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70KR, L89M  
A1_10042 A1_10042 None    I13V, I15IV, L19LI, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
A1_10052 A1_10052 None    I13V, I15V, L19I, E35D, M36I, R41K, R57K, I62V, H69K, L89M  
A1_10084 A1_10084 None    E35D, M36I, R41K, R57K, H69K, L89M  
A1_10105 A1_10105 None    L10LI, I13IV, K14KR, E35D, M36I, R41K, R57K, L63PS, H69K, V77I, L89M  
A1_11001 A1_11001 None   L33F I13V, K14R, Q18H, M36I, R41K, R57K, H69K, L89M  
A1_11038 A1_11038 None    L10V, I13V, G16E, E35D, M36I, R41K, L63T, H69K, L89M  
A1_1862 A1_1862 None    I13V, M36I, R57K, L63P, H69K, L89M  
A1_43307 A1_43307 None    L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M  
A1_5102 A1_5102 None    K14R, G16E, L19I, E35D, M36I, R41K, H69K, K70KR, L89M  
A1_7_69 A1_7_69 None  M46I, I84V, L90M L33LF L10V, I13V, K14R, I15V, K20IV, E35G, M36I, N37D, F53I, R57K, I62V, H69Q, A71T, T74S, L89I  
A1_9029 A1_9029 None    I13IV, M36I, R41K, L63LP, I64M, H69K, L89M, I93L  
AE_02007 AE_02007 None    I13V, E35D, M36I, R41K, H69K, L89M  
AE_02063 AE_02063 None    E35D, M36I, L63T, H69K, L89M  
AE_04007 AE_04007 None    I13V, I15V, Q18H, M36L, N37S, R41K, R57K, H69K, K70R, L89M  
AE_04058 AE_04058 None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
AE_05008 AE_05008 None    I13V, E35D, M36I, R41K, H69K, L89M  
AE_05050 AE_05050 None    I13V, E35D, M36I, R41K, H69K, L89M  
AE_07008 AE_07008 None    L10M, I13V, K14R, E35D, M36I, R41K, L63T, H69K, K70R, L89M  
AE_07097 AE_07097 None    I13V, I15IV, E35D, M36I, R41K, R57K, H69K, L89M  
AE_07961 AE_07961 None    Q7R, I13V, K14R, E35D, M36I, R41K, H69K, L89M  
AE_09039 AE_09039 None    L10I, I13V, G16GE, K20I, E35D, M36I, N37D, R41K, H69K, L89M, F99L  
AE_12001 AE_12001 None    L10V, K14R, E35D, M36I, R41K, L63S, H69K, L89M  
AE_20434 AE_20434 None    I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M  
AE_38590 AE_38590 None    L10LI, I13V, E35D, M36I, R41K, R57RK, H69K, L89M  
AE_48299 AE_48299 None    L10I, I13V, G16GE, K20R, E35D, M36I, R41K, K43R, R57K, I62IV, L63LP, H69K, A71AV, L89M, I93IL, F99L  
AE_55389 AE_55389 None    L10V, I13V, K14R, G16E, E35D, M36I, N37D, R41K, R57K, D60E, H69K, L89M, I93L  
AE_6053 AE_6053 None    I13IV, I15V, E35D, M36I, R41K, D60E, H69K, L89M  
AG_01_99 AG_01_99 None   F53FL I13V, K14R, G17E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M, I93L T96I 
AG_02050 AG_02050 None   K43T I13V, K14R, K20I, E35K, M36I, R41K, H69K, L89M  
AG_03030 AG_03030 None    I13V, I15IV, K20I, M36I, R41K, I64M, H69K, L89M  
AG_04010 AG_04010 None    T12K, I13A, K20V, E35D, M36I, R41K, Q61H, H69K, L89M  
AG_04050 AG_04050 None    I13V, K14R, G17E, K20I, M36I, N37D, H69K, L89M  
AG_06028 AG_06028 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
AG_06_01 AG_06_01 None    I13V, K20I, M36I, R41K, H69K, L89M  
AG_06_02 AG_06_02 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M  
AG_07011 AG_07011 None    I13AV, K14R, L19LP, K20I, M36I, R41K, L63LP, I64IM, H69K, L89M  
AG_07107 AG_07107 None    I13V, K14R, G16GE, K20I, M36I, R41K, H69K, K70KR, L89M  
AG_08560 AG_08560 None    I13V, K14R, G16E, K20I, M36I, R41K, I64ILM, H69K, K70R, L89M  
AG_09109 AG_09109 None    L10LI, I13V, I15IV, L19LP, K20I, E35N, M36I, R41K, K43R, H69K, K70R, L89M  
AG_11086 AG_11086 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
AG_46989 AG_46989 None    T12TA, I13A, K14R, K20I, M36I, R41K, H69K, L89M  
AG_6023 AG_6023 None    I13V, K20I, E34T, M36I, P39L, R41K, H69K, L89M  
AG_89011 AG_89011 None    I13V, K14R, I15IV, K20I, E35D, M36I, N37NS, R41RK, L63S, I64M, H69K, L89M  
AG_9539 AG_9539 None    I13V, K14R, G16E, K20I, M36I, P39S, L63P, H69K, L89M, F99L  
C_01002 C_01002 None    M36I, N37K, R41N, L63P, H69K, L89M, I93L  
C_02026 C_02026 None    T12A, I15V, L19I, E35D, M36I, R41K, L63S, H69K, L89M, I93L  
C_03033 C_03033 None    T12S, I15V, L19I, N37S, R41K, L63P, H69KQ, V82I, L89M, I93L  
C_03045 C_03045 None    I15V, L19I, M36I, N37E, H69K, L89M, I93L  
C_04_35 C_04_35 None    T12S, I15V, G16E, L19I, R41K, H69K, T74A, V77I, L89M, I93L  
C_04_78 C_04_78 None    I15V, N37K, R41I, D60E, Q61N, H69K, L89M, I93L  
C_05_11 C_05_11 None    V11VI, T12S, I15V, L19V, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
C_07051 C_07051 None    I15V, M36I, R41K, L63P, H69K, I93L  
C_08096 C_08096 None    I15V, L19I, M36I, R41K, K45KR, L63T, E65D, H69K, I93L  
C_09032 C_09032 None    K14R, G16E, M36I, R41K, H69K, L89M, I93L  
C_09069 C_09069 None    T12S, I15V, L19IT, K20R, M36I, R41K, Q61E, L63P, H69Q, V77I, I93L  
C_11029 C_11029 None    T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74A, L89M, I93L  
C_331442 C_331442 None    L10LIM, T12S, I15V, L19T, E35D, M36I, R41K, L63T, H69K, I93IL  
C_418844 C_418844 None    I15V, M36I, R41K, H69K, V82I, L89M, I93L  
C_419009 C_419009 None    T12S, I15V, M36I, R41K, L63P, H69K, I93L  
C_585440 C_585440 None    T12P, I15V, L19I, E35D, M36I, N37ND, R41K, L63T, H69K, A71T, I93L  
D_00_02 D_00_02 None    R8P, T12S, I13V, E35D, M36I, R41K, R57RK, Y59YF, Q61H V11S 
D_03028 D_03028 None    E35D, M36IL, N37DE, R41K, K45R, R57K, D60E, L63P, I64V, H69Q  
D_04065 D_04065 None    Q7E, I15V, M36I, R41K, I72IV  
F_05073 F_05073 None    L10V, E35D, M36I, R41K, K43R, R57K, Q61N, I72T, L89M  
F_11052 F_11052 None    L10V, I15V, G16R, K20R, E35D, M36X, N37X, L38LMV, P39S, R41K, L89M, I93V  
F_11053 F_11053 None    L10V, T12TK, I15V, G16E, K20R, E35D, M36V, P39S, R41K, L89M, I93V  
G_00_57 G_00_57 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
G_03_66 G_03_66 None    I13V, K14KR, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
G_05072 G_05072 None    L10I, I13V, I15V, K20I, M36I, R41K, L63AT, C67S, H69Q, V82I, L89M  
G_08_17 G_08_17 None    I13V, K14R, I15IV, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
G_08_73 G_08_73 None    L10M, I13V, K14R, K20I, E35Q, M36I, R41K, K55KR, R57K, L63A, C67E, H69K, V82I, L89M  
G_08_88 G_08_88 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
G_09058 G_09058 None    T4S, I13V, L19LI, K20I, E35D, M36I, R41K, I64L, C67S, H69K, V82I, L89M  
G_09_96 G_09_96 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M  
i22_08058R i22_08058R None    L10I, I13V, G16GE, Q18QE, E35N, M36I, N37D, R41K, H69K, L89M  
i9_05068 i9_05068 None    I13V, K14R, K20I, M36I, R41K, H69K, K70KR, V82VI, L89M  
iAG_0088R iAG_0088R None    K14R, K20R, E35D, M36I, N37D, R41K, H69K, K70R, L89M  
iAG_07_96R iAG_07_96R None    I13V, K14R, K20I, M36I, N37S, R41K, K43R, L63S, H69K, K70R, V82I, L89M  
iAG_09075 iAG_09075 None    L10I, I13V, G16A, K20R, M36I, R41K, K43R, H69Q, L89M  
iAG_10087 iAG_10087 None    I13V, K14R, I15IV, K20I, E35D, M36I, R41K, L63P, H69K, L89M  
iAG_10098R iAG_10098R None    I13V, K14R, L19P, K20I, M36I, R41K, I64IM, H69K, K70KR, L89M  
iAG_5016R iAG_5016R None    L10IM, I13V, K20R, M36I, R41K, K43KR, H69Q, L89M, F99L  
iH_07089 iH_07089 None    I13V, K14R, G16E, K20I, E35D, M36I, N37E, R41K, H69K, K70R, V77I, L89M  
NA_00_36 NA_00_36 None    I13V, K14R, K20I, M36I, R41K, D60E, L63P, H69K, I72IT, L89M  
NA_01010 NA_01010 None    L10I, I13V, E35D, M36I, R41K, D60E, L63T, C67Y, H69K, V77I, L89M  
NA_04_51 NA_04_51 None    I13V, K14R, K20I, E35D, M36I, R41K, L63H, H69K, V82I, L89M  
NA_08_53 NA_08_53 None    L10I, I13V, G16E, L19P, K20I, E35EG, M36I, N37NS, P39PS, R41K, K43R, L63A, C67Y, H69K, K70R, I72M, L89I  
NA_98781 NA_98781 None    L10I, V11I, T12TA, I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69Q, L89M  

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