Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Delatorre (2017)
Title High HIV-1 diversity and prevalence of transmitted drug resistance among antiretroviral-naive HIV-infected pregnant women from Rio de Janeiro, Brazil.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 87
NumPts 87
Subtype B, F, CRF12_BF, C, CRF02_AG, D

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
12BRRJGN01 12BRRJGN01 None    I13V, G17E, K20R, E35D, M36I, R41K, R57K, Q61N, E65D, L89M  
12BRRJGN02 12BRRJGN02 None  M46I K20T I13V, I15V, L19LV, N37D, R41K, R57K, I64V, T74S, I93L  
12BRRJGN03 12BRRJGN03 None    T12S, I15V, L19I, E35D, M36I, R41K, R57K, Q61N, V77I, R87RK, L89M, I93L  
12BRRJGN04 12BRRJGN04 None    L10I, K14R, I15V, G17E, L63P, K70R, L89F  
12BRRJGN05 12BRRJGN05 None    L10I, I13V, G16E, L63X, I64V, I72T, V77I, I93L  
12BRRJGN06 12BRRJGN06 None    L19I, M36MI, I64V  
12BRRJGN07 12BRRJGN07 None    L10I, E35D, R41K, I64V, H69Y, I93L  
12BRRJGN08 12BRRJGN08 None    L5LF, K14R, L23LF, R41K, K43R, I62V, L63C, G68E, A71V, I72V, V77I, I93L  
12BRRJGN09 12BRRJGN09 None    T12S, K14R, I15V, E35D, N37S, R41K, D60DE, I62IV, L63P, E65ED, K70KR  
12BRRJGN10 12BRRJGN10 None    K14R, G16E, E35D, N37D, L63T, I64V, E65D, I72V  
12BRRJGN11 12BRRJGN11 None    I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, L89M G68Q 
12BRRJGN12 12BRRJGN12 None  M46L  Q18H, A22AV, N37C, L63M, I64V, A71V, I72T, I93L  
12BRRJGN13 12BRRJGN13 None    I13V, L63P, V77I, I93L  
12BRRJGN14 12BRRJGN14 None  M46L  K14R, G16E, R41K, Q61N, L63T, C67S, I72T, V77I  
12BRRJGN15 12BRRJGN15 None    T12LS, K14KT, I15V, L19I, E35D, M36I, R41K, R57K, Q61N, V77I, L89M, I93L  
12BRRJGN16 12BRRJGN16 None    L10I, K14Q, I15V, E35D, M36I, N37H, R41K, R57K, Q61N, L63T, E65D, I93L  
12BRRJGN17 12BRRJGN17 None    I13V, K14R, N37S, R41K, Q61D, V82I  
12BRRJGN18 12BRRJGN18 None    L10I, I13V, K14R, M36I, N37ND, R41RK, L63T, I64V, H69Q, I72T  
12BRRJGN19 12BRRJGN19 None    I13V, M36L, N37K, R41N, D60E, I62V, L63E, I64V, E65D  
12BRRJGN20 12BRRJGN20 None    G17E, N37S, L63T, I64V, E65D, K70R, I72V, V77I  
12BRRJGN21 12BRRJGN21 None    I13V, I15V, M36I, R57K  
12BRRJGN22 12BRRJGN22 None    K14R, I15V, I64V, C67Y  
12BRRJGN23 12BRRJGN23 None    T12A, I15V, E35D, M36I, P39Q, R41K, R57K, Q61N, I62IV, L63T  
12BRRJGN24 12BRRJGN24 None    I13V, I15V, N37D, L63P, H69Q  
12BRRJGN25 12BRRJGN25 None    T4S, L10V, K14R, I15V, G17E, M36MI, K45R, L63P, L89F, T91TI, I93L  
12BRRJGN26 12BRRJGN26 None  M46L  T4P, I13V, I15IV, G17D, E35D, N37HY, R57K, L63P, I64V, H69R, K70R  
12BRRJGN27 12BRRJGN27 None    G16E, L63T, I72T, V77I  
13BRRJGN28 13BRRJGN28 None    L10V, I15V, G17E, K20M, L63T, E65D, I72V  
13BRRJGN29 13BRRJGN29 None    L63P, I72E, V77I  
13BRRJGN30 13BRRJGN30 None    I15V, L19I, K43KR, I62V, L63S, V77I  
13BRRJGN31 13BRRJGN31 None  M46L  K14R, N37S, Q61E, L63P, C67D, H69K, V77I  
13BRRJGN32 13BRRJGN32 None    L33I, M36I, Q61E, L63P, I72T, I93L  
13BRRJGN33 13BRRJGN33 None    R41K, L63A, I64L, H69Q, V77I  
13BRRJGN34 13BRRJGN34 None    E35D, I62V, L63S, A71T, I72T, V77I  
13BRRJGN35 13BRRJGN35 None    L10I, I15V, E35D, M36I, R41K, R57K, Q61N, L63G, I72T, I93L  
13BRRJGN36 13BRRJGN36 None    T12K, K14N, I15V, G16E, E35D, M36I, R41K, R57K, D60E, Q61D, I62V, I72R  
13BRRJGN37 13BRRJGN37 None    T12S, I15V, Q18R, E35D, M36I, R41K, R57K, Q61N, L63C, I93L  
13BRRJGN38 13BRRJGN38 None    T12A, I15V, L19I, I62V, H69Q, V82I, I93L  
13BRRJGN39 13BRRJGN39 None    G17E, R57K, L63P, K70KR, V77I, I93L  
13BRRJGN40 13BRRJGN40 None    I13V, L19LI, N37C, L63P, I72V, V77I  
13BRRJGN41 13BRRJGN41 None    T12E, K14R, E35D, M36I, R41K, R57K, Q61N, L89M  
13BRRJGN42 13BRRJGN42 None    E35D, M36I, R41K, R57K, Q61N, E65D, L89M  
13BRRJGN43 13BRRJGN43 None    I13V, N37T, R41K, L63P, I72V  
13BRRJGN44 13BRRJGN44 None    I13V, I15V, K20M, E35D, M36I, R41K, R57K, Q61N, I62V, L63X, H69Y, I72E, T74S, L89M  
13BRRJGN45 13BRRJGN45 None    T12I, K14R, I15V, L19LI, M36MIL, R41K, R57K, D60DE, L63PT, I64V, K70T, I72T  
13BRRJGN46 13BRRJGN46 None    E35D, N37S, I62V, L63P, V77I, I93L  
13BRRJGN47 13BRRJGN47 None    I13V, K14R, I15V, M36I, N37K, R41N, H69K, L89M, I93L  
13BRRJGN48 13BRRJGN48 None  D30N Q58E, N88D I15V, K20R, E35D, M36V, P39Q, R41K, R57K, D60E, Q61D, L63P, V75I, I93L  
13BRRJGN49 13BRRJGN49 None    T12PS, I15V, L19LQ, M36I, N37K, R41N, D60DE, Q61E, L63P, H69K, L89I, I93L  
13BRRJGN50 13BRRJGN50 None    I15V, G16E, E35D  
13BRRJGN51 13BRRJGN51 None    L10I, I15V, L63T, H69Q, V77I  
13BRRJGN52 13BRRJGN52 None    T12S, I15V, L19T, N37S, I62V, L63P, K70R, V77I  
13BRRJGN53 13BRRJGN53 None    L10V, I15V, G17E, E21EK, M36MI, L63T, V77I, L89F, I93L  
13BRRJGN54 13BRRJGN54 None   L10LFI T12TK, K14E, E35D, M36I, R41K, R57K, Q61D, L63T, E65K, I93L  
13BRRJGN55 13BRRJGN55 None    K14KR, I15V, G16E, E35D, P39S, I62V, L63P, A71T, I72IL  
13BRRJGN56 13BRRJGN56 None    I13V, I15IV, N37S, L63P  
13BRRJGN57 13BRRJGN57 None    T12TA, M36I, N37K, R41K, I62V, L63P, A71AV, V77VI, P79PS, I93L  
13BRRJGN58 13BRRJGN58 None    N37A, R57K, D60E, Q61E, L63P, K70T, V77I, I93L  
13BRRJGN59 13BRRJGN59 None    L10V, I15V, M36MI, N37NS, R41RK, I62V, I64V, C67W  
13BRRJGN60 13BRRJGN60 None    K14KR, L33V, N37E, P39S, D60E, L63P, H69K, A71T  
13BRRJGN61 13BRRJGN61 None    L10V, I13V, R57K, D60N, Q61E, I62V, L63P, I64V, H69Q, V77I  
13BRRJGN62 13BRRJGN62 None    G16GE, E35D, N37T, R57RK, I62IV, L63LHP, I64IV, I72IV, V77VI  
13BRRJGN63 13BRRJGN63 None    T12S, K14N, I15V, L19I, E35D, M36I, R41K, R57K, Q61N, V77I, L89M, I93L  
13BRRJGN64 13BRRJGN64 None    I13V, I15V, L19M, E35D, M36I, R41K, R57K, D60E, Q61E, I62V, L63P, V77I, L89M  
13BRRJGN65 13BRRJGN65 None    T12K, N37S, R41K, I64V, V77I  
14BRRJGN66 14BRRJGN66 None    I13V, K20R, M36I, N37D, R57K, V82I, L89M Q7QP 
14BRRJGN67 14BRRJGN67 None    I15V, G17E, K20R, M36I, I62V, L63S, H69HY, V75VI, V77VI  
14BRRJGN68 14BRRJGN68 None  M46L  K14R, N37S, Q61D, L63ST, C67D, H69K, V77I  
14BRRJGN69 14BRRJGN69 None    I15V, L19I, M36I  
14BRRJGN70 14BRRJGN70 None    M36MI, N37S, R57K, L63P, I72V  
14BRRJGN71 14BRRJGN71 None    T12A, K14KR, I15V, E35D, M36I, R41K, R57K, Q61N, L89M  
14BRRJGN72 14BRRJGN72 None    T12S, L19I, N37A, L63A, V77I  
14BRRJGN73 14BRRJGN73 None    I13V, G16E, N37K, R41K, D60E, I62V, L63E, I64V, E65D, I72LM, V77I  
15BRRJGN74 15BRRJGN74 None    I13IV, I15V, K20R, M36I, N37D, R57K, I62V, L63P, K70E, A71AV, I93L  
15BRRJGN75 15BRRJGN75 None    E35D, M36I, N37S, R57RK, L63P, I64L, I72V  
15BRRJGN76 15BRRJGN76 None    L10I, I15V, E35D, M36I, P39PQ, R41K, R57K, Q61N, L63T, E65D, I72IV, I93L  
15BRRJGN77 15BRRJGN77 None    T12S, I15V, L19T, K20R, L23LF, M36I, N37K, R41N, Q61E, H69K, L89M, I93L  
15BRRJGN78 15BRRJGN78 None    I13V, I15V, L19I, M36MI, Q61QK, I62IV, L63PS Y59YS 
15BRRJGN79 15BRRJGN79 None    K14KI, I15IV, R41K, L63H, H69HY  
15BRRJGN80 15BRRJGN80 None    L10LV, I13IV, I15IV, G16A, L19LI, M36IL, N37S, R41K, K43KR, L63A, H69K, L89LM, I93L  
15BRRJGN81 15BRRJGN81 None    T12S, I13V, K14R, I15IV, G16E, Q18L, K20M, E35D, M36I, R41K, R57K, D60E, Q61D, L63N, I72T, L89M P81PT 
15BRRJGN82 15BRRJGN82 None    G17E, N37S, L63T, I64V, E65D, K70R, I72V, V77I  
15BRRJGN83 15BRRJGN83 None    I15IV, E35D, I62T, L63P, A71T  
15BRRJGN84 15BRRJGN84 None    I15V, E35D, M36I, R41K, I62V, L63P, V77I  
15BRRJGN85 15BRRJGN85 None    T12S, I13V, K14R, I15V, G16E, Q18L, K20M, E35D, M36I, R41K, R57K, D60E, Q61D, L63N, I72T, R87RK, L89M F53FS 
15BRRJGN86 15BRRJGN86 None    L10I, I15V, E35D, M36I, N37D, R41K  
15BRRJGN87 15BRRJGN87 None    K14R, I15V, L19I, M36I, N37E, R41N, D60N, I62V, L63V, H69K, L89M, I93L  

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