Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Li (2011)
Title High genetic diversity of HIV-1 was found in men who have sex with men in Shijiazhuang, China.
Citation Infect Genet Evol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 15
NumPts 15
Subtype CRF01_AE, B, CRF07_BC

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
1102 1102 None None  V106I E6D, V118I, K122E, I135T, E169D, I195T, F214L, V245M, I257L, V261I, K277R, T286A, A288S, I293V, E297H, I329L, F346C, M357T, A376T, K385R, T386I, A400T, K431Q, A437V, E449D, S468T, L469I, H483Q, Q524E, A554S  
1104 1104 None None  V106I V35I, K102R, V118I, K122E, I135T, E169D, I202V, F214L, V245L, V261I, T286A, A288S, I293V, E297H, P313Q, I329L, G333E, M357T, V365I, S379G, K385R, T386I, A400T, E432D, V435I, E449D, S468T, L469I, S519N, A554S, V559I  
1105 1105 None None   E6D, K11T, V35T, T39K, K43E, K102R, K122E, D123N, S162C, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, E291D, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, H483HY, K512R, L517T, S519N, Q524E, A534S  
1106 1106 None None  V106I, V108I P4T, E6D, V8I, V118I, D121H, K122E, I135T, T165I, E169D, G196E, E203K, F214L, V245M, V261I, V276I, A288S, V292I, I293V, E297K, K311R, D324E, I329L, M357T, V372L, A376T, T386I, A400T, V435G, E449D, S468T, K527Q, K530R, V559I  
1107 1107 None None   E6D, K11T, V35T, T39R, K43E, D123N, S162C, K173S, Q174K, D177E, E203D, Q207A, R211S, K238R, V245K, E248D, T286A, E291D, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390KR, A400T, T403M, N447S, R461RK, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S  
1109 1109 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123G, S162C, D177E, I178M, E203D, Q207A, R211S, K238R, V245E, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, H483Q, L491S, K512R, L517A, S519N, Q524E, A534S, K550R  
1110 1110 None None  V106I E6D, K20R, V118I, K122E, I135T, E169D, D192N, T200A, R211K, F214L, V245M, V261I, K277R, T286A, A288S, I293V, E297H, M357T, A376T, K385R, T386I, A400T, E432D, A437V, E449D, S468T, L469I, H483Y, A554S, I556V  
1111 1111 None None   E28K, K32E, V35T, E36A, T39DE, S48T, V60I, A98S, K102R, D121Y, K122E, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V, I326V, G335D, T338S, R356K, G359T, T377LM, K390R, A400T, E404D, E432D, V435A, A437V, N447S, L452I, Q464K, D471E, Q480H, H483C, L491S, S519N, K530R, A534S, A554S K374KE 
1112 1112 None None   E6D, K11ST, V35T, T39K, K43EQ, S68G, K102R, K122E, D123N, S162C, P170S, K173R, Q174K, D177E, I178M, E203D, Q207A, R211S, K238R, V245E, A272P, T286A, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376S, T377IL, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S  
1113 1113 None None   E6D, K11T, V35T, T39R, K122E, D123S, S162C, K173S, Q174K, D177E, I178M, E203D, Q207A, R211S, K238R, V245E, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, S379G, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q520QK, Q524E, A534S  
1114 1114 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V, G335D, T338S, R356K, G359T, T377M, K390R, A400T, E404D, V435G, A437V, L452I, Q464K, D471E, Q480H, H483Y, L491S, S519N, K530R, A534S, A554S  
1116 1116 None None   E6D, K11T, V35T, T39K, K43E, K102R, K104R, K122E, D123N, S162C, Q174R, D177E, I178M, E203D, Q207A, R211S, K238R, V245K, T286A, I293V, E297A, E312T, V317T, I326V, I329V, G335D, R356K, M357K, G359S, K366R, A371V, K388R, K390R, A400T, T403M, T419TI, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S, V559I  
1118 1118 None None  V106I K122E, I135T, I142IT, E169D, I202V, F214L, V261I, T286A, A288S, I293V, E297H, I329L, G333E, M357T, A360V, V372I, A376T, K385R, T386I, K390R, A400T, E449D, V466A, S468T, L469I, L517I, A554S  
1119 1119 None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, V276I, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, P345Q, M357K, G359S, K366R, A371V, K390R, K395R, A400T, E432D, N447S, R448K, D460N, R461K, V466A, D471E, T477S, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
1121 1121 None None  V106I V118I, K122E, I135IT, E169D, I202V, F214L, V261I, T286A, A288S, I293V, E297H, P313T, D324DE, I329L, G333E, M357T, I375IV, K385R, T386I, A400T, E449D, V466A, S468T, L469I, A554S  

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