Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Youngpairoj (2014)
Title Reference panel of cloned HIV-2 plasmid DNA for nucleic acid assay development, evaluation, and quality monitoring.
Citation J Clin Virol
SelectedGene IN
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 11
NumPts 11
Host Human

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
310072 310072 None  S138T  S17G, S23V, N30Q, I50V, S163D, I175V, S218L, L220F, R224Q, L250I, D256E, D270H, S277C, G278S, S279A E21D, R34K, A41D, Q42K, E57D, S93T, E125D, I133V, I165L, E167D, N170V, T171S, I180T, S197A, I201V, K221Q, D222N, F227Y, V251I, I259V, I260V, Q273K, M275L 
310319 310319 None  S138T  K4N, S17G, S23V, N30Q, A41N, A56S, I72V, S163D, I175V, I180A, A215T, S218L, L220F, L250I, D256E, D270N, S277C, G278S, S279A, L281M, G283D, D286A V19I, Q42K, S93T, E125D, I133V, A153S, E167D, N170V, T171S, S197A, L200I, I201V, K221Q, D222N, F227Y, V251I, I259V, Q273K, E274D, M275L, H280D, E285Q, G287R 
60415K 60415K None    S39T, I172V, L220F, L250I N30K, I133V, E167D, I180V, D222N, V251A 
7312A 7312A None  S138T  S17G, S23V, N30Q, I50V, I72V, S163D, I175V, I180A, L213F, S218L, L220F, R224Q, L250I, D256E, D270H, S277C, G278S, G283D, D286A R34K, A41D, Q42K, S93T, E125D, I133V, E167D, N170V, T171S, S197A, I201V, K221Q, D222N, F227Y, V251I, I259V, Q273K, M275L, S279T, H280D, L281V, E285Q, G287R 
77618 77618 None    S23T, N30Q, S39T, T60V, A215R, K219N, L220F, D222K, R224Q, E246D, L250I V19I, L58I, I180V, S197A, F227Y, T255A, I259V, I260V, R262S 
7924A 7924A None  S138T  K4R, Y15F, S39T, I50T, I72V, Q91N, I133T, I172V, T206A, E246D, L250I I28L, A41P, S93T, E167D, I180V, D222N 
A1958 A1958 None    I50T, S163D, E246D, L250I V19I, I28L, N30K, R34K, I133V, I180V, S197A, D222N, T255A, I260V, K264N, R269I 
A2270 A2270 None  S138T  S39T, I72V, A119T, S163N, I172V, E246D, L250I I28L, N30K, A41T, I133V, I180V, K221Q, D222N, I259V, I260V, R262S 
GB122 GB122 None    K4R, S39T, I72V, I172V, M183L, E246D, L250I V19I, I28L, N30K, N55D, S93T, E136K, E167D, I180V, C182S, K221Q, D222N, I259V, I260V 
GB87 GB87 None    S39T, T60V, I172V, T206A, E246D, L250I I28L, N30K, I133V, N160D, I180V, S197A, D222N, T255A 
SLRHC SLRHC None  S138T  S39T, R164K, I172M, Q214H, S218L, E246D, L250I I28L, N30K, S93T, I133V, I180T, S197A, D222N, I260V, K264N, R269T 

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