Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Han (2015)
Title Development of an HIV-1 subtype panel in China: isolation and characterization of 30 HIV-1 primary strains circulating in China.
Citation PLoS ONE
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 27
NumPts 27
Subtype B, CRF01_AE, C, G

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
BJ2006001 BJ2006001 Unknown    V31I, L101I, M154L, K156N, V201I, S230N, D278N  
BJ2010001 BJ2010001 None    K14R, V31I, I72A, T112V, T124A, T125A, V126M, G134N, I135V, K136R, V165I, D167DE, H171HQ, G193E, V201I, I208M, L234I, S283G  
BJ2010002 BJ2010002 None   A128T K14R, L101I, K111R, I113V, T125P, G193E, V201I  
BJ2010003 BJ2010003 None    V31I, K42Q, H51HQ, L101I, T112V, T124A, T125A, I135L, K136Q, K160KR, V201I, L234S, S255R, R269K, D278A, S283G  
GD2005003 GD2005003 Unknown    V88I, A91T, L101I, S119R, T124N, T125S, K156N, K211R  
GD2005004 GD2005004 Unknown    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I  
GD2005025 GD2005025 None    K14R, A21T, A23V, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136QR, D167E, V201I, L234I, S283G  
GD2005028 GD2005028 None    L28I, L45I, L68M, G70E, V88I, A91T, L101I, T112A, S119R, T124N, T125A, K156N, L172LF, R187K, K211R  
GX2005002 GX2005002 None    K14R, A21T, A23V, N27NS, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, V165VI, D167E, V201I, L234I, S283G  
GX2005016 GX2005016 None    K14R, A21T, A23V, V31I, S39N, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
GX2006185 GX2006185 Unknown    K14R, A21T, A23V, V31I, S39SN, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
HN2002024 HN2002024 Unknown    S17N, L68I, K71Q, V88I, A91T, L101I, S119R, T124N, T125A, K156N, E157EK, I162V, K211R  
HN2010001 HN2010001 None    K14R, L28I, L45I, V88I, A91T, L101I, S119R, T125S, K156N, K211R  
HN2010002 HN2010002 None    S17C, G70E, V88VI, A91S, L101I, S119R, T124N, T125A, I135V, I141V, K156N, I203M, K211R, D278N  
HN2010003 HN2010003 None    S17C, V88I, A91T, L101I, S119R, T125S, K156N, K211KR, Q216H, D286N  
HN2010004 HN2010004 None    K7KR, S17N, L28I, S39C, L45LIV, L68V, V88I, A91T, L101I, S119R, T124N, T125S, K156N, V176X, K211R, V281VL, A282X, S283SG, D286N Q177QK, D256DG, C280CF 
HN2010005 HN2010005 None    S17N, L28I, L45I, V88I, A91T, L101I, S119R, T124N, T125S, K156N, K211R S39CW 
NX2005012 NX2005012 None    S17N, L68V, K71Q, V88I, A91T, S119R, T124N, T125A, K156N, L172LF, K211R, D286N  
SD2006001 SD2006001 Unknown    E10X, H16P, S17N, N18X, V31LM, S39SN, K71Q, V88I, Y99F, L101I, S119R, T125S, K156N, T210TN, K211R, R224RW E11V, H12PR, E13E*, K14KT, A23APS, Q62QH, L104IM, T122TN, A175AST 
SD2010001 SD2010001 None    K14R, V31I, M50L, I72V, T112V, T124A, T125A, K127R, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
SD2013001 SD2013001 None  P145PS S153SF K14R, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
SD2013005 SD2013005 None    R20K, V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, D278A, S283G  
SD2013008 SD2013008 None    E11D, K14R, V31I, I72V, I84V, T112V, T124A, T125A, G134N, I135V, K136R, I161T, D167E, R187K, V201I, L234I, S283G  
SH2007052 SH2007052 Unknown    K14R, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, S255N, D256E, I268L, R269K, D278G, V281M, S283G  
SX2010001 SX2010001 Unknown    R20RK, V88I, A91T, L101I, S119R, T124N, T125S, K156N, I203M, K211KR, V249VI, R284G, D288N  
XJ2010001 XJ2010001 None    K14R, V31I, K42Q, I84M, L101I, G106A, T112V, T124A, T125A, I135L, K136Q, E152EK, V201I, L234S, R269K, D278A, S283G  
ZJ2006001 ZJ2006001 Unknown    E10ED, N18NH, A23AS, V31L, K42Q, I84M, L101I, T112V, T124A, T125A, K136Q, E138D, V201I, L234I, D278A, S283G K14S, M22MT 

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