Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Xu (2008)
Title Genetic diversity of integrase (IN) sequences in antiretroviral treatment-naive and treatment-experienced HIV type 2 patients.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 11
NumPts 11
Host Human

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
1005731 1005731 None    T60V, I72V, I84V, I172V, T206A, A215T, K219R, L220F, E246D, D256E, I267V I28L, N30K, A41T, S93T, I133V, E167D, I180V, S197A, F212Y, D222N, H280N 
1005732 1005732 None    L2I, K4R, S163N, I172V, L250I, G278S V19I, I28L, N30T, A41T, I180V, S197A, D222N, I259V, S279P, H280N 
1007272 1007272 None    S39T, I72V, I84V, I172V, A215T, K219R, E246D, L250I, I268V, R269K V19I, N30K, A41T, N55D, S93T, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L 
1008260 1008260 None    L2I, K4R, S23T, N30Q, S39T, T60V, A215R, K219N, L220F, R224Q, E246D, L250I, G278S V19I, I180V, S197A, D222N, F227Y, I259V, I260V, M275L 
1009629 1009629 None  S138T  S39T, I172M, T206A, E246D, L250I V19I, S23A, I28L, N30K, A41T, I180V, S197A, D222N, F227Y, I259V, M275L, H280N 
1009823 1009823 None    S39T, H51R, I72V, I84V, I172V, A215T, K219R, D232G, E246D, L250I, I268V, R269K V19I, N30K, A41T, N55D, K71T, S93T, I133V, I135M, E167D, I180V, S197A, D222N, I259V, I260V, M275L 
1022838 1022838 None  S138T  K4R, Y15F, S23T, N30Q, S39T, I50V, T60V, P90S, T206A, E246D, L250I, G278S, R284G V19I, L58I, A119S, I180V, S197A, D222N, I259V, I260V, M275L, S279P 
1034429 1034429 None  S138T  S17G, S23V, N30Q, S163D, I175V, S218L, L220F, D222T, R224Q, L250I, D256E, D270H, G278S, S279A, L281M, G283D, D286V R34K, A41D, Q42K, S93T, E125D, I133V, I165L, E167D, N170V, T171S, I180T, S197A, I201V, F227Y, V251I, I259V, I260V, Q273K, M275L, H280D, E285Q 
1048808 1048808 None    K4R, S39T, S163D, I172V, E246D, L250I, G278S I28L, R34K, N55D, E57A, L58V, S93T, Q96H, I180V, S197A, D222N, I259V, I260V, Q273K, S279P, H280N 
1048809 1048809 None    K4R, S39T, I72V, I172V, I180A, T206A, Q214H, E246D, L250I, G278S K20Q, I28L, N30K, L58V, D222N, I259V, I260V, S279P 
115887 115887 None    S39T, I172V, E246D, L250I E167D, I180V, D222N, I259V